New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 2374524 = | 35 (0.570) | 15 (0.270) +GAAG |
3/90 | NT | 26.0% | coding (536/783 nt) | tatD | DNase, magnesium‑dependent |
? | Exported | 2940907 = | 58 (0.940) | coding (554/999 nt) | fecC | iron‑dicitrate transporter subunit |
TTACCGGTTGGGTTTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2374542‑2374524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCCAGTAAAAGATGCCGT > Exported/2940907‑2940925 |||| TTACCGGTTGGGTTAGCGAGAAGAGCCAGTAAAAGA < 1:4290858/36‑1 TACCGGTTGGTTTAGCGAGAAGAGCCAGTAAAAGACGCAGT < 1:4281735/41‑1 TACCGGTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGT < 1:315000/41‑1 ACCGGTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCa > 1:1569305/1‑37 ACCGGTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGT > 1:221378/1‑40 ACCGGTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGT > 1:311424/1‑40 ACCGGTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGT > 1:4638053/1‑40 ACCGGTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGT > 1:5203469/1‑40 ACCGGTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGC > 1:181526/1‑37 CGGTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGT < 1:296584/38‑1 CGGTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGT < 1:3476691/38‑1 GTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGT < 1:4304800/36‑1 GTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGT < 1:5605238/36‑1 TTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGT < 1:3815422/35‑1 TTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGT < 1:5464082/35‑1 |||| TTACCGGTTGGGTTTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2374542‑2374524 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGCCAGTAAAAGATGCCGT > Exported/2940907‑2940925 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |