| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | Exported | 1,306,806 | A→T | 8.0% | S264T (TCT→ACT) ‡ | yeeF ← | predicted amino‑acid transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 1,306,806 | 0 | A | T | 8.0% | 246.1 / 11.0 | 87 | S264T (TCT→ACT) ‡ | yeeF | predicted amino‑acid transporter |
| Reads supporting (aligned to +/- strand): ref base A (35/45); new base T (3/4); total (38/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01 | |||||||||||
ACCTGGAACGCTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGATCAG > Exported/1306736‑1306869 | aCCTGGAACGCTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCgaga < 1:2673531/71‑1 (MQ=255)aCCTGGAACGCTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCgaga < 1:3553011/71‑1 (MQ=255) ccTGGAACGCTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCgagag < 1:3851691/71‑1 (MQ=255) gAACGCTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGatat > 1:1236384/1‑71 (MQ=255) gAACGCTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGata < 1:573287/70‑1 (MQ=255) gAACGCTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGata < 1:4785482/70‑1 (MQ=255) aCGCTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATcc > 1:5049038/1‑71 (MQ=255) aCGCTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATcc > 1:162130/1‑71 (MQ=255) cGCTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCg > 1:3102021/1‑71 (MQ=255) cTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCggg < 1:4552386/71‑1 (MQ=255) cTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCggg < 1:822299/71‑1 (MQ=255) cTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCgg > 1:4128342/1‑70 (MQ=255) tACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAg > 1:4307789/1‑71 (MQ=255) aCCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGa > 1:2237705/1‑68 (MQ=255) cccGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGt < 1:3252854/70‑1 (MQ=255) cccGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGt < 1:5312918/70‑1 (MQ=255) cccGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGt < 1:2705401/70‑1 (MQ=255) ccGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTAc < 1:1880987/71‑1 (MQ=255) gCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAg > 1:2175576/1‑71 (MQ=255) ccgaCGTACAGCGCAATTTCAGGCAGTGCGGCATCCGGATCTTTAAAGCGGCTGATATCGGGAAAGAACAg > 1:822451/4‑71 (MQ=255) cAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATcc > 1:1540982/1‑59 (MQ=255) cAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATcc > 1:3197634/1‑59 (MQ=255) cAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATcc > 1:890862/1‑59 (MQ=255) gaCGTACAGCGCAATTTCAGGCAGTGCGGCATCCGGATCTTTAAAGCGGCTGATATCGGGAAAGAACAGCt < 1:5173562/70‑1 (MQ=255) gaCGTACAGCGCAATTTCAGGCAGTGCGGCATCCGGATCTTTAAAGCGGCTGATATCGGGAAAGAACAGCt < 1:2339057/70‑1 (MQ=255) aCGTACAGCGCAATTTCAGGCAGTGCGGCATCCGGATCTTTAAAGCGGCTGATATcgg < 1:5658846/58‑3 (MQ=255) aCGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTg < 1:5211381/71‑1 (MQ=255) cGTACAGCGCAATTTCAGGCAGTGCGGCATCCGGATCTTTAAAGCGGCTGATATCGGGAAAGAACACCt < 1:5491982/69‑1 (MQ=255) cGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGata > 1:1467903/1‑53 (MQ=255) gTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTg > 1:932665/1‑69 (MQ=255) gTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTg > 1:4251213/1‑69 (MQ=255) tACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTa > 1:2815789/1‑62 (MQ=255) cAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCg > 1:5664669/1‑53 (MQ=255) cAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAgg < 1:5340198/70‑1 (MQ=255) cAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGa < 1:592404/71‑1 (MQ=255) cATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCggg < 1:1238806/52‑1 (MQ=255) cATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCg < 1:3252306/50‑1 (MQ=255) cATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGaagt < 1:2356876/71‑1 (MQ=255) aTGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGaagta < 1:1585551/71‑1 (MQ=255) aTGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGaagta < 1:3349690/71‑1 (MQ=255) aTGATATCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGatat > 1:1107097/1‑46 (MQ=255) tGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGaagtaa < 1:1787441/71‑1 (MQ=255) aaTTTCAGGCAGTGCGGCATCCGGATCTTTAAAGCGGCTGATATc > 1:1029696/2‑45 (MQ=255) tttCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATcc < 1:4894783/44‑1 (MQ=255) ttCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATcc < 1:1675781/43‑1 (MQ=255) tCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTg > 1:3531869/1‑70 (MQ=255) tCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTg > 1:2886708/1‑70 (MQ=255) aGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCaa < 1:837780/71‑1 (MQ=255) ggCTGTGACGCATGCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCaaa < 1:3197313/71‑1 (MQ=255) tgtgACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGaa > 1:5084163/1‑56 (MQ=255) tgtgACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGaa > 1:3547518/1‑56 (MQ=255) tgACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGAt < 1:1297932/69‑1 (MQ=255) tgACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGAt < 1:1530049/69‑1 (MQ=255) tgACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGAt < 1:1573416/69‑1 (MQ=255) tgACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATg < 1:4858311/70‑1 (MQ=255) gACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGaa > 1:5426419/1‑38 (MQ=255) gCATCCGGATCTTTAAAGCGGCTGATATCGGGAAAGAAc > 1:5155977/1‑39 (MQ=12) gCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGaa > 1:895273/1‑50 (MQ=255) tCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCaaa < 1:5295727/59‑1 (MQ=255) tCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCa < 1:5386380/57‑1 (MQ=255) tCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCa < 1:1245659/57‑1 (MQ=255) tCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAg < 1:633966/66‑1 (MQ=255) tCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCAt < 1:4635857/71‑1 (MQ=255) cGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAg > 1:5350938/1‑36 (MQ=255) cGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCaaa > 1:4232053/1‑57 (MQ=255) cGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGa > 1:3518418/1‑62 (MQ=255) cGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATg < 1:1048858/70‑1 (MQ=255) gATCTTTAAAGCGAGAGATATCCGGGAAGTACAGc > 1:343508/1‑35 (MQ=255) tCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATgccgc > 1:2417629/1‑70 (MQ=255) cTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATgccgcc > 1:4550932/1‑70 (MQ=255) tttAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGAt > 1:3015784/1‑54 (MQ=255) tttAAAGAGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGAt > 1:5669920/1‑54 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATgccgcc < 1:1528210/67‑1 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATgccgc > 1:3816531/1‑66 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATgccgc > 1:3553765/1‑66 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGccgccg < 1:867860/68‑1 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGccgccg < 1:932968/68‑1 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGccgccg < 1:4123230/68‑1 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGccgccg < 1:3588404/68‑1 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGa < 1:3007535/69‑1 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGAt < 1:5459875/70‑1 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGAt > 1:4633378/1‑70 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGAt < 1:4230961/70‑1 (MQ=255) tAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGAt < 1:3846685/70‑1 (MQ=255) aaaGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGATc > 1:2415711/1‑70 (MQ=255) aaGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGa < 1:412353/55‑1 (MQ=255) aaGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGATCa < 1:4086339/70‑1 (MQ=255) aaGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGATCa < 1:1473492/70‑1 (MQ=255) aaGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGATCAg < 1:2851323/71‑1 (MQ=255) aaGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGATCAg < 1:2568976/71‑1 (MQ=255) agaTATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAg > 1:3462770/1‑47 (MQ=255) | ACCTGGAACGCTTTACCCGCAACGTACAGCATGATTTCAGGCTGTGACGCATCCGGATCTTTAAAGCGAGAGATATCCGGGAAGTACAGCTGCAGGAAGTAAGTTGCAAAGATGAAGATCATGCCGCCGATCAG > Exported/1306736‑1306869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |