| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 1942762 = | 32 (0.640) | 3 (0.070) | 3/94 | NT | 9.2% | coding (588/1323 nt) | yebA | predicted peptidase |
| ? | AP009048 | 1942786 = | 30 (0.650) | coding (564/1323 nt) | yebA | predicted peptidase | |||||
TTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1942835‑1942762‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAAAACCGTTAGCGGCAGTACGG > AP009048/1942786‑1942855 TTAAAATGCCCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGC > 1:2367270/1‑71TTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGC > 1:1970657/1‑71TTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGC > 1:776150/1‑71TTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGC > 1:3941452/1‑71 AAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT < 1:2580865/71‑1 AAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT < 1:622386/71‑1 CAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT > 1:737462/1‑64 CAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT > 1:439176/1‑64 GCGAAATGCAGCAAGGAGAGT‑GCTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT > 1:2146146/1‑61 TGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT < 1:901526/56‑1 TGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCT < 1:1778356/54‑1 AGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT < 1:2795613/44‑1 TGGGTTAACAATCTGCTGAAATGTACCGTCGGGGGAAGCTTT < 1:4232742/42‑1 TTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGC < 1:2820673/35‑1 AACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT < 1:4148890/36‑1 TGAAAGGTACCGTCGGGGGAAGCTTTCAGCAGATTGTTAACCCACTCTCCTTGCTGCAT < 1:4307755/59‑1 AAAGGTACCGTCGGGGGAAGCTTTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTT > 1:3323595/1‑59 AGGTACCGTCGGGGGAAGCTTTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTT > 1:3717095/1‑70 TTTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTT < 1:3773361/50‑1 TTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAAAACCGTTAGCGGCAGTACG > 1:4562821/1‑71 TTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAA > 1:746811/1‑52 TTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTT > 1:4220575/1‑37 TTCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTT > 1:894484/1‑37 TCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAAAACCGTTAGCGGCAGTAa < 1:480500/69‑2 TCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAAAACCGTTAGCGGCAGTACGG > 1:845991/1‑71 TTAAAATGACCAGCGAAATGCAGCAAGGAGAGTGGGTTAACAATCTGCTGAAAGGTACCGTCGGGGGAAGCTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/1942835‑1942762‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctttCAGCAGATTGTTAACCCACTCTCCTTGCTGCATTTCGCTGGTCATTTTAAAACCGTTAGCGGCAGTACGG > AP009048/1942786‑1942855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |