New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AP009048	= 2199347	43 (0.860)	3 (0.060)	3/96	NT	6.8%	coding (1714/2034 nt)	metG	methionyl‑tRNA synthetase
	?	AP009048	= 2199369	42 (0.890)					coding (1736/2034 nt)	metG	methionyl‑tRNA synthetase

AGCCGCTGCCGCGCCGGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AP009048/2199289‑2199347 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaACTTTAGCGAAGTCGTCAAAGGTGATGGTTTCCTGAATCGGATCATCTGCCAGCGGGCCAGTTACCGGC  <  AP009048/2199369‑2199301                                                                                                                                  AGCCGCTGCCGCGCCGGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATC                                                                        >  1:2786816/1‑58         CCGCGCCGGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCAT                                                                         >  1:1615114/1‑49              CCGGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCAACTTTAGCGAAGTCGT                                                       <  1:1147694/62‑1                GGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCAACTTTAGCGAAGTCGTCA                                                     >  1:613650/1‑62                                              TCAGGAAACCATCAACTTTAGCGAAGTCGTCAAAG                                                  >  1:2019232/1‑35                                                          CAACTTTAGCGAAGTCGTCAAAGGTGATGGTTTCCTGAAT                                 >  1:2277894/1‑40                                                           AACTTTAGCGAAGTCGTCAAAGGTGATGGTTTCCTGAATCGGATCATCTGCCAGCGGGCCAGTTACCGGC  <  1:2163615/70‑1                                                           AACTTTAGCGAAGTCGTCAAAGGTGATGGTTTCCTGAATCGGATCATCTGCCAGCGGGC             >  1:1865145/1‑59                                                                                                                                  AGCCGCTGCCGCGCCGGTAACTGGCCCGCTGGCAGATGATCCGATTCAGGAAACCATCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AP009048/2199289‑2199347 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcaACTTTAGCGAAGTCGTCAAAGGTGATGGTTTCCTGAATCGGATCATCTGCCAGCGGGCCAGTTACCGGC  <  AP009048/2199369‑2199301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.