| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 215622 | 46 (0.750) | 38 (1.350) +TTTAATATCAGTAAACCGGACATAACC |
20/46 | NT | 62.3% | coding (732/732 nt) | dnaQ | DNA polymerase III epsilon subunit |
| ? | Exported | 2705182 = | 54 (0.880) | intergenic (+106/‑1) | damX/dam | hypothetical protein/DNA adenine methylase | |||||
Only 100 of 114 total aligned reads displayed.
GATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/215553‑215622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG > Exported/2705182‑2705251 ||||||||||||||||||||||||||| TTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:3093770/71‑1 TTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:2262444/71‑1 TTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTT < 1:3025739/71‑1 TTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATT < 1:1412759/70‑1 GCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAA > 1:2032740/1‑71 AGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAA < 1:2567993/69‑1 CTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATC < 1:159459/71‑1 CTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATC < 1:1158086/71‑1 TCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATAT > 1:2273717/1‑69 ATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAG > 1:3266555/1‑70 ATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAG > 1:2524615/1‑70 TGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTA < 1:394418/71‑1 GCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACC > 1:3557287/1‑71 GTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGAC < 1:2571264/71‑1 GTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGA > 1:28148/1‑70 TCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACA > 1:90185/1‑71 TCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATAT < 1:1767250/57‑1 CTCGATCTGGTGCAGAAGAAAGGAGGAAGTTGCCTCTGGCGAGCATAATTTAA > 1:520860/1‑53 TCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACAT > 1:328751/1‑70 CTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCA > 1:3359151/1‑52 AGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAAC > 1:3391162/1‑51 AGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAAC > 1:903648/1‑51 AAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGG < 1:3473443/52‑1 AAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGG < 1:1380493/52‑1 AAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAAC < 1:575058/49‑1 AAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAAC < 1:1012775/49‑1 AGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAA < 1:2931416/71‑1 AGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAA < 1:1980104/71‑1 AGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAA < 1:1051950/71‑1 AGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAA > 1:3749336/1‑71 AGAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAA < 1:456873/71‑1 GAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAAT > 1:2751683/1‑71 GAAAGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATA < 1:2772242/55‑1 AGGCGGAAGTTGCCTCTGGCGAGCATAATTTAATAT < 1:574710/36‑1 GGCGGAAGTTGCCTCTGGCGAGCATAATTTAATAT < 1:3807861/35‑1 GGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTT > 1:782280/1‑71 GGAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTT > 1:1779631/1‑71 GAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTT < 1:1891912/71‑1 GAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTT < 1:1358497/71‑1 GAAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTT < 1:213371/71‑1 AAGTTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTT < 1:18323/71‑1 TTGCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATG < 1:2154354/50‑1 TGCCTCTGGCAAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTT > 1:1799291/1‑69 TGCCTCTGGCAAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTATTTT > 1:2793894/1‑69 GCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG > 1:2535574/1‑69 GCCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG > 1:3487163/1‑69 CCTCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTT < 1:2994136/66‑1 TCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTG > 1:3688052/1‑71 TCTGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGT > 1:2575094/1‑70 CTGGCGAGCATAATTTAATATCAGTAAACCGGACAT > 1:2748435/1‑36 TGGCGTGCATAATTTAATATCAGTAAACCGTACATAACCCATGAAGAAAAATCGCGCTTTTT < 1:2873700/62‑1 TGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGG > 1:880287/1‑71 TGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTG < 1:3824866/69‑1 TGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTG < 1:815910/69‑1 TGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTG < 1:2011392/69‑1 TGGCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTT < 1:49211/62‑1 GCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGC < 1:923549/70‑1 GCGAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGA > 1:162657/1‑63 GCGAGCATAATTTAATATCAGTAAACCGGACATAA > 1:2856992/1‑35 GCGAGCATAATTTAATATCAGTAAACCGGACATAA > 1:2784060/1‑35 GCGAGCATAATTTAATATCAGTAAACCGGACATAA > 1:1297134/1‑35 GAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGG < 1:1902434/71‑1 GAGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGG < 1:517424/71‑1 AGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAA > 1:2022190/1‑61 AGCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAA > 1:408674/1‑61 GCATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGG > 1:2867863/1‑71 CATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGG > 1:3418747/1‑71 ATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGC < 1:2807299/71‑1 ATAATTTAATATCAGTAAACCGGACATAACCCATGAAGAA < 1:11290/40‑1 TAATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAA > 1:2336475/1‑41 AATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGA < 1:810667/55‑1 AATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG < 1:196314/54‑1 AATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG < 1:2073249/54‑1 AATTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG < 1:1601272/54‑1 TTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG > 1:1591791/1‑70 TTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAG > 1:2235067/1‑70 TTTAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAA < 1:1365260/69‑1 TAATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGG < 1:2400515/56‑1 TAATATCAGTAAACCGGACATAACCCATGAAGAAAAAT > 1:1674327/1‑38 TAATATCAGTAAACCGGACATAACCCATGAAGAAAAAT > 1:1536020/1‑38 ATATCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTT > 1:614515/1‑47 TCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCC < 1:2377271/70‑1 TCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCC < 1:3167500/70‑1 TCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCC > 1:3184169/1‑70 TCAGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTG < 1:1476387/45‑1 AGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAA > 1:2707540/1‑45 AGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAA > 1:1074871/1‑45 AGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAA > 1:58998/1‑45 AGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAA > 1:1319880/1‑45 AGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAA > 1:1888002/1‑45 AGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAA > 1:1401127/1‑45 AGTAAACCGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAA > 1:3421833/1‑45 CGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGA < 1:17223/71‑1 CGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGA > 1:2778029/1‑71 CGGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGA > 1:1076401/1‑71 GGACATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATat > 1:2070157/1‑68 ATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTA < 1:1228117/71‑1 ATAACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATT > 1:3460696/1‑70 ACCCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAAC > 1:3301048/1‑71 CCATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG > 1:33706/1‑71 ||||||||||||||||||||||||||| GATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/215553‑215622‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATGAAGAAAAATCGCGCTTTTTTGAAGTGGGCAGGGGGCAAGTATCCCCTGCTTGATGATATTAAACGG > Exported/2705182‑2705251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |