| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 443799 | 37 (0.660) | 3 (0.080) | 3/66 | NT | 9.0% | intergenic (‑60/‑108) | panE/yajQ | 2‑dehydropantoate reductase, NADPH‑specific/predicted nucleotide binding protein |
| ? | AP009048 | = 443811 | 37 (1.020) | intergenic (‑72/‑96) | panE/yajQ | 2‑dehydropantoate reductase, NADPH‑specific/predicted nucleotide binding protein | |||||
ACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/443713‑443799‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcccttaattgtgcatAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGCGGGTGAGGAG < AP009048/443811‑443745 ACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTA > 1:4520735/1‑71ACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTA < 1:4610134/71‑1ACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCT > 1:2412697/1‑70 GCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCC > 1:4347292/1‑71 GCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCC > 1:3053140/1‑71 GCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTAACC > 1:1322905/1‑71 TCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTA > 1:3024010/1‑65 CCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAA < 1:3919699/71‑1 CCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAA > 1:3636878/1‑71 CCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAA < 1:1801907/71‑1 CCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAA < 1:3428590/71‑1 CCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAA < 1:4630254/71‑1 CCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTA > 1:2501577/1‑70 CCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCC > 1:4188234/1‑66 ATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTG < 1:3231786/71‑1 CGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTG < 1:696860/70‑1 ATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGC < 1:4670864/66‑1 ATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTA < 1:241483/52‑1 ATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTA < 1:235181/52‑1 ATTTTCATTGATCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGC < 1:1356887/66‑1 TTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAA > 1:4327462/1‑57 CTCACCCGCAACCACTCCGGGTGTTCAATAAGGCT > 1:4051347/1‑35 ACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATAGTCGCAACAGCATGCACAATT < 1:764077/71‑1 ACCCGCAACCACTCCGGGTGTTCAATAAGGCTACCCCTTAATTGTGCATAGTCGCAACAGCATGCACAAT > 1:592002/1‑70 CCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGT < 1:788656/44‑1 GCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCATAGTCGCAACAGCATGCACAA > 1:1175637/1‑65 CTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGC > 1:4065197/1‑36 ATCCCTTAATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGT > 1:4093122/1‑71 TCCCTTAATTGTGCATAGTCGCAACAGCATGCACAA > 1:1218192/1‑36 CCCTTAATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTT > 1:3704667/1‑70 CCCTTAATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTT > 1:38922/1‑70 CCTTAATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGC < 1:534989/71‑1 CCTTAATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGC < 1:1261169/71‑1 CCTTAATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGC > 1:4074331/1‑71 CCTTAATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTG < 1:4799720/70‑1 CTTAATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTG < 1:2352477/52‑1 TAATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGA > 1:399015/1‑51 TAATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGA > 1:3102924/1‑51 AATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGCGGGT > 1:2323486/1‑71 ATTGTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGCGGGT < 1:4199088/70‑1 GTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGCGGGTGAG < 1:4243127/70‑1 GTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGCGGGTGAG > 1:114815/1‑70 GTGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATT > 1:3264564/1‑44 GTGCATAGTCGCAACAGCATGCACAATTAAAGGATAGCCTTATTGAACACCCGGAGTGGTTGCGGGTGA > 1:4682938/1‑69 TGCATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGCGGGTGAGGA < 1:4176185/71‑1 CATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGCGGGTGAGGAG > 1:4842589/1‑70 CATAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGCGGGTGAGGAG < 1:4067546/70‑1 TAGCCGCAACAGCATGCACAATTAAGGGATAGCCTT < 1:3604668/36‑1 ACCGCATCCCAATACGGTAATTTTCATTGTTCCTCCTCACCCGCAACCACTCCGGGTGTTCAATAAGGCTATCCCTTAATTGTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/443713‑443799‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tatcccttaattgtgcatAGTCGCAACAGCATGCACAATTAAGGGATAGCCTTATTGAACACCCGGAGTGGTTGCGGGTGAGGAG < AP009048/443811‑443745 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |