| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2727295 = | NA (NA) | 4 (0.080) | 4/94 | NT | NA | noncoding (546/2904 nt) | rrlG | 23S ribosomal RNA |
| ? | AP009048 | 2727314 = | NA (NA) | noncoding (527/2904 nt) | rrlG | 23S ribosomal RNA | |||||
CGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2727366‑2727295‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC > AP009048/2727314‑2727383 CGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACACGCAGTGGGAGCACGCT < 1:2379872/71‑1CGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:221201/71‑1CGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:1853355/1‑71 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:1067535/71‑1 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:3927338/71‑1 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:5113872/71‑1 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:3956850/71‑1 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:3212895/1‑70 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:4333995/1‑70 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:1502935/1‑70 AAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:4477769/1‑68 AACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:3870131/65‑1 AACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:2450285/64‑1 CCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGC < 1:4959191/59‑1 CGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGC < 1:1894549/58‑1 GGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACG < 1:4771631/56‑1 CGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:3170560/56‑1 CGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:543836/56‑1 GGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:4795368/52‑1 TGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:4317299/48‑1 TGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGC < 1:113722/46‑1 AAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:2322294/45‑1 AAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:1577559/45‑1 AAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:2213700/45‑1 AAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:4405004/1‑43 AAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:390257/1‑42 CCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:4222021/38‑1 CTGAAACCGTGTACGTACAAGCAGTGGGAGCACGC < 1:2040461/35‑1 TGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:2820440/36‑1 GAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:2323268/35‑1 ACGTACAAGCAGTGGGAGCATGCTTAGGCGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTT > 1:4109530/1‑71 TACAAGCAGTGGGAGCACGCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTT < 1:4293112/71‑1 ACAAGCAGTGGGAGCACGCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTT > 1:2738873/1‑71 GCAGTGGGAGCACGCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTT > 1:1716579/1‑67 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG > 1:3192125/1‑71 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG > 1:3897236/1‑71 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG > 1:5131052/1‑71 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACG > 1:4486756/1‑70 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTC > 1:3852784/1‑56 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTC > 1:2502515/1‑56 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGG > 1:1875986/1‑48 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGG > 1:923694/1‑47 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCG > 1:292592/1‑45 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCa > 1:5010047/1‑35 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGT < 1:4041977/71‑1 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGT < 1:2220418/71‑1 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGT < 1:2833066/71‑1 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGT < 1:3559463/71‑1 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG < 1:400286/70‑1 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG > 1:1838435/1‑70 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG > 1:1832540/1‑70 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG < 1:628310/70‑1 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTT > 1:1575945/1‑54 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCT > 1:2994088/1‑51 TTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCT < 1:4843683/58‑1 TTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCG < 1:3338530/40‑1 TGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC > 1:4050276/1‑71 TGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCC > 1:3112986/1‑61 TGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCC > 1:3721259/1‑61 CGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2727366‑2727295‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC > AP009048/2727314‑2727383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |