New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AP009048 | = 2970629 | 45 (0.800) | 4 (0.080) | 3/94 | NT | 9.1% | coding (377/1041 nt) | tas | predicted oxidoreductase, NADP(H)‑dependent aldo‑keto reductase |
? | AP009048 | = 2970640 | 38 (0.730) | coding (388/1041 nt) | tas | predicted oxidoreductase, NADP(H)‑dependent aldo‑keto reductase |
TATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2970579‑2970629 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTTGAGGCTGTCATGCAGCGCTTCGCGGATATTCTT < AP009048/2970640‑2970574 TATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCTGATAAAGATCGAGGT < 1:5090446/66‑1 GCATGACAGCCTCAAGCGCCTACAGACTGATTACCTGATAAAGATCGAGGTAATCA > 1:3241305/1‑56 AGCCTCAAGCGCCTACAGACTGATTACCTGATAAAGATCGAGGT < 1:469344/44‑1 GCGCCTACAGACTGATTACCTGATAAAGATCGAGGTA > 1:3749956/1‑37 ACCTGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTTGAGGCTGTCATGCAGCGCTTCGCGGATATTCTT < 1:390101/71‑1 ACCTGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTTGAGGCTGTCATGCAGCGCTTCGCGGATATTCTT < 1:469483/71‑1 ACCTGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTT < 1:3787086/38‑1 CCTGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTTGA > 1:4591917/1‑39 TATCCGCGAAGCGCTGCATGACAGCCTCAAGCGCCTACAGACTGATTACCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/2970579‑2970629 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acctGATAAAGATCGAGGTAATCAGTCTGTAGGCGCTTGAGGCTGTCATGCAGCGCTTCGCGGATATTCTT < AP009048/2970640‑2970574 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |