| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | = 3332647 | 29 (0.520) | 3 (0.060) | 3/88 | NT | 10.2% | intergenic (‑57/+70) | yhbE/rpmA | conserved inner membrane protein/50S ribosomal subunit protein L27 |
| ? | AP009048 | = 3332659 | 28 (0.580) | intergenic (‑69/+58) | yhbE/rpmA | conserved inner membrane protein/50S ribosomal subunit protein L27 | |||||
ATGCCTGCCTGCTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3332571‑3332647‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttttacATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTGCAGGGAATACGGTA < AP009048/3332659‑3332590 ATGCCTGCCTGCTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCGCCATGCGCAT > 1:4716777/1‑71ATGCCTGCCTGCTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCAT > 1:3181229/1‑71ATGCCTGCCTGCTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCAT > 1:5153378/1‑71 GCCTGCCTGCTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATT > 1:3412840/1‑70 CCTGCCTGCTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTT < 1:3635615/70‑1 CTGCCTGCTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTT < 1:4450414/71‑1 TGCCTGCTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTT < 1:3015464/70‑1 CCTGCTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTT > 1:3852536/1‑67 TGCTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCAT < 1:1527207/62‑1 TGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCAT < 1:3644120/59‑1 CTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTA > 1:4751353/1‑62 TATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACATTCGATAACCGGTAAAA < 1:3559839/71‑1 TTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTACATTCGATAACCGGTAAAAAT < 1:218519/71‑1 GATTAACGTCGCACCATGCGCATTTTTACATTCGATAACCGGTAAAA > 1:2936723/1‑47 TTTTTACATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTGCAGGG < 1:2840260/68‑1 TTTACATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTG < 1:4847793/61‑1 TTTACATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTG < 1:193743/61‑1 TTTACATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAA < 1:2584009/52‑1 TTACATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCTCAAATGCGCTTTGCAGGGAATACG > 1:1393349/1‑71 TTACATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTGCAGGGAATACG > 1:1689139/1‑71 TTACATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTGCAGGGAATACG > 1:4540295/1‑71 TTACATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTGCAGGGAATACG > 1:2413913/1‑71 TACATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTGCAGGGAATACGG > 1:4059068/1‑71 ACATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTGCAGGGAATACGG > 1:1184154/1‑70 ACATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCC > 1:2889747/1‑44 CATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTGCAGGGAATACGGTA < 1:4624850/71‑1 CATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTGCAGGGAATACGG < 1:1045742/69‑1 ATGCCTGCCTGCTGCTTCATACCGTATTCCCTGCAAAGCGCATTTGCGGATTAACGTCGCACCATGCGCATTTTTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AP009048/3332571‑3332647‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tttttacATTCGATAACCGGTAAAAATGCGCATGGTGCGACGTTAATCCGCAAATGCGCTTTGCAGGGAATACGGTA < AP009048/3332659‑3332590 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |