| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3340916 = | 74 (1.320) | 4 (0.080) | 3/88 | NT | 6.2% | coding (787/978 nt) | yrbG | predicted calcium/sodium:proton antiporter |
| ? | AP009048 | 3340944 = | 58 (1.190) | coding (815/978 nt) | yrbG | predicted calcium/sodium:proton antiporter | |||||
ACGCAAAAATAATGCTCACCAGCAACATCACGCTGTAGTCACGACTGTACGCCAGTGGATCAATCTCTCCTGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3340991‑3340916‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgtACAGTCGTGACTACAGCGTGATGTTGCTGGTGAGCATTATTTTTGCGTTGCTGTGCTGGCGGCGCT > AP009048/3340944‑3341009 ACGCAAAAATAATGCTCACCAGCAACATCACGCTGTAGTCACGACTGTACGCCAGTGGATCAATCTCTCCT > 1:5042612/1‑71 CGCAAAAATAATGCTCACCAGCAACATCACGCTGTAGTCACGACTGTACGCCAGTGGATCAATCTCTCCTG > 1:1467768/1‑71 GCAAAAATAATGCTCACCAGCAACATCACGCTGTAGTCACGACTGTACGCCAGTGGATCAATCTCTCCTGG < 1:581226/71‑1 AAATAATGCTCACCAGCAACATCACGCTGTAGTCACGACTTTACGCCAGTGGATCAATCTCTCCTGGCGT > 1:4905599/1‑70 ATAATGCTCACCAGCAACATCACGCTGTAGTCACGACTGTACGCCAGTGGATCAATCTCTCCTGGCGT > 1:4176983/1‑68 ATGCTCACCAGCAACATCACGCTGTAGTCACGACTGTACGCCAGTGGATCAATCTCTCCTGGCGT > 1:4650139/1‑65 ACATCACGCTGTAGTCACGACTGTACGCCAGTGGATCAATCTCTCC < 1:2087338/46‑1 CACGCTGTAGTCACGACTGTACGCCAGTGGATCAATCTCTCCTG > 1:2881048/1‑44 TACGCCAGTGGATCAATCTCTCCTGGCGTACAGTCGTGACTACAGCGTGA < 1:2347168/50‑1 TACGCCAGTGGATCAATCTCTCCTGGCGTACAGTCGTGACTACAGCGTGA < 1:2407601/50‑1 CGCCAGTGGATCAATCTCTCCTGGCGTACAGTCGTGCCTACAGCGTGATG > 1:2344861/1‑50 CAGTGGATCAATCTCTCCTGGCGTACAGTCGTGACTACAGC > 1:4589963/1‑41 TGGCGTACAGTCGTGACTACAGCGTGATGTTGCTGGTGAGCATTATTTTTGCGTTGCTGTGCTGGCGGCGC > 1:4519012/1‑71 TGGCGTACAGTCGTGACTACAGCGTGATGTTGCTGGTGAGCATTATTTTTGCGTTGCTGTGCTGGCGGCG > 1:2149998/1‑70 GCGTACAGTCGTGACTACAGCGTGATGTTGCTGGTGAGCATTATTTTTGCGTTGCTGTGCTGGCGGCGCT < 1:4456802/70‑1 GCGTACAGTCGTGACTACAGCGTGATGTTGCTGGTGAGCATTATTTTTGCGTTGCTGTGCTGGCGGCGC < 1:4557409/69‑1 TACAGTCGTGACTACAGCGTGATGTTGCTGGTGAGCATTATTTTTGCGTTGCTGTG < 1:1966753/56‑1 TACAGTCGTGACTACAGCGTGATGTTGCTGGTGAGCATTATTTTTG < 1:719120/46‑1 ACGCAAAAATAATGCTCACCAGCAACATCACGCTGTAGTCACGACTGTACGCCAGTGGATCAATCTCTCCTGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3340991‑3340916‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgtACAGTCGTGACTACAGCGTGATGTTGCTGGTGAGCATTATTTTTGCGTTGCTGTGCTGGCGGCGCT > AP009048/3340944‑3341009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |