| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 225092 = | NA (NA) | 5 (0.090) | 4/96 | NT | NA | noncoding (1322/1542 nt) | rrsH | 16S ribosomal RNA |
| ? | AP009048 | 225114 = | NA (NA) | noncoding (1344/1542 nt) | rrsH | 16S ribosomal RNA | |||||
TACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/225164‑225092‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCA > AP009048/225114‑225183 TACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:1056764/1‑71TACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:3111491/1‑71TACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:1156528/1‑71TACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:2092766/1‑71TACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:1273856/1‑71TACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:351592/1‑71TACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:3706766/1‑71TACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:4722440/1‑71 ACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:2423192/1‑71 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG < 1:2762227/71‑1 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG < 1:2092476/71‑1 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG < 1:3755627/71‑1 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG < 1:1460863/71‑1 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG < 1:4887158/71‑1 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG < 1:5207570/71‑1 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC < 1:784236/70‑1 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:1111217/1‑70 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:2341701/1‑70 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC < 1:3143704/70‑1 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:2245059/1‑70 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC < 1:3259657/70‑1 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC < 1:3032706/70‑1 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:4936154/1‑70 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC < 1:2694632/70‑1 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:1389951/1‑70 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:3858663/1‑70 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:4114345/1‑70 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:4219767/1‑70 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:1516740/1‑70 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:1454131/1‑70 CAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:1464868/1‑69 CAAGGCCCGGGAACGTATTAACCGTGGCATTTTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG < 1:2133422/71‑1 AAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:4900268/1‑69 AAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:938945/1‑68 AGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:2642208/1‑68 AGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:1341620/1‑68 AGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC > 1:1356335/1‑68 GGCCCGGGAACGTATTCACCGTGGCTTTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC < 1:4878400/67‑1 GGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG > 1:3707888/1‑62 GGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:3298618/1‑60 TTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG < 1:1762610/42‑1 TTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTC < 1:3167802/41‑1 TCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG < 1:1682212/41‑1 CTGATCCACGATTACTAGCGATTCCGACTTCATGGAGT > 1:1179115/1‑38 GATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG < 1:4025933/38‑1 GATCCACGATTACTAGCGATTCCGACTTCATGGAGTC < 1:4582241/37‑1 TCCACGATTACTAGCGATTCCGACTTCATGGAGTCG > 1:1482699/1‑36 GCGATTCCGACTTCATGGAGTCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCT > 1:3849798/1‑70 GCGATTCCGACTTCATGGAGTCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCC < 1:382547/69‑1 GCGATTCCGACTTCATGGAGTCGCTAGTAATCGTGGATCAGAA < 1:4684811/43‑1 GCGATTCCGACTTCATGGAGTCGCTAGTAATCGTGGATCAGAA < 1:3569455/43‑1 GATTCCGACTTCATGGAGTCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCC > 1:3953686/1‑61 TCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACAC > 1:3252024/1‑71 TCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACAC > 1:5051235/1‑71 TCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACAC > 1:1082368/1‑71 TCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCA > 1:2134553/1‑68 TCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTA < 1:2058602/54‑1 TCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTA < 1:2036922/54‑1 TCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTC > 1:3664976/1‑42 CGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACAC > 1:1056239/1‑70 CGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACAC > 1:344046/1‑70 CGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACA > 1:1943770/1‑69 CGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCG > 1:567842/1‑44 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCA < 1:4601736/71‑1 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCA > 1:3543869/1‑71 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCA > 1:2092532/1‑71 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCA > 1:3034535/1‑71 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCA < 1:2486273/71‑1 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCA > 1:1304138/1‑71 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCA < 1:3104661/71‑1 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCA < 1:727226/71‑1 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACC < 1:3062754/70‑1 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACA < 1:4426720/54‑1 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGC > 1:464673/1‑46 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCC > 1:2757947/1‑42 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCC > 1:2328162/1‑42 GCTAGTAATCGTGGATCAGAATGCCACGGTGAATAC < 1:3942109/36‑1 TACAAGGCCCGGGAACGTATTCACCGTGGCATTCTGATCCACGATTACTAGCGATTCCGACTTCATGGAGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/225164‑225092‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCA > AP009048/225114‑225183 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |