| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 2727295 = | NA (NA) | 4 (0.070) | 3/94 | NT | NA | noncoding (546/2904 nt) | rrlG | 23S ribosomal RNA |
| ? | AP009048 | 2727314 = | NA (NA) | noncoding (527/2904 nt) | rrlG | 23S ribosomal RNA | |||||
GCGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2727367‑2727295‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC > AP009048/2727314‑2727383 GCGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGC < 1:1096874/71‑1GCGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGC > 1:3759679/1‑71GCGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGC < 1:4483319/71‑1GCGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGC < 1:4727234/71‑1 CGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:943612/71‑1 CGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:2038454/71‑1 CGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:5278465/71‑1 CGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:509275/71‑1 CGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:1882939/71‑1 CGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACG > 1:702437/1‑69 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:3525427/71‑1 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:35307/71‑1 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:1456923/71‑1 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:1380141/71‑1 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:4014909/71‑1 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:4956763/70‑1 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:2654093/1‑70 GAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:5164502/1‑70 AAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:2342328/69‑1 AAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:1003273/1‑69 AAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:3563625/1‑69 AAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:4550952/69‑1 AAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT > 1:311581/1‑69 AAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACG > 1:2704384/1‑66 CCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:4721143/63‑1 CCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGC < 1:370966/61‑1 GAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:1295611/56‑1 GAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:4827674/56‑1 AGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGC < 1:1610859/53‑1 TGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT < 1:480522/48‑1 TGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:744015/47‑1 TGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:371696/47‑1 TGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:32706/47‑1 TGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:3229748/47‑1 AAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT > 1:433427/1‑46 AAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACG > 1:17755/1‑43 AAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT > 1:949869/1‑45 AAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:5324794/43‑1 AAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGC > 1:5350464/1‑42 ACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:1089527/38‑1 CCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCT < 1:3943629/37‑1 TACAAGCAGTGGGAGCACGCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCC < 1:1641312/62‑1 ACAAGCAGTGGGAGCACGCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTT > 1:3443072/1‑71 ACAAGCAGTGGGAGCACGCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTT > 1:1840423/1‑71 ACAAGCAGTGGGAGCACGCTTAGGCGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGG < 1:551522/63‑1 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG > 1:915353/1‑71 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG > 1:1691008/1‑71 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG > 1:2615103/1‑71 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG > 1:513326/1‑71 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG > 1:2336620/1‑71 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTC > 1:2444035/1‑67 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTC > 1:3694764/1‑63 GCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCAGGGGTTCTTTTCGCCTTTCACTCAC > 1:4398955/1‑69 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCTCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGT < 1:2849358/71‑1 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGT < 1:881685/71‑1 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG < 1:4203516/70‑1 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGG > 1:3314423/1‑70 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTC > 1:3539286/1‑66 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCG > 1:3113714/1‑56 CTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCACTCGCCGGGGTTCTTTTCGCCTTTCCCTCA > 1:1947051/1‑67 TTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGT < 1:1945858/47‑1 TTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGG < 1:2036652/44‑1 TGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC > 1:5023803/1‑71 TGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGC > 1:509157/1‑40 TGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTC < 1:305016/38‑1 TGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTC < 1:1508905/38‑1 GCGAAAAGAACCCCGGCGAGGGGAGTGAAAAAGAACCTGAAACCGTGTACGTACAAGCAGTGGGAGCACGCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/2727367‑2727295‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTCTTTTCGCCTTTCCCTCACGGTAC > AP009048/2727314‑2727383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |