| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3167346 = | 66 (1.130) | 3 (0.060) | 3/90 | NT | 5.0% | intergenic (‑146/+59) | ygiU/ygiV | predicted cyanide hydratase/predicted transcriptional regulator |
| ? | AP009048 | 3167365 = | 55 (1.060) | intergenic (‑165/+40) | ygiU/ygiV | predicted cyanide hydratase/predicted transcriptional regulator | |||||
ATGTGCCGTTGGCGTGATGCCTGACTCCAGCTTCCCTTATAAATTCCTGCTTCAAACTGGCGCTACTAATGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3167421‑3167346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAACGGCACATAAACATCCGTTTC > AP009048/3167365‑3167434 ATGTGCCGTTGGCGTGATGCCTGACTCCAGCTTCCCTTATAAATTCCTGCTTCAAACTGGCGCTACTAATG > 1:730154/1‑71 TGCCTTTGGCGTGATGCCTGACTCCAGCTTCCCTTATAAATTCCTGCTTCAAACTGGCGCTACTAATGCGC > 1:1244310/1‑71 TGCCGTTGGCGTGATGCCTGACTCCAGCTTCCCTTATAAATTCCTGCTTCAAACTGGCGCTACTAATGCGC < 1:1920483/71‑1 GTTGGCGTGATGCCTGACTCCAGCTTCCCTTATAAATTCCTGCTTCAAACTGGCGCTACTAATGCGC > 1:2056794/1‑67 ATGCCTGACTCCAGCTTCCCTTATAAATTCCTGCTTCAAACTGGCGCTACTAATGCGC < 1:409114/58‑1 CAAACTGGCGCTACTAATGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCA > 1:3400709/1‑67 CTGGCGCTACTAATGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAG < 1:998656/57‑1 GGCGCTACTAATGCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGC > 1:2735770/1‑57 GCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCA > 1:4922370/1‑46 GCGCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTG < 1:3817209/36‑1 GCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAACGGCACATAAACATCCGT > 1:358222/1‑71 GCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAACGGCACATAAACATCCGT < 1:5355766/71‑1 GCCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGA > 1:4674117/1‑36 CCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAACGGCACATAAACATCCGTT < 1:2293700/71‑1 CCAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAACGGCACATAAACATCCGTT < 1:1207500/71‑1 CAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAACGGCACATAAACATCCGTTT < 1:3097446/71‑1 CAGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAACGGCACATAAACATCCGTTT < 1:3700323/71‑1 AGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAACGGCACATAAACATCCGTTTC < 1:341665/71‑1 AGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAA > 1:475778/1‑50 ATGTGCCGTTGGCGTGATGCCTGACTCCAGCTTCCCTTATAAATTCCTGCTTCAAACTGGCGCTACTAATGCGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3167421‑3167346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgccaGTTTGAAGCAGGAATTTATAAGGGAAGCTGGAGTCAGGCATCACGCCAACGGCACATAAACATCCGTTTC > AP009048/3167365‑3167434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |