| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP009048 | 3459685 = | NA (NA) | 3 (0.060) | 3/88 | NT | NA | coding (1053/1185 nt) | tufB | protein chain elongation factor EF‑Tu |
| ? | AP009048 | 3459719 = | NA (NA) | coding (1019/1185 nt) | tufB | protein chain elongation factor EF‑Tu | |||||
GCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3459761‑3459685‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggtaCCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACGGAGTATGACGGCCGC > AP009048/3459719‑3459788 GCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAG < 1:3218722/71‑1 CTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAG < 1:97172/70‑1 CCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGG < 1:2722003/71‑1 CCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGG < 1:1475007/71‑1 CCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGG < 1:2398909/71‑1 CCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGG > 1:1590164/1‑71 CCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGAT < 1:1303921/69‑1 CCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGAT < 1:2165484/69‑1 CCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGAT < 1:1886968/69‑1 CCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGAT < 1:1539064/69‑1 CGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGT < 1:1681679/71‑1 CGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGT < 1:4913137/71‑1 CGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGG < 1:4688694/70‑1 TCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAG < 1:4762074/64‑1 TCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAG < 1:38638/64‑1 TTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATG < 1:4651069/60‑1 CTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGT < 1:4230181/49‑1 CTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTA > 1:2325498/1‑47 CTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTA > 1:543113/1‑47 CTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGA < 1:4914481/42‑1 CTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGA < 1:442812/42‑1 TGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGT < 1:661376/45‑1 CCATCGAACTGCCGGAAGGCGTAGAGATGGTACCAGTCACGTCAGTAGTACGGAAG < 1:1010885/56‑1 TCGAACTGCCGGAAGGCGTAGAGATGGTACCAGTCACGTCAG < 1:754117/42‑1 AGGCGTAGAGATGGTACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACG < 1:2768380/71‑1 GATGGTACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACGGAGTATGAC > 1:5210717/1‑71 GATGGTACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACGGAGTATGAC < 1:1396128/71‑1 GATGGTACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGA < 1:4627267/56‑1 GATGGTACCAGTCACGTCAGTAGTACGGAAGTAGAACT < 1:619140/38‑1 GATGGTACCAGTCACGTCAGTAGTACGGAAGTAGAAC < 1:814369/37‑1 ATGGTACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACGGAGTATGACG < 1:2175059/71‑1 ATGGTACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACGGAGTATGAC < 1:4948349/70‑1 TGGTACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACGGAGTATGACGG > 1:2807863/1‑71 TGGTACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACGGAGTATGACGG < 1:936159/71‑1 GGTACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACGGAGTATGACGGC > 1:2470202/1‑71 GTACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCTGACGGTAGCCTTTGAAGAACGGAGTATGACGGC < 1:3476051/70‑1 GTACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACGGAGTATGACGGC > 1:1386412/1‑70 TACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTA < 1:4474246/43‑1 ACCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACGGAGTATGACGGCCGC > 1:1589216/1‑71 GCTACCGTCCGCAGTTCTACTTCCGTACTACTGACGTGACTGGTACCATCGAACTGCCGGAAGGCGTAGAGATGGTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AP009048/3459761‑3459685‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatggtaCCAGTCACGTCAGTAGTACGGAAGTAGAACTGCGGACGGTAGCCTTTGAAGAACGGAGTATGACGGCCGC > AP009048/3459719‑3459788 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |