New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	= 2101394	0 (0.000)	86 (1.160)	72/282	0.0	100%	intergenic (‑126/+2)	gnd/wbbL	6‑phosphogluconate dehydrogenase, decarboxylating/pseudogene, lipopolysaccharide biosynthesis protein
	?	NC_000913_3_pae_pgi	2101749 =	NA (NA)					intergenic (‑5/+146)	wbbL/insH1	pseudogene, lipopolysaccharide biosynthesis protein/IS5 transposase and trans‑activator

CGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_pgi/2101247‑2101394 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT  >  NC_000913_3_pae_pgi/2101749‑2101894                                                                                                                                                                                                                                                                                                         CGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATG                                                                                                                                                    >  1:854166/1‑149      ATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGG                                                                                                                                               <  2:267770/149‑1      ATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCCTTATGGAAGG                                                                                                                                               >  2:1156296/1‑149       TCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATCGAAGGT                                                                                                                                              >  2:40448/1‑149       TCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAATATACAAAGTACTTATTAAAGTATACATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGT                                                                                                                                              <  1:251445/149‑1        CTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTG                                                                                                                                             >  1:175205/1‑149         tcTTGATTGGACATTACATCCTCCTTTCAGGTTTGATCACCGCGCTTAATGCTCGCGGTCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGC                                                                                                                                            <  2:257268/147‑1             GCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCAGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTCCGAct                                                                                                                                        >  2:151208/1‑147              CTTGGACATTACATACTCCTGGCAGGTGTGATAGCCGCGATGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATA                                                                                                                                       <  2:1284211/149‑1               TTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAA                                                                                                                                      >  1:794733/1‑149               TTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAA                                                                                                                                      <  2:711830/149‑1                TGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGTAATGGTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGATTATATGCTTACAGCTTTATGTAAGGTGAGAATAAG                                                                                                                                     >  1:261034/1‑149                  GACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGGGCGCATAAGCG                                                                                                                                   >  1:771621/1‑149                  GACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAA                                                                                                                                                 >  1:431478/1‑135                  GACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAA                                                                                                                                                 <  2:431478/135‑1                   ACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGG                                                                                                                                  <  1:411820/149‑1                   ACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGG                                                                                                                                  <  2:428793/149‑1                      TTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGA                                                                                                                               >  1:16830/1‑149                        ACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAA                                                                                                                             <  1:72275/149‑1                           TACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTC                                                                                                                          <  2:584467/149‑1                            ACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCT                                                                                                                         >  1:444466/1‑149                                 aGTCAGGTGTGATCACCGCGTTGAATGCTCGCGGCTTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCG                                                                                                                    <  2:771621/148‑1                                   TCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGC                                                                                                                  <  2:288136/149‑1                                    CAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT                                                                                                                 <  2:175205/149‑1                                     AGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑G                                                                                                               >  1:353256/1‑149                                          TGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCA                                                                                                          <  1:564418/149‑1                                           GATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCgg                                                                                                         >  1:678428/1‑147                                            ATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTGCTTATTAAAGTATAAATAGCTTCTCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGGGGGGAAATTCTTCTCGGCT‑GAATCAGT                                                                                                        >  1:394955/1‑149                                            ATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCT                                                                                                                         >  1:1180047/1‑133                                            ATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCT                                                                                                                         <  2:1180047/133‑1                                             TCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTa                                                                                                       <  2:681531/149‑2                                                CCGCGCTGAATGCTCGCGGACTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATT                                                                                                    >  2:1104316/1‑149                                                   cgaTGAATCCTCGCGGCCCTGAATGTGCGCAAATAAGTATAAAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTTCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCA                                                                                                 <  2:379620/146‑1                                                    GCTGAATGCTCGCGGCCTGGAATGTTCGAAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCAT                                                                                                <  2:210094/149‑1                                                     CTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATT                                                                                               <  1:1055261/149‑1                                                      TGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTT                                                                                              <  2:353256/149‑1                                                         ATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTT                                                                                           >  1:715687/1‑149                                                            CTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCAT                                                                                        <  2:444466/149‑1                                                             TCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑AACTCAGTCATTTCATTTCTTCATG                                                                                       >  1:287212/1‑149                                                              CGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTTTTCATGT                                                                                      >  1:290055/1‑149                                                                   CCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATAGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAG                                                                                 <  1:355941/149‑1                                                                    CTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCAGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGC                                                                                <  1:780066/149‑1                                                                    CTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGAATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTGGAGC                                                                                >  2:1201615/1‑149                                                                     TGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCC                                                                               >  2:1004013/1‑149                                                                       GAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGA                                                                             >  2:630252/1‑149                                                                            TTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTT                                                                        <  2:715687/149‑1                                                                            TTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAACGGGGAAATTCTTCTCGTCT‑GACTCAGTCCTCTCCTTTCTTCATGTTTGAGCCGATTTTT                                                                        >  1:21377/1‑149                                                                                gAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTC                                                                    <  2:1267040/148‑1                                                                                CAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTC                                                                    <  1:1004013/149‑1                                                                                 AAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCC                                                                   >  2:769620/1‑149                                                                                     AAGTATACGAAGTACTTATTAAAGTATAAATAGCGTATCAATGCTTATATGCTTACGGCTTTATGGAAGGTACGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCGGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTA                                                               >  2:17530/1‑149                                                                                          TACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTCAATGC                                                          >  2:632849/1‑149                                                                                          TACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGC                                                          >  1:1080660/1‑149                                                                                            CAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCT                                                        <  2:1080660/149‑1                                                                                             AAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTT                                                       >  2:1084511/1‑149                                                                                             AAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTT                                                       <  1:1003310/149‑1                                                                                             AAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTT                                                       >  1:1187557/1‑149                                                                                                    TTAATAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGAGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAG                                                <  2:1064363/149‑1                                                                                                       TTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGGGAATCAGCGGGGAAATTATTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGGTTTTTTGTTCCGTAGATGGCTTGAATGAGCCT                                             >  1:129282/1‑149                                                                                                       TTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCT                                             <  1:930263/149‑1                                                                                                       TTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCAGTAAATGCCTTGAATAAGCCT                                             >  1:111981/1‑149                                                                                                            GTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTA                                        >  1:410010/1‑149                                                                                                             TATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAG                                       <  1:630252/149‑1                                                                                                                  agAGCGTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCATTCATTTCATTTCTTCATGTTTGAGCCGATTTTATCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGT                                  <  2:129282/147‑1                                                                                                                     GCTTATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTC                               >  1:565389/1‑149                                                                                                                        TATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTTCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTC                            <  2:119384/149‑1                                                                                                                        TATCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTC                            <  1:232288/149‑1                                                                                                                        TATCCATGCGTATATGATTACGGCTTTATCGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTC                            <  1:464804/149‑1                                                                                                                          TCCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCGTCTCGGAT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCCTCGt                          <  2:997920/149‑2                                                                                                                           CCATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCC                         >  1:121984/1‑149                                                                                                                            CATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTC                                                                                             >  2:832730/1‑80                                                                                                                            CATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTC                                                                                             <  1:832730/80‑1                                                                                                                             ATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCAT                       >  2:1079071/1‑149                                                                                                                             ATGCTTATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGCTTCTTCGCCAT                       >  2:59808/1‑149                                                                                                                                  TATATGCTTACGTCTGTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GATTTAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAG                  <  2:1247209/149‑1                                                                                                                                  TATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAG                  >  1:895442/1‑149                                                                                                                                   ATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTC                               >  2:550606/1‑135                                                                                                                                   ATATGCTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTC                               <  1:550606/135‑1                                                                                                                                        CTTACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTA            >  2:365275/1‑149                                                                                                                                          TACGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTCAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATC          <  1:865711/149‑1                                                                                                                                            CGGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCC        <  1:1287147/149‑1                                                                                                                                             GGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTGAAAGCCTTGATTCAGCCTATGTTGACCGTTTCTTCGCCATTTATGTCGTgaggccc       >  1:103225/1‑142                                                                                                                                             GGCTTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCC       >  1:308129/1‑149                                                                                                                                              GCTTTATGGAAGGTGCGAATCAGAGGGGGAATGCTTTTAGGCTAAACCCAG‑GATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCA      <  1:632849/149‑1                                                                                                                                                TTTATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGACT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGT    <  1:717392/149‑1                                                                                                                                                  TATGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT  <  2:503976/149‑1                                                                                                                                                                                                                                                                                                         CGCCGATCTGTTGCTTGGACATTACATACTCCTGTCAGGTGTGATCACCGCGCTGAATGCTCGCGGCCTGGAATGTTCGCAAATAAGTATACAAAGTACTTATTAAAGTATAAATAGCTTATCCATGCTTATATGCTTACGGCTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_pae_pgi/2101247‑2101394 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCT‑GACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTT  >  NC_000913_3_pae_pgi/2101749‑2101894

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.