BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_pae_pgi	4218568 =	89 (1.110)	1664 (22.200)	245/248	-0.0	95.2%	intergenic (+155/‑28)	aceA/aceK	isocitrate lyase/isocitrate dehydrogenase kinase/phosphatase
*	?	NC_000913_3_pae_pgi	= 4253290	NA (NA)	1664 (22.200)	245/248	-0.0	95.2%	noncoding (130/130 nt)	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site

Only 100 of 2110 total aligned reads displayed.

GACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTgccggatgcggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/4218724‑4218568

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agagaattGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATGCCAGTAACTCA  <  NC_000913_3_pae_pgi/4253290‑4253129

  CAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGTCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGA                                                                                                                                                                         <  1:100739/150‑1

   AGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAG                                                                                                                                                                        >  4:531203/1‑150

   AGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAG                                                                                                                                                                        >  1:719664/1‑150

          CAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCC                                                                                                                                                                 >  3:566026/1‑150

            GTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGG                                                                                                                                                               >  2:395302/1‑150

             TCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATACCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGA                                                                                                                                                              >  3:156003/1‑150

                 CCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCG                                                                                                                                                          <  3:483427/150‑1

                 CCTGTTCGAAACACTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGATTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGTAGCAGAGAATTGCCGGATGCG                                                                                                                                                          >  1:688325/1‑150

                     TTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGA                                                                                                                                                      >  1:379488/1‑150

                       CGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATATAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAA                                                                                                                                                    >  4:213007/1‑150

                         AAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAAC                                                                                                                                                  >  3:252713/1‑150

                         AAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAAC                                                                                                                                                  <  4:421623/150‑1

                         AAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAAC                                                                                                                                                  >  2:89942/1‑150

                          AACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACG                                                                                                                                                 <  4:103370/150‑1

                           ACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGC                                                                                                                                                <  4:293221/150‑1

                           ACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGC                                                                                                                                                <  2:615172/150‑1

                               TGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTA                                                                                                                                            >  4:187461/1‑150

                                GCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTAT                                                                                                                                           >  3:80172/1‑150

                                    CGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                                                                                       <  3:343075/150‑1

                                     GCACCGGAGGTCACTTCGGGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                                                                                      <  2:456819/150‑1

                                     GCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                                                                                      <  2:86604/150‑1

                                      CACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCC                                                                                                                                     >  3:380162/1‑150

                                         CGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTC                                                                                                                                  <  3:133320/150‑1

                                         CGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCAACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGCAAACGCCTTATCCGGCCTTC                                                                                                                                  >  2:659898/1‑150

                                          GGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCC                                                                                                                                 <  3:106679/150‑1

                                           GAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAACAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCA                                                                                                                                >  1:651141/1‑150

                                            AGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCAT                                                                                                                               >  3:210183/1‑150

                                             GGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATA                                                                                                                              <  2:781774/150‑1

                                                CACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATC                                                                                                                           <  4:7989/150‑1

                                                  CTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTG                                                                                                                         <  2:55305/150‑1

                                                   TTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGGATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGC                                                                                                                        <  1:246860/150‑1

                                                   TTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGC                                                                                                                        >  4:331833/1‑150

                                                   TTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGC                                                                                                                        >  4:163236/1‑150

                                                        GGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATT                                                                                                                   <  3:451457/150‑1

                                                        GGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCAGCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATT                                                                                                                   <  4:500365/150‑1

                                                         GAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTC                                                                                                                  >  2:229019/1‑150

                                                           ATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAA                                                                                                                <  3:281432/150‑1

                                                           ATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAA                                                                                                                <  3:314442/150‑1

                                                            TCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAAT                                                                                                               >  4:375037/1‑150

                                                               ACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAA                                                                                                            >  2:811119/1‑150

                                                               ACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGC                                                                                                                                                                  <  1:402842/96‑1

                                                               ACCATACTGAGCATAGAAGCCTTGAAAAATGGTTTGAGCAATCAATAATCACAGGCAACGCGGCATTGAGCGCCCTCAGCAGGGGCAGAGAATTGCCGGAGGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAA                                                                                                            >  2:525864/1‑150

                                                                  ATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTG                                                                                                         <  3:501391/150‑1

                                                                   TACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGC                                                                                                        <  1:495692/150‑1

                                                                    ACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCG                                                                                                       <  4:569740/150‑1

                                                                       GAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATG                                                                                                    >  3:359626/1‑150

                                                                           ATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTG                                                                                                                                                                   <  1:66306/83‑1

                                                                           ATCGAAGCCTTGCAAAATGATTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCACTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTCTCCGGCCTTCGTTAATCTGCAAATTCAATAAATTGCGATGTGTT                                                                                                <  2:264404/150‑1

                                                                            TCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTG                                                                                               >  2:170055/1‑150

                                                                               AAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGT                                                                                            >  1:789633/1‑150

                                                                                AGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGC                                                                                                                                                                  >  1:812494/1‑79

                                                                                   CTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGC                                                                                        <  3:400739/150‑1

                                                                                    TTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCC                                                                                                                                                                 >  2:12466/1‑76

                                                                                           ATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAG                                                                                <  1:835628/150‑1

                                                                                           ATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAG                                                                                >  1:626486/1‑150

                                                                                               TTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCC                                                                            >  1:363260/1‑150

                                                                                                TTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCG                                                                           >  2:744183/1‑150

                                                                                                TTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGC                                                                                                        >  3:533842/1‑121

                                                                                                      AATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATC                                                                     <  1:458836/150‑1

                                                                                                      AATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATGGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATC                                                                     >  3:239210/1‑150

                                                                                                       ATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGC                                                                        <  2:641530/146‑1

                                                                                                       ATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCATTATCCGGCCTTCCATAATCTGTAACTTCAATAAATAGCGATGTATTGTGTAGGCCTGAGAAGCGCCGCGCATCA                                                                    >  1:575688/1‑150

                                                                                                        TCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAG                                                                   >  2:71476/1‑150

                                                                                                          AATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGC                                                                 >  1:871067/1‑150

                                                                                                          AATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGC                                                                 >  1:350034/1‑150

                                                                                                            TAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAA                                                               <  1:598738/150‑1

                                                                                                                  CAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGA                                                         <  4:313811/150‑1

                                                                                                                   AGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAA                                                        <  4:549563/150‑1

                                                                                                                    GGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAG                                                       <  1:144123/150‑1

                                                                                                                      CCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTCTTGTGTAGGCCTGAGAAGCGCCGCGAATCAGGCAACCAAGAAGAA                                                     >  2:831269/1‑150

                                                                                                                        ACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAG                                                   >  4:3542/1‑150

                                                                                                                          GCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGAGAAACCCCCTTATCCGGCCTTTCATAATCTGCAAATTCAATCAATTGCGATGTGTTTTGTAGGCTTGAGAAGCGCCGCGCATCGGGGAACCCCGAAGAAAtac                                                 <  2:492757/150‑4

                                                                                                                             GCATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATGGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGA                                              <  1:555162/150‑1

                                                                                                                               ATTTAGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATG                                            >  1:183793/1‑150

                                                                                                                                   AGCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCA                                        >  2:685708/1‑150

                                                                                                                                    GCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCAT                                       >  1:435750/1‑150

                                                                                                                                    GCGCCCTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGT                                                                                            >  2:588449/1‑97

                                                                                                                                         CTCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGC                                  <  3:187461/150‑1

                                                                                                                                          TCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCT                                 <  4:449480/150‑1

                                                                                                                                          TCATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCT                                 >  1:283639/1‑150

                                                                                                                                           CATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTT                                >  4:265522/1‑150

                                                                                                                                            aaCAGGAGCAGAGAATTGCCGGAAGCGGCGAAAACGCCATATCCGGCCTTCCATAACCTGCAAATTCAATAAATTGCGATATGTTGTGTAGGCCTAAGAAGCGCCGCGCATCAAGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTT                               >  2:144126/3‑150

                                                                                                                                            ATCAGGGGCATAGAATTGCCGGATGCGGAGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAAGTGCGATGTGTTGTGTAGGCCTGAGAAGCTCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTT                               <  2:36205/150‑1

                                                                                                                                            ATCAGGAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTT                               <  4:391925/150‑1

                                                                                                                                                 GAGCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGACTGAAAAGCGACGAGCATGAGACAACCTAGAAGAAAGACGAATGATCATACGGATTTTTTAg                          >  1:32581/1‑149

                                                                                                                                                   GCAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACAT                        >  1:745701/1‑150

                                                                                                                                                    CAGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATC                       >  3:42905/1‑150

                                                                                                                                                     AGAGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCA                      >  1:524765/1‑150

                                                                                                                                                       AGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATC                    >  2:315779/1‑150

                                                                                                                                                       AGAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGACTGAGACGCGAAGAGAATCAGGCAAAAAAGAAGAAAGCCGGATAATCAACCGGCTTTTTTACATCATC                    >  1:305465/1‑150

                                                                                                                                                        GAATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCA                   <  1:211109/150‑1

                                                                                                                                                         AATTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAG                  <  4:234904/150‑1

                                                                                                                                                              CCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATG             >  2:20493/1‑150

                                                                                                                                                              CCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATG             >  2:293431/1‑150

                                                                                                                                                               CGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATGATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCCGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATGC            <  2:42154/150‑1

                                                                                                                                                                 GATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATGCCA          <  1:124365/150‑1

                                                                                                                                                                     CGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGT                                                                                            <  4:471902/64‑1

                                                                                                                                                                      GGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTGCATCATCAGAAATGCCAGTAAC     >  1:95658/1‑150

                                                                                                                                                                        CGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATGCCAGTAACTC   <  2:336272/150‑1

                                                                                                                                                                         GAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATGCCAGTAACTCA  >  4:134168/1‑150

GACAGCATGCCAGTCGGCCTGTTCGAAACGCTGCTGCGCACCGGAGGTCACTTCGAGGAATCGACCATACTGAGCATCGAAGCCTTGCAAAATGGTTTGAGCAATCAATAATTCCAGGCCACGCGGCATTTAGCGCCCTCATCAGGAGCAGAGAATTgccggatgcggcg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_pae_pgi/4218724‑4218568

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agagaattGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCATCAGGCAACCCAGAAGAAAGCCGGATGATCATCCGGCTTTTTTACATCATCAGAAATGCCAGTAACTCA  <  NC_000913_3_pae_pgi/4253290‑4253129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.