| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913_3_pae_pgi | 3,316,818 | C→G | A237P (GCG→CCG) | nusA ← | transcription termination/antitermination L factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913_3_pae_pgi | 3,316,818 | 0 | C | G | 98.5% | 450.0 / ‑6.5 | 130 | A237P (GCG→CCG) | nusA | transcription termination/antitermination L factor |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base G (65/62); total (66/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
TAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCG > NC_000913_3_pae_pgi/3316671‑3316964 | tAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGa > 1:149426/1‑150 (MQ=255) cACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGAtttt > 2:194963/1‑150 (MQ=255) ccGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAAc < 1:826663/150‑1 (MQ=255) ccGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAAc > 2:739566/1‑150 (MQ=255) ggTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCg < 3:212960/150‑1 (MQ=255) ggTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGACAACCCg > 4:353034/1‑150 (MQ=255) atcCCACAGGACGATATCGATACGCGCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATcgcg < 4:728441/150‑1 (MQ=255) tcCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGa < 3:678197/150‑1 (MQ=255) cccACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCa < 1:1170914/131‑1 (MQ=255) cccACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCa > 2:1170914/1‑131 (MQ=255) ccACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGc > 1:21109/1‑150 (MQ=255) aGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTCGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCgct < 3:499752/150‑1 (MQ=255) ggACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCgctg < 3:122033/150‑1 (MQ=255) gACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGCTTATCGTTGGCTTTCACCGGGATTTTCGCCCGAGAACCCGGATCGCGAGCCgctgc > 2:1195757/1‑150 (MQ=255) cGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCtt > 1:249342/1‑150 (MQ=255) cGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCtt > 3:434591/1‑150 (MQ=255) gATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCgctgc < 1:330651/147‑1 (MQ=255) gATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCgctgc > 2:330651/1‑147 (MQ=255) gATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCttt > 1:1008229/1‑150 (MQ=255) gATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCttt > 3:671752/1‑150 (MQ=255) atatCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTa < 1:540953/150‑1 (MQ=255) tatCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGATAACCCGGATCGCGAGCCGCTGCTTTaa < 4:621951/150‑1 (MQ=255) tCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAAtt > 3:706457/1‑150 (MQ=255) gATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTc > 4:559759/1‑150 (MQ=255) gATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTc > 2:429175/1‑150 (MQ=255) gATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTc > 1:1109594/1‑150 (MQ=255) gATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTc < 3:334391/150‑1 (MQ=255) gATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCGGCTTTAATTTc > 1:755664/1‑150 (MQ=255) aCGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAAt < 1:630777/150‑1 (MQ=255) gCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAAcc > 4:329219/1‑118 (MQ=255) gCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCa > 1:91472/1‑150 (MQ=255) gCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCa > 2:841674/1‑150 (MQ=255) cGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCActt < 4:161450/150‑1 (MQ=255) aCCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACttcttc < 4:706457/150‑1 (MQ=255) cccAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCg < 1:945764/150‑1 (MQ=255) cccAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTCTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCg > 2:264715/1‑150 (MQ=255) ccAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCActtc > 1:281365/1‑145 (MQ=255) ccAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCActtc < 2:281365/145‑1 (MQ=255) ttCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGAt < 1:739566/150‑1 (MQ=255) gTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCt < 2:176313/150‑1 (MQ=255) tAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTg < 4:671752/150‑1 (MQ=255) aGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTgg < 3:106833/150‑1 (MQ=255) aGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTgg < 1:841674/150‑1 (MQ=255) gACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGc < 2:676488/150‑1 (MQ=255) acacCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCa < 3:252558/150‑1 (MQ=255) cGCCTGAACACGCGCGCCACGCGTACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTc < 1:1149379/150‑1 (MQ=255) gCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCa > 1:1005053/1‑150 (MQ=255) tGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATa < 4:262741/150‑1 (MQ=255) tGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATa > 2:1021868/1‑150 (MQ=255) gAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATAc < 2:149426/150‑1 (MQ=255) acGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGCTTTCTGGCACTTCAATACGGaa > 2:855829/1‑150 (MQ=255) acGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGaa > 1:598706/1‑150 (MQ=255) cgcCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGtt < 2:1008229/150‑1 (MQ=255) gcCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTc > 4:416081/1‑150 (MQ=255) ccACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCg < 2:477996/150‑1 (MQ=255) cGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATc < 3:486551/150‑1 (MQ=255) gCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCa > 4:639779/1‑150 (MQ=255) aTACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGCGTTTCGCACGCGAACCCGGCTCGCGAGCCGCCGCTTTAATTTCAATCACTTCTTCGCGGATTTCTGGCACCGCAATACGGAACAGTTCGATCCGc > 2:929483/1‑150 (MQ=255) aTACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGc < 4:434591/150‑1 (MQ=255) cTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCAttt > 3:728654/1‑150 (MQ=255) gCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCgg < 2:156340/150‑1 (MQ=255) aaGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTaa > 1:647901/1‑84 (MQ=255) aaGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTaa < 2:647901/84‑1 (MQ=255) aaGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTgg > 2:534084/1‑112 (MQ=255) aaGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTgg < 1:534084/112‑1 (MQ=255) gCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTg < 1:429175/150‑1 (MQ=255) cTACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAAc < 2:1109779/150‑1 (MQ=255) tACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGCACAGTTCGATCAGCATTTCCGGCTTGGAACg > 2:568112/1‑150 (MQ=255) tACCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACg > 1:1111967/1‑150 (MQ=255) aCCGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGa < 2:231854/150‑1 (MQ=255) ccGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCgctgc < 2:832454/70‑1 (MQ=255) ccGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCgctgc > 1:832454/1‑70 (MQ=255) ccGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGcc < 1:1023410/94‑1 (MQ=255) ccGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGcc > 2:1023410/1‑94 (MQ=255) ccGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAg < 2:249342/150‑1 (MQ=255) cGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGGGt > 4:202276/1‑150 (MQ=255) cGGATCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGt > 2:904195/1‑150 (MQ=255) aTCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGAc < 2:598706/150‑1 (MQ=255) aTCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGAc > 2:1099944/1‑150 (MQ=255) aTCGATACGTTGATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGTTCGCGAGCCGCTGCTTTAAATTCAATCACTTCTACGCCGATTTCAGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGAc < 1:428068/150‑1 (MQ=255) tCGATACGTTTATCGTTGGTTTTCACCGTGATTTTCGCACGGGAGCCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTCCTTCGCCGATTTGTGGCACTTCAATACGGAACAGTTCGAGCAGCATTGCCGGCTTGGTACGAGTGACg < 4:390324/150‑1 (MQ=255) tCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACg < 1:918298/150‑1 (MQ=255) tCGATACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACg > 3:288304/1‑150 (MQ=255) tACGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGCAACGAGTGACGAACa > 2:422158/1‑150 (MQ=255) aCGTTTATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAg < 2:1109594/150‑1 (MQ=255) tATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGc > 3:428033/1‑78 (MQ=255) tATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGc < 4:428033/78‑1 (MQ=255) tATCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTgcg > 2:486862/1‑150 (MQ=255) aTCGTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCATTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGATCAGTTgcgc < 3:590055/150‑1 (MQ=255) gTTGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGcc > 2:292056/1‑150 (MQ=255) ttGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCa > 1:288232/1‑150 (MQ=255) ttGGTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCa > 1:288105/1‑150 (MQ=255) gTTTTCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCAcgc > 3:493260/1‑150 (MQ=255) tttCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGtt < 1:1003041/98‑1 (MQ=255) tttCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGtt > 2:1003041/1‑98 (MQ=255) ttCACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAAt > 2:1160988/1‑56 (MQ=255) tCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGCTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCtt < 3:639779/150‑1 (MQ=255) cACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTc < 3:559759/150‑1 (MQ=255) cACCGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTc < 3:353034/150‑1 (MQ=255) ccGGGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCg > 3:696392/1‑150 (MQ=255) | TAATCACGAACTGCGCCGGGTTATCATCCCACAGGACGATATCGATACGCTCGCCACCCAGTTCAGTAGACACCGCCTGAACACGCGCGCCACGCATACCTACGCAAGCACCTACCGGATCGATACGTTTATCGTTGGTTTTCACCGCGATTTTCGCACGAGAACCCGGATCGCGAGCCGCTGCTTTAATTTCAATCACTTCTTCGCCGATTTCTGGCACTTCAATACGGAACAGTTCGATCAGCATTTCCGGCTTGGAACGAGTGACGAACAGTTGCGCGCCACGCGCTTCCG > NC_000913_3_pae_pgi/3316671‑3316964 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |