breseq  version 0.35.4  revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal new junction evidence (sorted from low to high skew)
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 4285798427 (0.850)4 (0.010) 4/172 NT 0.80% noncoding (76/530 nt) RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences
?CP009273 4286251 = 700 (2.030)noncoding (529/530 nt) RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences
* ? CP009273 4170593 =473 (0.940)5 (0.010) 5/230 NT 1.1% coding (106/366 nt) rplL 50S ribosomal subunit protein L7/L12
?CP009273 = 4170589 425 (0.920)coding (102/366 nt) rplL 50S ribosomal subunit protein L7/L12
* ? CP009273 1292815 =545 (1.080)3 (0.010) 3/228 NT 0.64% coding (763/2676 nt) adhE fused acetaldehyde‑CoA dehydrogenase/iron‑dependent alcohol dehydrogenase/pyruvate‑formate lyase deactivase
?CP009273 = 1292811 438 (0.960)coding (767/2676 nt) adhE fused acetaldehyde‑CoA dehydrogenase/iron‑dependent alcohol dehydrogenase/pyruvate‑formate lyase deactivase
* ? CP009273 = 514495405 (0.800)4 (0.010) 3/236 NT 1.0% coding (111/810 nt) ybbO putative oxidoreductase
?CP009273 2032388 = 381 (0.800)intergenic (‑84/‑49) yedW/hiuH response regulator family protein/hydroxyisourate hydrolase
* ? CP009273 = 360286NA (NA)5 (0.010)
+AATTC		 5/240 NT 1.3% intergenic (‑220/+375) lacZ/lacI pseudogene, truncated/DNA‑binding transcriptional repressor
?CP009273 3416618 = 395 (0.790)intergenic (+65/+164) yhdZ/rrfF putative amino‑acid transporter subunit/5S ribosomal RNA of rrnD operon