mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 68 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 4611507 = | 114 (1.210) | 3 (0.030) | 3/250 | NT | 3.0% | intergenic (+88/‑79) | deoD/yjjJ | purine‑nucleoside phosphorylase/putative protein kinase |
| ? | CP009273 | 4611561 = | 88 (0.990) | intergenic (+142/‑25) | deoD/yjjJ | purine‑nucleoside phosphorylase/putative protein kinase | |||||
| * | ? | CP009273 | 4611506 = | 112 (1.180) | 4 (0.040) | 4/266 | NT | 3.8% | intergenic (+87/‑80) | deoD/yjjJ | purine‑nucleoside phosphorylase/putative protein kinase |
| ? | CP009273 | 4611562 = | 89 (0.940) | intergenic (+143/‑24) | deoD/yjjJ | purine‑nucleoside phosphorylase/putative protein kinase | |||||
| * | ? | CP009273 | 4535085 = | 113 (1.190) | 4 (0.040) | 3/260 | NT | 3.6% | coding (173/2637 nt) | fimD | fimbrial usher outer membrane porin protein; FimCD chaperone‑usher |
| ? | CP009273 | 4535141 = | 103 (1.110) | coding (229/2637 nt) | fimD | fimbrial usher outer membrane porin protein; FimCD chaperone‑usher | |||||
| * | ? | CP009273 | 4406707 = | 85 (0.900) | 3 (0.030) | 3/264 | NT | 2.9% | intergenic (‑120/‑62) | bsmA/yjfP | bioflm peroxide resistance protein/acyl CoA esterase |
| ? | CP009273 | 4406800 = | 120 (1.280) | coding (32/750 nt) | yjfP | acyl CoA esterase | |||||
| * | ? | CP009273 | = 4379159 | 89 (0.940) | 3 (0.030) | 3/254 | NT | 3.0% | coding (29/3324 nt) | mscM | mechanosensitive channel protein, miniconductance |
| ? | CP009273 | = 4379213 | 109 (1.210) | coding (965/969 nt) | psd | phosphatidylserine decarboxylase | |||||
| * | ? | CP009273 | 4338912 = | 92 (0.970) | 4 (0.040) | 4/252 | NT | 4.3% | intergenic (‑351/+220) | dcuB/dcuR | C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor/response regulator in two‑component regulatory system with DcuS |
| ? | CP009273 | 4339010 = | 91 (1.020) | intergenic (‑449/+122) | dcuB/dcuR | C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor/response regulator in two‑component regulatory system with DcuS | |||||
| * | ? | CP009273 | 4338844 = | 101 (1.070) | 4 (0.040) | 4/262 | NT | 4.1% | intergenic (‑283/+288) | dcuB/dcuR | C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor/response regulator in two‑component regulatory system with DcuS |
| ? | CP009273 | 4338923 = | 90 (0.970) | intergenic (‑362/+209) | dcuB/dcuR | C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor/response regulator in two‑component regulatory system with DcuS | |||||
| * | ? | CP009273 | = 4254880 | 95 (1.000) | 3 (0.030) | 3/254 | NT | 3.2% | coding (639/1416 nt) | dnaB | replicative DNA helicase |
| ? | CP009273 | = 4254922 | 88 (0.970) | coding (681/1416 nt) | dnaB | replicative DNA helicase | |||||
| * | ? | CP009273 | 4253588 = | 121 (1.280) | 3 (0.030) | 3/256 | NT | 2.7% | coding (572/984 nt) | qorA | quinone oxidoreductase, NADPH‑dependent |
| ? | CP009273 | 4253698 = | 98 (1.080) | coding (462/984 nt) | qorA | quinone oxidoreductase, NADPH‑dependent | |||||
| * | ? | CP009273 | 4240728 = | 92 (0.970) | 3 (0.030) | 3/266 | NT | 3.2% | pseudogene (98/183 nt) | yjbI | pseudogene, SopA‑related, pentapeptide repeats‑containing |
| ? | CP009273 | 4240754 = | 88 (0.930) | pseudogene (124/183 nt) | yjbI | pseudogene, SopA‑related, pentapeptide repeats‑containing | |||||