mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1889823 = | 52 (0.510) | 4 (0.040) | 3/246 | NT | 5.7% | coding (762/1362 nt) | pabB | aminodeoxychorismate synthase, subunit I |
| ? | CP009273 | = 1889937 | 80 (0.780) | coding (876/1362 nt) | pabB | aminodeoxychorismate synthase, subunit I | |||||
| * | ? | CP009273 | = 353585 | 135 (1.310) | 5 (0.050) +G |
4/246 | NT | 3.6% | coding (817/900 nt) | cynR | transcriptional activator of cyn operon; autorepressor |
| ? | CP009273 | = 2284785 | NA (NA) | noncoding (154/199 nt) | RIP160 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site | RIP160 (repetitive extragenic palindromic) element; contains 4 REP sequences and 1 IHF site | |||||
| * | ? | CP009273 | 290568 = | 84 (0.820) | 4 (0.040) | 3/244 | NT | 4.5% | intergenic (‑58/+282) | yagM/yagN | CP4‑6 prophage; uncharacterized protein/CP4‑6 prophage; uncharacterized protein |
| ? | CP009273 | 4438070 = | 89 (0.880) | intergenic (+18/‑194) | ytfP/chpS | GGCT‑like protein/antitoxin of the ChpBS toxin‑antitoxin system | |||||