mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 76 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5960144 = | 49 (0.930) | 4 (0.080) | 3/240 | NT | 7.9% | coding (160/225 nt) | PP_5224 | hypothetical protein |
| ? | NC_002947 | 5960187 = | 47 (0.940) | coding (117/225 nt) | PP_5224 | hypothetical protein | |||||
| * | ? | NC_002947 | = 5937845 | 59 (1.120) | 4 (0.080) | 3/240 | NT | 7.2% | coding (406/2721 nt) | rbbA | ribosome‑associated ATPase |
| ? | NC_002947 | = 5937882 | 48 (0.960) | coding (443/2721 nt) | rbbA | ribosome‑associated ATPase | |||||
| * | ? | NC_002947 | 5868140 = | 42 (0.800) | 4 (0.080) | 3/240 | NT | 8.5% | coding (424/807 nt) | lgt | prolipoprotein diacylglyceryl transferase |
| ? | NC_002947 | 5868173 = | 46 (0.920) | coding (391/807 nt) | lgt | prolipoprotein diacylglyceryl transferase | |||||
| * | ? | NC_002947 | = 5726561 | 74 (1.400) | 3 (0.060) | 3/244 | NT | 4.1% | coding (405/2574 nt) | opgH | glucans biosynthesis glucosyltransferase H |
| ? | NC_002947 | = 5726599 | 69 (1.360) | coding (367/2574 nt) | opgH | glucans biosynthesis glucosyltransferase H | |||||
| * | ? | NC_002947 | 5697202 = | 66 (1.250) | 4 (0.080) | 3/242 | NT | 5.7% | coding (443/531 nt) | hslV | ATP‑dependent HslVU protease peptidase subunit |
| ? | NC_002947 | 5697233 = | 69 (1.370) | coding (474/531 nt) | hslV | ATP‑dependent HslVU protease peptidase subunit | |||||
| * | ? | NC_002947 | = 5663292 | 77 (1.460) | 3 (0.060) | 3/246 | NT | 4.1% | coding (66/1179 nt) | PP_4971 | outer membrane‑bound lytic murein transglycolase A |
| ? | NC_002947 | = 5663318 | 65 (1.270) | coding (92/1179 nt) | PP_4971 | outer membrane‑bound lytic murein transglycolase A | |||||
| * | ? | NC_002947 | 5642310 = | 63 (1.190) | 3 (0.060) | 3/244 | NT | 4.9% | coding (481/1386 nt) | dbpA | 23S rRNA specific ATP‑dependent RNA helicase |
| ? | NC_002947 | 5642348 = | 55 (1.080) | coding (519/1386 nt) | dbpA | 23S rRNA specific ATP‑dependent RNA helicase | |||||
| * | ? | NC_002947 | 5609055 = | 61 (1.150) | 3 (0.060) | 3/242 | NT | 5.0% | coding (543/1272 nt) | waaA | 3‑deoxy‑D‑manno‑octulosonic acid transferase |
| ? | NC_002947 | 5609092 = | 57 (1.130) | coding (506/1272 nt) | waaA | 3‑deoxy‑D‑manno‑octulosonic acid transferase | |||||
| * | ? | NC_002947 | 5542031 = | 75 (1.420) | 3 (0.060) | 3/244 | NT | 4.3% | coding (668/1398 nt) | dnaB | replicative DNA helicase |
| ? | NC_002947 | 5542091 = | 63 (1.240) | coding (608/1398 nt) | dnaB | replicative DNA helicase | |||||
| * | ? | NC_002947 | = 5306669 | 65 (1.230) | 3 (0.060) | 3/244 | NT | 4.4% | coding (583/3483 nt) | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit |
| ? | NC_002947 | = 5306693 | 68 (1.340) | coding (559/3483 nt) | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit | |||||