| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 1555341 | 108 (0.840) | 6 (0.050) | 4/234 | NT | 5.2% | intergenic (+37/+69) | fer/ribU | ferredoxin/hypothetical membrane protein |
| ? | CP000730 | = 1555365 | 119 (1.000) | intergenic (+61/+45) | fer/ribU | ferredoxin/hypothetical membrane protein | |||||
GTACCTGAGGAATTATATGAAGATATGGAAGATGCAATTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1555194‑1555341‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaagcaggTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAATTGCA < CP000730/1555365‑1555226 GTACCTGAGGAATTATATGAAGATATGGAAGATGCAATTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAA > 1:443141/1‑141 CTGAGGAATTATATGAAGATATGGAAGATGCAATTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGC < 2:476791/141‑1 CTGAGGAATTATATGAAGATATGGAAGATGCAATTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAAGTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGC > 1:352463/1‑141 TGAGGAATTATATGAAGATATGGAAGATGCAATTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCA > 2:1137249/1‑141 TTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCT < 1:1412979/141‑1 TTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCT < 1:963037/141‑1 CAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTT < 1:15033/130‑1 CAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTT > 2:15033/1‑130 CTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTATTTTTATTTTCTATAGAAAAAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATccagtctcaccat > 2:1578803/1‑128 GAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCA < 2:833480/141‑1 AAAAGCAGGTGACTATCAATAAACGATAACTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCAT > 1:1131420/1‑141 AAAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATC > 1:1521967/1‑141 AAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCA > 1:195306/1‑141 GCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAAT > 1:905197/1‑141 GCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAAT < 2:1458935/141‑1 GCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAAT < 2:170393/141‑1 CAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAATT < 2:651255/141‑1 GGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAATTGC > 1:1102211/1‑141 GGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAATTGC < 1:537378/141‑1 GGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAATTGC > 1:453329/1‑141 GGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAATTGC > 2:890279/1‑141 GTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAAGTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAATTGCA < 1:246908/141‑1 GTACCTGAGGAATTATATGAAGATATGGAAGATGCAATTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1555194‑1555341‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaagcaggTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAATTGCA < CP000730/1555365‑1555226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |