BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2082639 =	114 (0.880)	6 (0.050)	6/242	NT	5.3%	intergenic (+280/+345)	USA300HOU_1940/mapW2	aminotransferase/cell surface protein MapW2
*	?	CP000730	2082667 =	105 (0.850)	6 (0.050)	6/242	NT	5.3%	intergenic (+308/+317)	USA300HOU_1940/mapW2	aminotransferase/cell surface protein MapW2

Only 100 of 134 total aligned reads displayed.

TCTCTCCTAACAAAATCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTCTACATATTTTGACGAA  >  CP000730/2082499‑2082779

tctctcCTAACAAAATCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATTACACCTCTACAAATGTaaa                                                                                                                                              >  1:654932/1‑141 (MQ=255)

agtgtataaagtgtattttaaaaatggttcgtcaaaatatgtagacttaaaaactgagtataaagatgaaagagtatttaaagcaactgacattaaaaaggtagatattgaacttaaattctaatctttaattttataata                                                                                                                                              <  2:220234‑M1/1‑1 (MQ=255)

 gtgtataaagtgtattttaaaaatggttcgtcaaaatatgtagacttaaaaactgagtatcaagatgaaagagtatttcacgaaactgacatttaaaagatagatattgaaattaaactctcatctttaatcttatactaa                                                                                                                                             <  1:1650303‑M1/2‑1 (MQ=255)

 gtgtataaagtgtattttaaaaatggttcgtcaaaatatgtagacttaaaaactgagtataaagatgaaagagtatttaaagcaactgacattaaaaaggtagatattgaacttaaattctaatctttaattttataataa                                                                                                                                             <  2:317712‑M1/2‑1 (MQ=255)

 ctctcCTAACAAAATCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTaaaa                                                                                                                                             <  1:530893/141‑1 (MQ=255)

  tgtataaagtgtattttaaaaatggttcgtcaaaatatgtagacttaaaaactgagtataaagatgaaagagtatttaaagcaactgacattaaaaaggtagatattgaacttaaattctaatctttaattttataatAAg                                                                                                                                            <  1:1317450‑M1/3‑1 (MQ=255)

  tctcCTAACAAAATCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAg                                                                                                                                            >  1:247205/1‑141 (MQ=255)

    tataaagtgtattttaaaaatggttcgtcaaaatatgtagacttaaaaactgagtataaagatgaaagagtatttaaagcaactgacattaaaaaggtagatattgaacttaaattctaatctttaattttataatAAGGc                                                                                                                                          >  1:534923‑M1/137‑141 (MQ=255)

     ccTAACAAAATCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCa                                                                                                                                         >  2:63996/1‑141 (MQ=255)

      taaagtgtattttaaaaatggttagtcaacatatgtagacttaacacatgagtataaagatgaaagagtatttaaagcaactgacattaaaaaggtagatattgaacttacatcctcatctttaattttataataaggaat                                                                                                                                        <  2:827005‑M1/7‑4 (MQ=255)

        aaCAAAATCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCAccc                                                                                                                                      >  2:1236399/1‑141 (MQ=255)

         aCAAAATCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCAcccc                                                                                                                                     <  2:533573/141‑1 (MQ=255)

          cAAAATCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCa                                                                                                                                    >  2:1265430/1‑141 (MQ=255)

          cAAAATCAAAAAATCGGACAAATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCa                                                                                                                                    <  1:1032166/141‑1 (MQ=255)

           aaaaTCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCAc                                                                                                                                   >  2:164021/1‑141 (MQ=255)

             aaTCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGa                                                                                                                                 >  2:128399/1‑141 (MQ=255)

             aaTCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACAACTCTACAAATGTAAAAGGCACCCCACGa                                                                                                                                 >  1:640536/1‑141 (MQ=255)

              aTCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGAt                                                                                                                                >  2:239147/1‑141 (MQ=255)

               tCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGAtt                                                                                                                               <  1:1631944/141‑1 (MQ=255)

               tCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGAtt                                                                                                                               <  2:345564/141‑1 (MQ=255)

                cAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATtg                                                                                                                              <  2:1435047/141‑1 (MQ=255)

                 aaaaaaTCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATCGAACCAATTTATATCAATTTTGAAAACTCCCTCCACACATTCAAGAATCACATCTATACCAATGTAAAAGGCACCCCACGATtgt                                                                                                                             >  1:827005/1‑141 (MQ=25)

                  aaaaaTCGGACAGATGAAAAGTAAAAAACTTTTTCTATCATTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATtgtg                                                                                                                            >  2:1191566/1‑141 (MQ=255)

                  aaaaaTCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATtgtg                                                                                                                            >  2:302809/1‑141 (MQ=255)

                           aCAGATGAAAAGTAAAAAACTTTTTTTTTTTTTTTTATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGTCtt                                                                                                                   >  2:1321920/1‑141 (MQ=255)

                           aCAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCtt                                                                                                                   >  1:445430/1‑141 (MQ=255)

                           aCAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCtt                                                                                                                   <  2:1389412/141‑1 (MQ=255)

                           aCAGATAAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCtt                                                                                                                   <  2:784600/141‑1 (MQ=255)

                             aGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCttat                                                                                                                 >  2:160042/1‑141 (MQ=255)

                             aGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCttat                                                                                                                 >  2:160162/1‑141 (MQ=255)

                                tGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTtattat                                                                                                              <  1:200294/141‑1 (MQ=255)

                                tGAAAAGTAAAAAACTGTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCAACCCACGATTGTGTGATGCCTtattat                                                                                                              <  2:479438/141‑1 (MQ=255)

                                  aaaaGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATaa                                                                                                            >  1:894484/1‑141 (MQ=255)

                                  aaaaGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATaa                                                                                                            >  2:1548340/1‑141 (MQ=255)

                                   aaaGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATaaa                                                                                                           >  1:157820/1‑141 (MQ=255)

                                        aaaaaaCTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTaa                                                                                                      >  2:107386/1‑141 (MQ=255)

                                        aaaaaaCTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTaa                                                                                                      >  1:734163/1‑141 (MQ=255)

                                         aaaaaCTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTaaa                                                                                                     >  2:505622/1‑141 (MQ=255)

                                         aaaaaCTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACACCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTaaa                                                                                                     >  1:1434632/1‑141 (MQ=255)

                                            aaCTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGAt                                                                                                  >  1:344076/1‑141 (MQ=255)

                                             aCTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGAtt                                                                                                 <  2:688032/141‑1 (MQ=255)

                                               tttttCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAg                                                                                               <  2:1200024/141‑1 (MQ=255)

                                                 tttCTATCAGTCCGATTTCTTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGaa                                                                                             <  1:1261715/141‑1 (MQ=255)

                                                 tttCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACg                                                                                                                                  <  1:1339294/104‑1 (MQ=255)

                                                 tttCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACg                                                                                                                                  >  2:1339294/1‑104 (MQ=255)

                                                    cTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGa                                                                                              <  1:24567/137‑1 (MQ=255)

                                                    cTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGa                                                                                              >  2:24567/1‑137 (MQ=255)

                                                        cAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGt                                                                                      <  1:1181172/141‑1 (MQ=255)

                                                         aGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGtt                                                                                     <  1:1538044/141‑1 (MQ=255)

                                                              gATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAata                                                                                <  2:971629/141‑1 (MQ=255)

                                                                 ttattaTAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCt                                                                             <  1:1244646/141‑1 (MQ=255)

                                                                    ttatAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTAcc                                                                          >  1:896652/1‑141 (MQ=255)

                                                                      ataGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCtt                                                                        <  1:279108/141‑1 (MQ=255)

                                                                       taGAACCAATTTATATAACTGTTGGCAGATCTTTTCAAGCATTTAAGCATAACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGGCTTATTATAAAATTAAAGATTAGAATTTATGTTTAATATCTACCttt                                                                       >  2:264635/1‑141 (MQ=255)

                                                                          aaCCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTa                                                                    >  2:532043/1‑141 (MQ=255)

                                                                            tttaaagcaactgacattaaaaaggtagatattgaacttaaattctaatctttaattttataatAAGGCACCCCACGAt                                                                                                                                <  2:968115‑M1/15‑1 (MQ=255)

                                                                            tttaaagcaactgacattaaaaaggtagatattgaacttaaattctaatctttaattttataatAAGGCACCCCACGAt                                                                                                                                >  1:968115‑M1/65‑79 (MQ=255)

                                                                               aTTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTc                                                               >  2:184677/1‑141 (MQ=255)

                                                                                tttATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCa                                                              <  1:1240752/141‑1 (MQ=255)

                                                                                tttATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTGTAATGTCa                                                              >  1:654558/1‑141 (MQ=255)

                                                                                 ttATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTTGAATTTAAGTTCAATATCTACCTTTTTAATGTCAg                                                             <  1:1373604/141‑1 (MQ=255)

                                                                                 ttATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAg                                                             <  2:175092/141‑1 (MQ=255)

                                                                                   atataACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTCTTTAATGTCAGtt                                                           >  2:742693/1‑141 (MQ=255)

                                                                                    tataACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTg                                                          <  2:769021/141‑1 (MQ=255)

                                                                                     ataACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGc                                                         >  1:749759/1‑141 (MQ=255)

                                                                                         cTTTTCGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTa                                                     <  1:379605/141‑1 (MQ=255)

                                                                                          ttttCGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTaa                                                    <  2:603491/141‑1 (MQ=255)

                                                                                           tttGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTaaa                                                   <  2:644139/141‑1 (MQ=255)

                                                                                             tGGCAACTCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATa                                                 <  1:348091/141‑1 (MQ=255)

                                                                                              ggCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATAc                                                >  2:1157635/1‑141 (MQ=255)

                                                                                                    tCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTTAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTc                                          <  1:178219/141‑1 (MQ=255)

                                                                                                         tCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCtt                                     >  2:1432396/1‑141 (MQ=255)

                                                                                                          cAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCt                                                                         >  2:248193/1‑104 (MQ=255)

                                                                                                          cAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCt                                                                         <  1:248193/104‑1 (MQ=255)

                                                                                                              cATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATAc                                <  1:289725/141‑1 (MQ=255)

                                                                                                              cATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATAc                                <  1:860896/141‑1 (MQ=255)

                                                                                                              cATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATAc                                <  1:389488/141‑1 (MQ=255)

                                                                                                                ttCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTc                              <  2:475745/141‑1 (MQ=255)

                                                                                                                 tCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCa                             >  1:1324694/1‑141 (MQ=255)

                                                                                                                 tCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCa                             >  1:1016067/1‑141 (MQ=255)

                                                                                                                 tCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCa                             >  1:488985/1‑141 (MQ=255)

                                                                                                                 tCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTAAAATACTCTTTCATCTTTATACTct                             >  2:1147120/1‑140 (MQ=255)

                                                                                                                   aaGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGt                           <  2:1460957/141‑1 (MQ=255)

                                                                                                                    aGCATGACAACTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTGAATATCTACCTTTTTAATGTCAGTTGCTTTAGATACTCTTTCATCTTTGTACTTAGtt                          >  2:202640/1‑141 (MQ=255)

                                                                                                                      cATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGtttt                        >  2:191743/1‑141 (MQ=255)

                                                                                                                        ctaatctttaattttataatAAGGCATCTCACAATCGTGGGGTGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTAAACTTGTTACTCAGTTTTTa                      <  1:924411‑M1/121‑1 (MQ=255)

                                                                                                                           caTCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGt                   >  2:1632192/1‑141 (MQ=255)

                                                                                                                           caTCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGt                   <  1:1513455/141‑1 (MQ=255)

                                                                                                                            aTCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTc                  <  1:1471452/141‑1 (MQ=255)

                                                                                                                            aTCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTc                  <  2:1215337/141‑1 (MQ=255)

                                                                                                                              ctctACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTCTa                >  1:432136/1‑141 (MQ=255)

                                                                                                                              ctctACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTCTa                <  2:406782/141‑1 (MQ=255)

                                                                                                                               tctACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTCTAc               >  2:195004/1‑141 (MQ=255)

                                                                                                                                  aCAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTCTACata            >  1:82862/1‑141 (MQ=255)

                                                                                                                                    aaaTGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTCTACATAtt          >  1:775225/1‑141 (MQ=255)

                                                                                                                                     ttataatAAGGCATCTCACAATCGTGGGGTGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTCTACATAttt         <  1:1002069‑M1/134‑1 (MQ=255)

                                                                                                                                     aaTGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTCTACATAttt         >  2:776766/1‑141 (MQ=255)

                                                                                                                                          aaaaGGCACCCCACGATTGTGAGATGCCTTATTATAAANTTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTCTACATATTTTGACg    >  1:305589/1‑141 (MQ=255)

                                                                                                                                          aaaaGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTCTACATATTTTGACg    >  2:116435/1‑141 (MQ=255)

                                                                                                                                          aaaaGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTGCATCTTTATACTCAGTTTTTAAGTCTACATATTTTGACg    >  1:1224982/1‑141 (MQ=255)

TCTCTCCTAACAAAATCAAAAAATCGGACAGATGAAAAGTAAAAAACTTTTTCTATCAGTCCGATTTATTATAGAACCAATTTATATAACTTTTGGCAAATCACTTCAAACATTCAAGCATCACATCTCTACAAATGTAAAAGGCACCCCACGATTGTGAGATGCCTTATTATAAAATTAAAGATTAGAATTTAAGTTCAATATCTACCTTTTTAATGTCAGTTGCTTTAAATACTCTTTCATCTTTATACTCAGTTTTTAAGTCTACATATTTTGACGAA  >  CP000730/2082499‑2082779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.