BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2388283 =	146 (1.130)	4 (0.040)	4/220	NT	3.3%	intergenic (+18/+84)	USA300HOU_2247/USA300HOU_2248	MFS family major facilitator transporter/hypothetical protein
*	?	CP000730	2388362 =	106 (0.950)	4 (0.040)	4/220	NT	3.3%	intergenic (+97/+5)	USA300HOU_2247/USA300HOU_2248	MFS family major facilitator transporter/hypothetical protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 186 total aligned reads displayed.

TTATTTACTCATATGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCTTTAGTAATTTTATCTAACAATTTCT  >  CP000730/2388143‑2388422

ttATTTANTCATATGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTAAAAAAt                                                                                                                                             <  2:1239879/141‑1 (MQ=255)

ttATTTACTCATATGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAAt                                                                                                                                             >  1:1155823/1‑141 (MQ=255)

 tataaaaaagagcttatttctaaattgcgttctgaaacggatgaaagacaagtattctatttctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactt                                                                                                                                             >  1:98496‑M1/141‑141 (MQ=255)

  ataaaaaagagcttatttctaaattgcgttctgaaacggatgaaagacaagtattctatttctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactTa                                                                                                                                            <  2:1038351‑M1/2‑1 (MQ=255)

   taaaaaagagcttatttctaaattgcgttctgaaacggatgaaagacaagtattctatttctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactTaa                                                                                                                                           <  1:651386‑M1/3‑1 (MQ=255)

    ttACTCATATGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATaaaa                                                                                                                                         >  2:1186613/1‑141 (MQ=255)

    ttACTCATATGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATaaaa                                                                                                                                         >  1:1629291/1‑141 (MQ=255)

    ttACTCATATGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATaaaa                                                                                                                                         >  2:27585/1‑141 (MQ=255)

      aCTCATATGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAg                                                                                                                                       >  1:984016/1‑141 (MQ=255)

        tCATATGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTCCTTATG‑TGGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCa                                                                                                                                     <  1:449310/141‑1 (MQ=255)

        aagagcttatttctaaattgcgttctgaaacggatgaaagacaagtattctatttctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactTAAAAAGc                                                                                                                                      >  2:1431696‑M1/134‑141 (MQ=255)

         agagcttatttctaaattgcgttctgaaacggatgaaagacaagtattctatttctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactTAAAAAGCa                                                                                                                                     >  2:724470‑M1/133‑141 (MQ=255)

         agagcttatttctaaattgcgttctgaaacggatgaaagacaagtattctatttctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactTAAAAAGCa                                                                                                                                     <  1:87716‑M1/9‑1 (MQ=255)

          atatGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATg                                                                                                                                   <  2:682205/141‑1 (MQ=255)

           agcttatttctaaattgcgttctgaaacagatgaaagacaagtattctatttctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaaaaaaaaaaaAAAAAAGCATg                                                                                                                                   >  2:926151‑M1/131‑141 (MQ=255)

            gcttatttctaaattgcgttctgaaacggatgaaagacaagtattctatttctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactTAAAAAGCATGc                                                                                                                                  <  2:590293‑M1/12‑1 (MQ=255)

            atGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGcc                                                                                                                                 <  1:1295599/141‑1 (MQ=255)

            atGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGcc                                                                                                                                 <  2:336235/141‑1 (MQ=255)

               tatttctaaattgcgttctgaaacggatgaaagacaagtattctatttctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactTAAAAAGCATGCCaa                                                                                                                               >  2:556134‑M1/127‑141 (MQ=255)

               tatttctaaattgcgttctgaaacggatgaaagacaagtattctatttctatagtactactcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactTAAAAAGCATGCCaa                                                                                                                               >  2:659466‑M1/127‑141 (MQ=255)

                 tttctaaattgcgttctgaaacggatgaaagacaagtattctatttctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactTAAAAAGCATGCCAAtc                                                                                                                             >  2:163469‑M1/125‑141 (MQ=255)

                   cATATAGTGAATTCTTCGGCTTTATGGCCGCTTTCGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTTATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATctct                                                                                                                          <  2:939941/141‑1 (MQ=255)

                       taGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATtc                                                                                                                      <  1:1407236/141‑1 (MQ=255)

                       aattgcgttctgaaacggatgaaagacaagtattctatttctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaacaaaaaacttaaaaagcatagtaatgattgct                                                                                                                       <  1:938210‑M1/23‑14 (MQ=255)

                        aGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATtca                                                                                                                     <  1:367073/141‑1 (MQ=255)

                         gTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATtcat                                                                                                                    >  1:395304/1‑141 (MQ=255)

                             aaTCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCAtt                                                                                                                >  1:1023963/1‑141 (MQ=255)

                             aaTCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCAtt                                                                                                                >  1:49116/1‑141 (MQ=255)

                               tCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTtg                                                                                                              <  1:562356/141‑1 (MQ=255)

                                 ttCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTtgtc                                                                                                            >  1:564937/1‑141 (MQ=255)

                                   cGGCTTTATGGCCGCTTTCGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTtgtctg                                                                                                          >  1:1633416/1‑141 (MQ=255)

                                   cGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCAtt                                                                                                                <  1:32232/135‑1 (MQ=255)

                                   cGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCAtt                                                                                                                >  2:32232/1‑135 (MQ=255)

                                   cGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTtgtctg                                                                                                          >  2:196366/1‑141 (MQ=255)

                                     gCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTtgtctgtc                                                                                                        <  2:1622438/141‑1 (MQ=255)

                                         tATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCa                                                                                                    >  2:498485/1‑141 (MQ=255)

                                             gCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGAc                                                                                                <  1:533365/141‑1 (MQ=255)

                                              ccGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACg                                                                                               <  1:357816/141‑1 (MQ=255)

                                              ccGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACg                                                                                               <  1:896651/141‑1 (MQ=255)

                                                  gttAGCAATCATTAC‑TATGCTTGTTTACTTCTTGATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAAt                                                                                           <  1:590996/140‑1 (MQ=255)

                                                   ttAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAAtt                                                                                          <  1:1053455/141‑1 (MQ=255)

                                                    tAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTa                                                                                         <  2:1330986/141‑1 (MQ=255)

                                                     aGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCacaacaaccttat                                                                                        >  2:59569/1‑129 (MQ=255)

                                                        aaTCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTatgat                                                                                     <  1:354064/141‑1 (MQ=255)

                                                         aTCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTatgatg                                                                                    <  1:252333/141‑1 (MQ=255)

                                                         aTCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATAATCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTatgatg                                                                                    <  2:345764/141‑1 (MQ=255)

                                                             ttAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATctct                                                                                                                          <  1:1598519/99‑1 (MQ=255)

                                                             ttAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATctct                                                                                                                          >  2:1598467/1‑99 (MQ=255)

                                                              tctatagtacttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactTAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACt                                                                                >  1:619500‑M1/80‑141 (MQ=255)

                                                              tAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTg                                                                               <  2:517312/141‑1 (MQ=255)

                                                                 accaggtcgcttACTTTTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTAAATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGAt                                                                             <  2:1180786/131‑1 (MQ=255)

                                                                  tATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGAAGAAATTATGATGTACTGAtt                                                                            >  1:510509/1‑141 (MQ=255)

                                                                   aTGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTg                                                                           >  1:1138903/1‑141 (MQ=255)

                                                                   aTGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTg                                                                           <  1:1647349/141‑1 (MQ=255)

                                                                    tGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTgg                                                                          >  1:1124595/1‑141 (MQ=255)

                                                                    tGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTgg                                                                          <  2:1227861/141‑1 (MQ=255)

                                                                      cTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCa                                                                        >  2:651386/1‑141 (MQ=255)

                                                                       ttGTTTACTTATTAATTCATGGACGCCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAACAAAAAGCATGCCTATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCAt                                                                       <  2:25228/141‑1 (MQ=255)

                                                                       cttctcaaaagaaattgttagataaaattactaaagaaatagaagtgttaagcgttacaaactaaaaactTAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCAt                                                                       >  1:1374903‑M1/71‑141 (MQ=255)

                                                                        tGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATg                                                                      >  2:1292338/1‑141 (MQ=255)

                                                                           ttACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCtt                                                                   >  1:632844/1‑141 (MQ=255)

                                                                           ttACTTCTTAATTCATGGACGTCATGTAACTAGAAATGACCTGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGCTGTCCTGATTGGCATGCtt                                                                   >  2:660446/1‑141 (MQ=255)

                                                                            tACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCttt                                                                  <  1:1557378/141‑1 (MQ=255)

                                                                              cttcttAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCttttt                                                                >  1:160798/1‑141 (MQ=255)

                                                                              cttcttAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCttttt                                                                <  2:628219/141‑1 (MQ=255)

                                                                                        cATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAg                                                      <  2:395304/141‑1 (MQ=255)

                                                                                        cATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAg                                                      >  1:1598234/1‑141 (MQ=255)

                                                                                        cATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAg                                                      >  1:1505666/1‑141 (MQ=255)

                                                                                          tGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGtt                                                    >  1:146969/1‑141 (MQ=255)

                                                                                          tGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGtt                                                    >  1:582624/1‑141 (MQ=255)

                                                                                             aCGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAGAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGt                                                 >  2:1318580/1‑141 (MQ=255)

                                                                                             aCGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGt                                                 >  2:1555437/1‑141 (MQ=255)

                                                                                                tCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAAc                                              <  2:535739/141‑1 (MQ=255)

                                                                                                    gTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCtt                                          <  2:622733/141‑1 (MQ=255)

                                                                                                    gTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCtt                                          >  2:1253078/1‑141 (MQ=255)

                                                                                                    gTAAATAGAAATGCCATGAACTAAATATTTCTATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCACGACGCTATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCtt                                          <  2:1402454/141‑1 (MQ=255)

                                                                                                     tAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTa                                         >  1:1218762/1‑141 (MQ=255)

                                                                                                      aaCTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCTATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTaa                                        <  1:1254954/141‑1 (MQ=255)

                                                                                                           gAAATGCCATGAACTAAATATTTATATTCAACAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACtt                                   >  2:1629255/1‑141 (MQ=255)

                                                                                                             aaTGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCt                                 <  1:843600/141‑1 (MQ=255)

                                                                                                              aTGCCATGAACTAAATCTTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTa                                <  1:187675/141‑1 (MQ=255)

                                                                                                               tGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTAt                               >  1:769402/1‑141 (MQ=255)

                                                                                                               agaagtgttaagcgttactaactaataactTAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTAt                               >  2:865701‑M1/31‑141 (MQ=255)

                                                                                                                gCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTAtt                              >  2:1525288/1‑141 (MQ=255)

                                                                                                                  cATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGGTGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTc                            <  1:1089314/141‑1 (MQ=255)

                                                                                                                   aTGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCGAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCt                           <  2:1211276/141‑1 (MQ=255)

                                                                                                                   aTGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCt                           >  2:1027568/1‑141 (MQ=255)

                                                                                                                    tGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCtt                          >  2:1573930/1‑141 (MQ=255)

                                                                                                                    tGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCtt                          <  2:346387/141‑1 (MQ=255)

                                                                                                                           aaTATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCTTTAGTAAt                   <  1:344094/141‑1 (MQ=255)

                                                                                                                           aaTATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCTTTAGTAAt                   >  1:1552984/1‑141 (MQ=255)

                                                                                                                           aaTATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCTTTAGTAAt                   <  1:1099485/141‑1 (MQ=255)

                                                                                                                            atatTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCTTTAGTAAtt                  >  2:1415136/1‑141 (MQ=255)

                                                                                                                                ttATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCTTTAGTAATTTTAt              >  1:953464/1‑141 (MQ=255)

                                                                                                                                  atatTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCTTTAGTAATTTTATCt            <  1:286035/141‑1 (MQ=255)

                                                                                                                                  atatTCAAAAATAAAAAGCATGCCAATATCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGATTTTAGATTGTAACGCTTAACACTTCTATTTCTTTAGTAATTTTATCt            >  2:1492264/1‑141 (MQ=255)

                                                                                                                                       cAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCTTTAGTAATTTTATCTAACaa       >  2:816765/1‑141 (MQ=255)

                                                                                                                                       cAAAAATAAAAAGCATGCCAATCTACATTCATCATGTGTCTGTCGCCAATACGCAATGAGTAGGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTGGTAACGCTTAACACTTCTATTTCTTTAGTAATTTTATCTAACaa       >  1:660853/1‑141 (MQ=255)

                                                                                                                                           aaTAAAAAGCATGCCAATCTATATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTAGTACCGCTTTACACTTCTATTTCTCTAGTAATTTTATCTAACAATTTc   <  2:576948/141‑1 (MQ=255)

                                                                                                                                            aTAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCTTTAGTAATTTTATCTAACAATTTCt  <  1:669788/141‑1 (MQ=255)

TTATTTACTCATATGTTTTCATATAGTGAAATCTTCGGCTTTATGGCCGCTTTAGCAATCATTAC‑TATGCTTGTTTACTTCTTAATTCATGGACGTCATGTAACTAGAAATGCCATGAACTAAATATTTATATTCAAAAATAAAAAGCATGCCAATCTCTATTCATCATTTGTCTGTCCCCAAGACGCAATTATGATGTACTGATTGGCATGCTTTTTAAGTTTTTAGTTTGTAACGCTTAACACTTCTATTTCTTTAGTAATTTTATCTAACAATTTCT  >  CP000730/2388143‑2388422

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.