BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	955970 =	129 (1.000)	11 (0.090)	8/230	NT	9.2%	intergenic (‑192/+50)	glpQ2/argH	glycerophosphodiester phosphodiesterase/argininosuccinate lyase
*	?	CP000730	956005 =	100 (0.850)	11 (0.090)	8/230	NT	9.2%	intergenic (‑227/+15)	glpQ2/argH	glycerophosphodiester phosphodiesterase/argininosuccinate lyase

Only 100 of 145 total aligned reads displayed.

TTTTACAATTTATAACATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTAAATATCGGCA  >  CP000730/955866‑956143

ttttACAATTTATAACATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGggtagg                                                                                                                                           <  1:1425951/141‑1 (MQ=255)

ttttACAATTTATAACATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGggtagg                                                                                                                                           <  1:1426169/141‑1 (MQ=255)

ttttACAATTTATAACATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGggtagg                                                                                                                                           >  1:1447948/1‑141 (MQ=255)

    aCAATTTATAACATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGa                                                                                                                                       >  1:1141585/1‑141 (MQ=255)

      aaacgacgtcaaagttacggttcaacaggtcaatcatcggtcaaacaacaacttgatgttgctaaacaattactatcacaataaatacgttaatctacctacccacaatgtaattttaatagacattgtgggtaGGTAGAt                                                                                                                                      <  1:401596‑M2/7‑1 (MQ=255)

         ttATAACATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAAc                                                                                                                                  <  1:54823/141‑1 (MQ=255)

         ttATAACATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAAc                                                                                                                                  <  1:1055561/141‑1 (MQ=255)

          tataACATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACg                                                                                                                                 <  1:229759/141‑1 (MQ=255)

             aaCATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGtat                                                                                                                              >  1:1207643/1‑141 (MQ=255)

             aaCATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGtat                                                                                                                              <  1:1135741/141‑1 (MQ=255)

             aaCATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGtat                                                                                                                              <  1:1609793/141‑1 (MQ=255)

               cATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGtattt                                                                                                                            <  2:1537484/141‑1 (MQ=255)

               cATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGtattt                                                                                                                            >  2:539723/1‑141 (MQ=255)

               cATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGtattt                                                                                                                            >  1:997291/1‑141 (MQ=255)

                     ttttttttttttttAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATtgtg                                                                                                                      >  2:86693/12‑141 (MQ=255)

                        aaTATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGAGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTGGGTAGATTAACGTATTTCTTGTGAtc                                                                                                                   >  2:1311478/1‑140 (MQ=255)

                         atatAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAg                                                                                                                  >  1:1579336/1‑141 (MQ=255)

                         atatAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACACACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTCGAACAACGTATTTATTGTGATAg                                                                                                                  >  1:434996/1‑141 (MQ=255)

                          tataAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGt                                                                                                                 <  1:363853/141‑1 (MQ=255)

                          tataAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGt                                                                                                                 >  1:1251423/1‑141 (MQ=255)

                          aataAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGt                                                                                                                 <  2:1139150/140‑1 (MQ=255)

                           tcaacaggtcaatcatcggtcaaacaacaacttgatgttgctaaacaattactatcacaataaatacgttaatctacctacccacaatgtaattttaatagacattgtgggtaGGTAGATTAACGTATTTATTGTGATAGt                                                                                                                 <  1:1446037‑M2/28‑1 (MQ=255)

                            taAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTaa                                                                                                               <  1:995465/141‑1 (MQ=255)

                              aaTTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAAtg                                                                                                             <  1:1571490/141‑2 (MQ=255)

                                   tcaatcatcggtcaaacaacaacttgatgttgctaaacaattactatcacaataaatacgttaatctacctacccacaatgtaattttattagacattgtgggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGttt                                                                                                         <  2:1108433‑M2/36‑1 (MQ=255)

                                   aaaaGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTa                                                                                                        >  2:47299/1‑141 (MQ=255)

                                        aaTTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAAc                                                                                                   <  2:1399287/141‑1 (MQ=255)

                                         aTTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACa                                                                                                  >  2:192496/1‑141 (MQ=255)

                                         aTTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACa                                                                                                  >  1:964639/1‑141 (MQ=255)

                                          ttATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACAt                                                                                                 <  2:211808/141‑1 (MQ=255)

                                           tATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATc                                                                                                <  2:682826/141‑1 (MQ=255)

                                             tCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCaa                                                                                              >  1:198153/1‑141 (MQ=255)

                                              cAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAg                                                                                             >  2:1215846/1‑141 (MQ=255)

                                              cAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAg                                                                                             <  2:535658/141‑1 (MQ=255)

                                               aaaCATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAgt                                                                                            <  1:118630/141‑1 (MQ=255)

                                                   aTTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAgttgtt                                                                                        >  2:1496129/1‑141 (MQ=255)

                                                         ggAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGa                                                                                  <  2:1447948/141‑1 (MQ=255)

                                                          gAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGAc                                                                                 <  2:139064/141‑1 (MQ=255)

                                                            aTCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGc                                                                                                      >  2:104571/1‑118 (MQ=255)

                                                            aTCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGc                                                                                                      <  1:104571/118‑1 (MQ=255)

                                                            aTCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCg                                                                               <  2:1519150/141‑1 (MQ=255)

                                                               ttAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCgatg                                                                            <  2:612052/141‑1 (MQ=255)

                                                                tAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCgatga                                                                           >  1:331473/1‑141 (MQ=255)

                                                                tAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCgatga                                                                           <  1:417385/141‑1 (MQ=255)

                                                                tAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATGAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCgatga                                                                           <  2:756613/141‑1 (MQ=255)

                                                                 aaaaaTGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCgatgat                                                                          <  2:1072073/141‑1 (MQ=255)

                                                                 aaaaaTGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCgatgat                                                                          <  1:554455/141‑1 (MQ=255)

                                                                 aaaaaTGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCgatgat                                                                          <  2:342514/141‑1 (MQ=255)

                                                                     aTGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACACTGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGAc                                                                      <  2:691576/141‑1 (MQ=255)

                                                                        tgATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTg                                                                   >  2:1496477/1‑141 (MQ=255)

                                                                        tgATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTg                                                                   <  1:619949/141‑1 (MQ=255)

                                                                        tgATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTg                                                                   <  2:1221605/141‑1 (MQ=255)

                                                                         gATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGt                                                                  <  1:1290583/141‑1 (MQ=255)

                                                                               caacaaGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAAcc                                                            >  2:898887/1‑141 (MQ=255)

                                                                                 acaaGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGt                                                          >  2:1033290/1‑141 (MQ=255)

                                                                                  caaGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTa                                                         >  1:624747/1‑141 (MQ=255)

                                                                                     gACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACt                                                      >  1:268223/1‑141 (MQ=255)

                                                                                      taaatacgttaatctaccTACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACtt                                                     <  2:1551512‑M1/123‑1 (MQ=255)

                                                                                        gAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTg                                                   >  2:28801/1‑141 (MQ=255)

                                                                                         aaGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGa                                                  >  2:100108/1‑141 (MQ=255)

                                                                                          agagagCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGAc                                                 >  2:925090/1‑141 (MQ=255)

                                                                                           gagagCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGAcg                                                <  2:1269846/141‑1 (MQ=255)

                                                                                             gagCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGAcgtc                                              <  1:631590/141‑1 (MQ=255)

                                                                                              agCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGAcgtcg                                             >  2:201785/1‑141 (MQ=255)

                                                                                               ccagtaatatatcccacaatgtctattaaaattacattgtgggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGAcgtcg                                             <  2:1369973‑M2/96‑1 (MQ=255)

                                                                                                 atctaccTACCCACAATGTCTATTAAAATT‑ACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGttt                                          <  1:401596‑M1/134‑1 (MQ=255)

                                                                                                 aTTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGttt                                          >  2:801579/1‑141 (MQ=255)

                                                                                                      aaTACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAAc                                     <  1:1037944/141‑1 (MQ=255)

                                                                                                       aTACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACa                                    <  1:957870/141‑1 (MQ=255)

                                                                                                       aTACCCACAATGTA‑ATTTTAATAGACATTGTGGGCAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACa                                    <  1:1535713/141‑1 (MQ=255)

                                                                                                          CCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAAtt                                 <  2:1373291‑M1/141‑1 (MQ=255)

                                                                                                               AATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAg                            <  2:835814‑M1/141‑1 (MQ=255)

                                                                                                                 atgtctattaaaattacattgtgggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAgg                           >  1:606571‑M2/28‑141 (MQ=255)

                                                                                                                  GTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGttt                                                                                    <  1:1262846‑M1/82‑1 (MQ=255)

                                                                                                                  GTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGttt                                                                                    >  2:1262846‑M1/1‑82 (MQ=255)

                                                                                                                   TA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTg                        >  1:683507‑M1/1‑141 (MQ=255)

                                                                                                                   TA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTg                        >  1:217540‑M1/1‑141 (MQ=255)

                                                                                                                   TA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTg                        >  1:1033290‑M1/1‑141 (MQ=255)

                                                                                                                    a‑aTTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGc                       <  2:1002188/141‑1 (MQ=255)

                                                                                                                     ctattaaaattacattgtgggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGc                       >  2:92491‑M2/24‑141 (MQ=255)

                                                                                                                      tattaaaattacattgtgggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCa                      >  1:128372‑M2/23‑141 (MQ=255)

                                                                                                                       ttttAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGTaa                     >  1:1264896/1‑141 (MQ=255)

                                                                                                                       ttttAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTCACCTCTTCAACCGTAACTTTGACGTCGTTTTAAACACTTTTCAGGCTGCaa                     >  1:151888/1‑141 (MQ=255)

                                                                                                                        ttaaaattacattgtgggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCaaa                    >  2:375940‑M2/21‑141 (MQ=255)

                                                                                                                            aTAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTACAaataat                >  1:497689/1‑141 (MQ=255)

                                                                                                                             tAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATc               >  1:567589/1‑141 (MQ=255)

                                                                                                                              aGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCg              >  2:126125/1‑141 (MQ=255)

                                                                                                                               gACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTTTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGt             >  1:450101/1‑141 (MQ=255)

                                                                                                                               gACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGt             >  2:591857/1‑141 (MQ=255)

                                                                                                                               gACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTGTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGt             <  2:1429626/141‑1 (MQ=255)

                                                                                                                                acattgtgggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTa            <  2:1579336‑M2/129‑1 (MQ=255)

                                                                                                                                acattgtgggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTCTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTa            <  1:100108‑M2/129‑1 (MQ=255)

                                                                                                                                  attgtgggtaGGTAGATTAAAGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTaaa          <  2:361468‑M2/131‑1 (MQ=255)

                                                                                                                                   ttgtgggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTAAat         <  2:1108861‑M2/132‑1 (MQ=255)

                                                                                                                                     gtgggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTAAatat       <  2:1372843‑M2/134‑1 (MQ=255)

                                                                                                                                       gggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTAAATATCg     <  2:889219‑M2/136‑1 (MQ=255)

                                                                                                                                       gggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTAAATATCg     <  2:463464‑M2/136‑1 (MQ=255)

                                                                                                                                        ggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTAAATATCgg    <  2:1630131‑M2/137‑1 (MQ=255)

                                                                                                                                        ggtaGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTAAATATCgg    >  2:1140896‑M2/5‑141 (MQ=255)

                                                                                                                                          taGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTAAATATCGGCa  <  2:692360‑M2/139‑1 (MQ=255)

TTTTACAATTTATAACATTTTTGTAATATAAATTTAAAAGAATTATCAAACATTTTAGGAATCTTAAAAATGTGATGTTCAACAAGACGAAGAGAGCATTAAAATACCCACAATGTA‑ATTTTAATAGACATTGTGGGTAGGTAGATTAACGTATTTATTGTGATAGTAATTGTTTAGCAACATCAAGTTGTTGTTTGACCGATGATTGACCTGTTGAACCGTAACTTTGACGTCGTTTTAAACAATTTTCAGGCTGCAAATAATCGTAAATATCGGCA  >  CP000730/955866‑956143

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.