New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1555341	51 (0.930)	3 (0.060)	3/234	NT	6.1%	intergenic (+37/+69)	fer/ribU	ferredoxin/hypothetical membrane protein
	?	CP000730	= 1555365	45 (0.890)					intergenic (+61/+45)	fer/ribU	ferredoxin/hypothetical membrane protein

ATTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/1555230‑1555341 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaagcaggTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAATTGCA  <  CP000730/1555365‑1555226                                                                                                                                                                                                                                                              ATTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGGTGACTATCAATAAACGATAGCTTGCCTGC                                                                                                                 >  2:36608/1‑141    GATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTT                                                                                                              <  1:36608/141‑1       GGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTC                                                                                                           <  2:596071/141‑1                                                                                                          AAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCT                                         >  1:410320/1‑108                                                                                                          AAGCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCT                                         <  2:410320/108‑1                                                                                                            GCAGGTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAAT      <  2:197050/141‑1                                                                                                                GTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAATTGCA  >  1:411722/1‑141                                                                                                                                                                                                                                                              ATTGATGGATGCCCTACAGATTCTATTAAAATTGCAGACGAATCATTTGATGGGGACGCTTTAAAATTTGAATAATTGATTTTTTAGACAAATGTTCTATAGAAAAAGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/1555230‑1555341 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaagcaggTGACTATCAATAAACGATAGCTTGCCTGCTTTTTCTATAGAACATTTGTCTAAAAAATCAATTATTCAAATTTTAAAGCGTCCCCATCAAATGATTCGTCTGCAATTTTAATAGAATCTGTAGGGCATCCATCAATTGCA  <  CP000730/1555365‑1555226

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.