New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2150647 =	87 (1.100)	3 (0.040)	3/246	12.4	3.7%	intergenic (+131/+57)	USA300HOU_2036/frk	hypothetical protein/fructokinase
	?	CP000730	2150691 =	76 (1.050)					intergenic (+175/+13)	USA300HOU_2036/frk	hypothetical protein/fructokinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TAGCGTTTAGCAATCGCGTTGCTGCAATAGTGACAACGAAGTATGGTGCTATTAATAGTTTGCCAACATTACAAGAGGTTGAACAAGCATTTTAAATAATTCATTTATAAAACAGTGTAGGAAACAAGTTGAATCTTGTGCTACACTGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/2150798‑2150647 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctacactgttttATAAATGAATTATTTAAAATGCTTGTTCAACCTCTTGTAATGTTGGCAAACTATTAATAGCACCATACTTCGTTGTCACTATTGCAGCAACGCGATTGCTAAACGCTAAAATTTCCTCACCTTCATTTTCAAATAACT  >  CP000730/2150691‑2150828                                                                                                                                                                                                                                                                                                    TAGCGTTTAGCAATCGCGTTGCTGCAATAGTGACAACGAAGTATGGTGCTATTAATAGTTTGCCAACATTACAAGAGGTTGAACAATGATTTTAAATAATTCATTTATAAAACAGTGTAGGAAACAAGTTGAATCTTGTGC                                                                                                                                                       <  1:250405/141‑1   GCGTTTAGCAATCGCGTTGCTGCAATAGTGACAACGAAGTATGGTGCTATTAATAGTTTGCCAACATTACAAGAGGTTGAACAAGCATTTTAAATAATTCATTTATAAAACAGTGTAGGAAACAAGTTGAATCTTGTGCTA                                                                                                                                                     >  1:24596/1‑141   GCGTTTAGCAATCGCGTTGCTGCAATAGTGACAACGAAGTATGGTGCGATTAATAGTTTGCCAACATTACAAGAGGTTGAACAAGCATTTTAAATAATTCATTTATAAAACAGTGTAGGAAACAAGTTGAATCTTGTGCTA                                                                                                                                                     >  2:274630/1‑141    CGTTTAGCAATCGCGTTGCTGCAATAGTGACAACGAAGTATGGTGCTATTAATAGTTTGCCAACATTACAAGAGGTTGAACAAGCATTTTAAATAATTCATTTATAAAACAGTGTAGGAAACAAGTTGAATCTTGTGCTAC                                                                                                                                                    >  1:130976/1‑141    CGTTTAGAAATCGCGTTGCTGCAATAGTGACAACGAAGTATGGTGCTATTAATAGTTTGCCAACATTACAAGAGGTTGAACAAGCATTTTCAATAATTCATTTATAAACCAGTGTAGGAAACAAGTTGAATCTTGTGCTAC                                                                                                                                                    <  2:778119/141‑1        TAGGAATCGCGTTGCTGCAATAGTGACAACGAAGTATGGTGCTATTAATAGTTTGCCAACATTACAAGAGGTTGAACAAGCATTTTAAATAATTCAGTTATAAAACAGTGTAGGAAACAAGTTGAATCTTGTGCTACACTG                                                                                                                                                <  2:584526/141‑1        TAGCAATCGCGTTGCTGCAATAGTGACAACGAAGTATGGTGCTATTAATAGTTTGCCAACATTACAAGAGGTTGAACAAGCATTTTAAATAATTCATTTATAAAACAGTGTAGGAAACAAGTTGAATCTTGTGCTACACTG                                                                                                                                                <  1:630015/141‑1         AGCAATCGCGTTGCTGCAATAGTGACAACGAAGTATGGTGCTATTAATAGTTTGCCAACATTACAAGAGGTTGAACAAGCATTTTAAATAATTCATTTATAAAACAGTGTAGGAAACAAGTTGAATCTTGTGCTACACTGT                                                                                                                                               <  2:308516/141‑1                                                                                                   ATTCATTTATAAAACAGTGTAGGAAACAAGTTGAATCTTGTGCTACACTGTTTTATAAATGAATTATTTAAAATGCTTGTTCAACCTCT                                                                                                         <  2:199865/89‑1                                                                                                   ATTCATTTATAAAACAGTGTAGGAAACAAGTTGAATCTTGTGCTACACTGTTTTATAAATGAATTATTTAAAATGCTTGTTCAACCTCT                                                                                                         >  1:199865/1‑89                                                                                                            TAAAACAGTGTAGGAAACAAGTTGAATCTTGTGCTACACTGTTTTATAAATGAATTATTTAAAATGCTTGTTCAACCTCTTGTAATGTTGGCAAACTATTAATAGCACCATACTTCGTTGTCACTATTGCAGCAACGCGAT                                            >  1:512181/1‑141                                                                                                                                             CTACACTGTTTTATAAATGAATTATTTAAAATGCTTGTTCAACCTCTTGTAATGTTGGCAAACTATTAATAGCACCATACTTCGTTGTCACTATTGCAGCAACGCGATTGCTAAACGCTAAAATTTCCTCACCTTCATTTT           <  2:228498/141‑1                                                                                                                                                  CTGTTTTATAAATGAATTATTTAAAATGCTTGTTCAAACTCTTGTAATGTTGGCAAACTATTAATAGCACCATACTTCGTTGTCACTATTGCAGCAACGCGATTGCTAAACGCTAAAATTTCCTCACCTTCATTTNCAAAT      >  1:290796/1‑141                                                                                                                                                      TTTATAAATGAATTATTTAAAATGCTTGTTCAACCTCTTGTAATGTTGGCAAACTATTAATAGCACCATACTTCGTTGTCACTATTGCAGCAACGCGATTGCTAAACGCTAAAATTTCCTCACCTTCATTTTCAAATAACT  >  2:833077/1‑141                                                                                                                                                                                                                                                                                                    TAGCGTTTAGCAATCGCGTTGCTGCAATAGTGACAACGAAGTATGGTGCTATTAATAGTTTGCCAACATTACAAGAGGTTGAACAAGCATTTTAAATAATTCATTTATAAAACAGTGTAGGAAACAAGTTGAATCTTGTGCTACACTGTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/2150798‑2150647 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctacactgttttATAAATGAATTATTTAAAATGCTTGTTCAACCTCTTGTAATGTTGGCAAACTATTAATAGCACCATACTTCGTTGTCACTATTGCAGCAACGCGATTGCTAAACGCTAAAATTTCCTCACCTTCATTTTCAAATAACT  >  CP000730/2150691‑2150828

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.