New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	298069 =	79 (1.000)	4 (0.050)	4/250	11.8	5.2%	intergenic (+208/‑220)	tagB1/tagF	glycosyl/glycerophosphate transferase/CDP‑glycerol glycerophosphotransferase
	?	CP000730	298125 =	74 (1.010)					intergenic (+264/‑164)	tagB1/tagF	glycosyl/glycerophosphate transferase/CDP‑glycerol glycerophosphotransferase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATAGCATTTCATCATAAAATACATTTAACCATTACACTTGTCGTTAATTATCATACGAAATACATGATTAATGTACCACTTTAACATAACAAAAAATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGATAACGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/298218‑298069 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gataacgattTTTTGTTATGTTAAAGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTAATGGTTAAATGTATTTTATGATGAAATGCTATAATAGGCATGGTTACAATGAGCTTGCTCATACATATTAATATAAT  >  CP000730/298125‑298263                                                                                                                                                                                                                                                                                                   ATAGCATTTCATCATAAAATACATTTAACCATTACACTTGTCGTTAATTATCATACGAAATACATGATTAATGTACCACTTTAACATAACAAAAAATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAG                                                                                                                                                      >  2:183993/1‑141   AGCATTTCATCATAAAATACATTTAACCATTACACTTGTCGTTAATTATCATACGAAATACATGATTAATGTACCACTTTAACATAACAAAAAATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGAT                                                                                                                                                    >  1:4378/1‑141    GCATTTCATCATAAAATACATTTAACCATTACACTTGTCGTTAATTATCATACGAAATACATGATTAATGTACCACTTTAACATAACAAAAAATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGATA                                                                                                                                                   >  2:868816/1‑141     tattttatgatgAAATGCATTTAACCATTACACTTGTCGTTAATTATCATACGAAATACATGATTAATGTACCACTTTAACATAACAAAAAATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGATAA                                                                                                                                                  >  2:645556/13‑141     CATTTCATCATAAAATACATTTAACCATTACACTTGTCGTTAATTATCATACGAAATACATGATTAATGTACCACTTTAACATAACAAAAAATCGTTATCCATTCATAACGTATGTTTTTACACATTTATGAATTAGATAA                                                                                                                                                  >  2:307813/1‑141     CATTTCATCATAAAATACATTTAACCATTACACTTGTCGTTAATTATCATACGAAATACATGATTAATGTACCACTTTAACATAACAAAAAATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGATAA                                                                                                                                                  >  1:219672/1‑141      ATTTCATCATAAAATACATTTAACCATTACACTTGTCGTTAATTATCATACGAAATACATGATTAATGTACCACTTTAACATAACAAAAAATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGATAAa                                                                                                                                                 >  2:207101/1‑140          CATCATAAAATACATTTAACCATTACACTTGTCGTTAATTATCATACGAAATACATGATTAATGTACCACTTTAACATAACAAAAAATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGATAACGATT                                                                                                                                             >  1:588137/1‑141          CATCATAAAATACATTTAACCATTACACTTGTCGTTAATTATCATACGAAATACATGATTAATGTACCACTTTAACATAACAAAAAATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGATAACGATT                                                                                                                                             >  1:47096/1‑141                                                                                         ACAAAAAATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGATAACGATTTTTTGTTATGTTAAAGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTAAAGGTTAAATGTATTTT                                                              >  1:459350/1‑141                                                                                               AATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGATAACGATTTTTTGTTATGTTAACGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTAATGGTTAAATGTATTTTATGATG                                                        >  1:188634/1‑141                                                                                                  CGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGATAACGATTTTTTGTTATGTTAAAGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTACTGGTTAAATGTATTTTATGATGAAA                                                     >  2:326361/1‑141                                                                                                         CATTCATAACGTATGTGTTTACACATTTATGAA‑TGGATAACGATTTTTTGTTATGTTAAAGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTAATGGTTAAATGTATTTTATGATGAAATGCTATAA                                             >  2:329907/1‑141                                                                                                                                              ATAACGATTTTTTGTTATGTTAAAGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTAATGGTTAAATGTATTTTATGATGAAATGCTATAATAGGCATGGTTACAATGAGCTTGCTCATACATATTA         <  2:19375/141‑1                                                                                                                                              ATAACGATTTTTTGTTATGTTAAAGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTAATGGTTAAATGTATTTTATGATGAAATGCTATAATAGGCATGGTTACAATGAGCTTGCTCATACATATTA         >  1:26856/1‑141                                                                                                                                                 ACGATTTTTTGTTATGTTAAAGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTAATGGTTAAATGTATTTTATGATGAAATGCTATAATAGGCATGGTTACAATGAGCTTGCTCATACATATTAATA      <  2:599983/141‑1                                                                                                                                                 ACGATTTTTTGTTATGTTAAAGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTAATGGTTAAATGTATTTTATGATGAAATGCTATAATAGGCATGGTTACAATGAGCTTGCTCATACATATTAATA      <  2:600106/141‑1                                                                                                                                                    ATTTTTTGTTATGTTAAAGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTAATGGTTAAATGTATTTTATGATGAAATGCTATAATAGGCATGGTTACAATGAGCTTGCTCATACATATTAATATAA   <  2:206330/141‑1                                                                                                                                                     TTTTTTGTTATGTTAAAGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTAATGGTTAAATGTATTTTATGATGAAATGCTATAATAGGCATGGTTACAATGAGCTTGCTCATACATATTAATATAAT  <  1:537619/141‑1                                                                                                                                                                                                                                                                                                   ATAGCATTTCATCATAAAATACATTTAACCATTACACTTGTCGTTAATTATCATACGAAATACATGATTAATGTACCACTTTAACATAACAAAAAATCGTTATCCATTCATAACGTATGTGTTTACACATTTATGAATTAGATAACGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP000730/298218‑298069 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gataacgattTTTTGTTATGTTAAAGTGGTACATTAATCATGTATTTCGTATGATAATTAACGACAAGTGTAATGGTTAAATGTATTTTATGATGAAATGCTATAATAGGCATGGTTACAATGAGCTTGCTCATACATATTAATATAAT  >  CP000730/298125‑298263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.