| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 613840 = | 99 (1.250) | 4 (0.050) | 4/258 | 12.1 | 4.2% | coding (2152/2844 nt) | sdrC | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrC |
| ? | CP000730 | = 618855 | 87 (1.150) | coding (3957/4146 nt) | sdrD | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrD | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/613984‑613840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctgaGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTAT < CP000730/618855‑618716 TGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTAT < 1:334321/141‑1 GTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCGCTGTCTGAATCAGAGTCGCTATCTGAATCTGCGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATC < 1:596407/141‑1 CTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTG > 1:237164/1‑141 CTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTG > 2:405848/1‑141 TGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGA < 1:94751/141‑1 TGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGA < 1:800905/141‑1 TCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCCGAATCTGAGTCGCTGTCT > 1:822562/1‑141 GAGTCTGAGTCGCTGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCCGAATCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAG < 2:822562/141‑1 gtctGAATCTGTGTCGCTATCTGAATCTGAGTCGTTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAGTCGCTATCTGAGTCTGAGTC < 2:216394/137‑1 GAATCTGAGTCGCTATCTGAGTCCGAATCGCTATCTGAATCTGAGTCGCTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTG < 2:791522/141‑1 AGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTAT > 2:620426/1‑141 TGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCGCTGTCTGAATCTGAGTCGCTATCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTGTCAGAATCTGAGTCGCTATCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/613984‑613840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctgaGTCTGAGTCGCTGTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTATCTGAGTCTGAATCACTATCCGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTAT < CP000730/618855‑618716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |