| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1380211 = | 58 (0.650) | 4 (0.050) | 3/234 | NT | 7.4% | intergenic (+2308/‑867) | sbcC/acnA | exodeoxyribonuclease SbcC/aconitate hydratase |
| ? | CP000730 | 1380259 = | 48 (0.600) | intergenic (+2356/‑819) | sbcC/acnA | exodeoxyribonuclease SbcC/aconitate hydratase | |||||
AGAAATAAACCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATCCTTTTGAATATACTCAATTTTCCACAAAAACAAACAAGTAGTATATCTGTTCTAGCTACTAGAATGACATACTACTTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1380362‑1380211‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atactacttgttTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATAGGTTTATTTCTGAAAACTTAATAGAAAGGGGTTTGACAAAGCTAA > CP000730/1380259‑1380396 AGAAATATACCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATCCTTTTGAATATACTCACTTTTCCACAAAAACAAACAAGTAGTATATCTGTTCTATCTACTAGAATGACA > 1:859212/1‑141AGAAATAAACCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATCCTTTTGAATATACTCAATTTTCCACAAAAACAAACAAGTAGTATATCTGTTCTAGCTACTAGAATGACA > 2:435137/1‑141AGAAATAAACCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATCCTTTTGAATATACTCAATTTTCCACAAAAACAAACAAGTAGTATATCTGTTCTAGCTACTAGAATGACA < 2:548323/141‑1 GAAATAAACCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATCCTTTTGAATATACTCAATTTTCCACAAAAACAAACAAGTAGTATATCTGTTCTAGCTACTAGAATGACAT > 2:527131/1‑141 GAAATAAACCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATCCTTTTGAATATACTCAATTATCCACAAAAACAAACAAGTAGTATATCTGTTCTAGCTACTAGAATGACAT < 2:77258/141‑1 AAATAAACCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATCCTTTTGAATATACTCAATTTTCCACAAAAACAAACAAGTAGTATATCTGTTCTAGCTACTAGAATGACATA > 1:853148/1‑141 AATAAACCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATCCTTTTGAATATACTCAATTTTCCACAAAAACAAACAAGTAGTATATCTGTTCTAGCTACTAGAATGACATAC < 1:289333/141‑1 AACCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATCCTTTTGAATATACTCAATTTTCCACAAAAACAAACAAGTAGTATATCTGTTCTAGCTACTAGAATGACATACTACT > 1:970924/1‑141 AACCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATCCTTTTGAATATACTCAATTTTCCACAAAAACAAACAAGTAGTATATCTGTTCTAGCTACTAGAATGACATACTACT < 2:628210/141‑1 CCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATACTTTTGAATATACTCAATTTTCCACAAAAACAAACAAGTAGTATATCTGTTCTAGCTACTAGGATGACATACTACTTG > 1:901343/1‑141 AACAAGTAGTATATCTGTTCTAGCTACTAGAATGACATACTACTTGTTTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATA > 1:359290/1‑141 AACAAGTAGTATATCTGTTCTAGCTACTAGAATGACATACTACTTGTTTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATA > 1:544321/1‑141 ACAAGTAGTATATCTGTTCTAGCTACTAGAATGACATACTACTTGTTTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATAG > 1:249149/1‑141 GTATATCTGTTCTAGCTACTAGAATGACATACTACTTGTTTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATAGGTTTATT > 2:974815/1‑141 ATACTAATTGTTTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATAGGTTTATTTCTGAAAACTTAATAGAAAGGGGTTTGA < 1:234760/141‑1 TACTACTTGTTTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATAGGTTTATTTCTGAAAACTTAATAGAAAGGGGTTTGAC < 2:518059/141‑1 TACTACTTGTTTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATAGGTTTATTTCTGAAAACTTAATAGAAAGGGGTTTGAC < 2:77214/141‑1 ACTACTTGTTTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATAGGTTTATTTCTGAAAACTTAATAGAAAGGGGTTTGACA > 1:169735/1‑141 TGTTTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATAGGTTTATTTCTGAAAACTTAATAGAAAGGGGTTTGACAAAGCTA > 1:653125/1‑141 GTTTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATAGGTTTATTTCTGAAAACTTAATAGAAAGGGGTTTGACAAAGCTAA < 1:11568/141‑1 AGAAATAAACCTATCTTAAAATATAAAAAAATCGAGAATTCGTAGTTTAATAACGAAATTCTCGTTCTTATCCTTTTGAATATACTCAATTTTCCACAAAAACAAACAAGTAGTATATCTGTTCTAGCTACTAGAATGACATACTACTTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1380362‑1380211‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atactacttgttTGTTTTTGTGGAAAATTGAGTATATTCAAAAGGATAAGAACGAGAATTTCGTTATTAAACTACGAATTCTCGATTTTTTTATATTTTAAGATAGGTTTATTTCTGAAAACTTAATAGAAAGGGGTTTGACAAAGCTAA > CP000730/1380259‑1380396 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |