| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | = 1380222 | 55 (0.620) | 4 (0.050) | 4/234 | NT | 7.6% | intergenic (+2319/‑856) | sbcC/acnA | exodeoxyribonuclease SbcC/aconitate hydratase |
| ? | CP000730 | = 1380246 | 48 (0.600) | intergenic (+2343/‑832) | sbcC/acnA | exodeoxyribonuclease SbcC/aconitate hydratase | |||||
TGACTCCGAATAAACATCGCTTACAAGAATATATCAAGAGTCAACAAGAAGATTATGAATCTGACATTCTTGAAAAGCGTCAGTCACGTAGAAATATAGAGAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATAACAAGTAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1380071‑1380222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaagtagtatATCTGTTCTAGCTACTAGAA‑TGACATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATATTTCTACGTGACTGACGCTTTTCAAGAATGTCAGATTCATAATCTTCTTGTTG < CP000730/1380246‑1380112 tcACTCCGAATAAACATCGCTTACAAGAATATATCAATAATCAACAAGAAGATTATGAATCTGACATTCTTGAAAAGCTTCAGTCACGTAGAAATATAGAGAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATA < 2:341532/139‑1TGACTCCGAATAAACATCGCTTACAAGAATATATCAAGAGTCAACAAGAAGATTATGAATCTGACATTCTTGAAAAGCGTCAGTCACGTAGAAATATAGAGAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATA > 2:853148/1‑141 ACTCCGAATAAACATCGCTTACAAGAATATATCAAGAGTCAACAAGAAGATTATGAATCTGACATTCTTGAAAAGCGTCATTCACGTAGAAAAAAAAAAAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATAAC < 2:985095/141‑1 ACTCCGAATAAACATCGCTTAAAAGAATATATCAAGAGTCAACAAGAAGATTATGAATCTGACATTCTTGAAAAGCGTCAGTCACGTAGAAAAAAAAAAAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATAAC < 2:87485/141‑1 CTCCGAATAAACATGGCATACATGAATATATCAAGAGTCAACAAGAAGATTATGAATCTGACATTCTTGAAAAGCGTCAGTCACGTAGAAAGATAAAGAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATAACA < 2:1081365/141‑1 CGAATAAACATCGCTTACAAGAATATATCAAGAGTCAACAAGAAGATTATGAATCTGACATTCTTGAAAAGCGTCAGTCACGTAGAAATATAGAGAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATAACAAGT < 1:440606/141‑1 CGAATAAACATCGCTTACAAGAATATATCAAGAGTCAACAAGAAGATCATGAATCTGACATTCTTGAAAAGCGTCAGTCACGTAGAAATATAGAGAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATAACAAGT > 1:603348/1‑141 TATATCAAGAGTCAACAAGAAGATTATGAATCTGACATTCTTGAAAAGCGTCAGTCACGTAGAAAAATAAAAAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATAACAAGTAGTATATCTGTTCTAGCTACTAG < 2:953074/141‑1 aATTATGAATCTGACAATCTTGAAAAGCGTCAGTCACGTAGAAATATAGAAAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATAACAAGTAGTATATCTGTTCTAGCTACTAGAA‑TGACATACTACTTGTTATT < 2:834657/140‑1 TATAGAGAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATAACAAGTAGTATGTC‑ATTCTAGTAGCTAGAACAGATATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATA > 1:297262/1‑140 TATAGAGAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATAACAAGTAGTATGTC‑ATTCTAGTAGCTAGAACAGATATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATA < 2:297262/140‑1 ACAAGTAGTATATCTGTTCTAGCTACTAGAA‑TGACATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATATTTCTACGTGACTGACGCTTTTCAAGAATGTCAGATTCATAATCTTCT > 1:999658/1‑141 CAAGTAGTATATCTGTTCTAGCTACTAGAA‑TGACATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATATTTCTACGTGACTGACGCTTTTCAAGAATGTCAGATTCATAATCTTCTT > 1:319709/1‑141 AAGTAGTATATCTGTTCTAGCTACTAGAA‑TGACATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATATTTCTACGTGACTGACGCTTTTCAAGAATGTCAGATTCATAATCTTCTTG < 2:1072042/141‑1 AAGTAGTATATCTGTTCTAGCTACTAGAA‑TGACATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATATTTCTACGTGACTGACGCTTTTCAAGAATGTCAGATTCATAATCTTCTTG < 2:939987/141‑1 GTAGTATATCTGTTCTAGCTACTAGAA‑TGACATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATATTTCTACGTGACTGACGCTTTTCAAGAATGTCAGATTCATAATCTTCTTGTT < 1:572430/141‑1 GTAGTATATCTGTTCTAGCTACTAGAA‑TGACATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATATTTCTACGTGACTGACGCTTTTCAAGAATGTCAGATTCATAATCTTCTTGTT < 1:355551/141‑1 TAGTATATCTGTTCTAGCTACTAGAA‑TGACATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATATTTCTACGTGACTGACGCTTTTCAAGAATGTCAGATTCATAATCTTCTTGTTG < 1:827655/141‑1 TAGTATATCTGTTCTAGCTACTAGAA‑TGACATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATATTTCTACGTGACTGACGCTTTTCAAGAATGTCAGATTCATAATCTTCTTGTTG < 1:1009741/141‑1 TGACTCCGAATAAACATCGCTTACAAGAATATATCAAGAGTCAACAAGAAGATTATGAATCTGACATTCTTGAAAAGCGTCAGTCACGTAGAAATATAGAGAAAAAAGATAACTAATAAAGTTTAGTTAAGTATTTTAATAACAAGTAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000730/1380071‑1380222‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacaagtagtatATCTGTTCTAGCTACTAGAA‑TGACATACTACTTGTTATTAAAATACTTAACTAAACTTTATTAGTTATCTTTTTTCTCTATATTTCTACGTGACTGACGCTTTTCAAGAATGTCAGATTCATAATCTTCTTGTTG < CP000730/1380246‑1380112 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |