| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 2636356 = | 70 (0.790) | 3 (0.040) | 3/236 | NT | 4.3% | intergenic (‑409/+60) | fnbA/gntP | fibronectin‑binding protein A/GntP family gluconate:proton (H+) symporter |
| ? | CP000730 | 2636404 = | 69 (0.850) | intergenic (‑457/+12) | fnbA/gntP | fibronectin‑binding protein A/GntP family gluconate:proton (H+) symporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AAAGAAACATTCTTAACATGGTCATTATTAGAAACGATTATTTCCGTTTCAGGTATCATCTTCATTTTATTCATTAGCTTATTTGTTTAACTAAATATTAAGTAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2636505‑2636356‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacacgtttaCTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTTACAGTTAAACCAAAATATTCTTTAAACATCCAAAAT > CP000730/2636404‑2636542 AAAGAAACATTCTTAACATGGTCAGTATTAGAAACGATTATTTCCGTTTCAGGTATCATCTTCATTTTATTCATTAGCTTATTTGTTTAACTAAATATTAAGTAAACGTGTTTTTAGGTAAGTGCAATATATTGCCTTGAA < 1:47929/141‑1 AGAAACATTCTTAACATGGTCATTATTAGAAACGATTATTTCCGTTTCAGGTATCATCTTCATTTTATTCATTAGCTTATTTGTTTAACTAAATATTAAGTAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAAC < 2:792616/141‑1 GAAACATTCTTAACATGGTCATTATTAGAAACGATTATTTCCGTTTCAGGTATCATCTTCATTTTATTCATTAGCTTATTTGTTTAACTAAATATTAAGTAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACA > 2:661185/1‑141 GAAACATTCTTAACATGGTCATTATTAGAAACGATTATTTCCGTTTCAGGTATCATCTTCATTTTATTCATTAGCTTATTTGTTTAACTAAATATTAAGTAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACA > 2:660977/1‑141 AAACATTCTTAACATGGTCATTATTAGAAACGATTATTTCCGTTTCAGGTATCATCTTCATTTTATTCATTAGCTTATTTGTTTAACTAAATATTAAGTAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACAC > 2:582600/1‑141 AACATTCTTAACATGGTCATTATTAGAAACGATTATTTCCGTTTCAGGTATCATCTTCATTTTATTCATTAGCTTATTTGTTTAACTAAATATTAAGTAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACACG > 1:806090/1‑141 AAGTAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTCTCTAATAATGACCATGTTAA > 1:582230/1‑141 AGTAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAG > 2:137414/1‑141 TTTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTT > 1:543607/1‑141 AACACGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTTACAGTTAAACCAAAATATTCTTTAAACA > 2:406202/1‑141 CGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTTACAGTTAAACCAAAATATTCTTTAAACATCCA > 2:498441/1‑141 CGTTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTTACAGTTAAACCAAAATATTCTTTAAACATCCA > 1:673866/1‑141 TTTACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAAGGTTTCTTTTACAGTTAAACCAAAATATTCTTTAAACATCCAAA > 1:853528/1‑141 TACTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTTACAGTTAAACCAAAATATTCTTTAAACATCCAAAAT > 1:400145/1‑141 AAAGAAACATTCTTAACATGGTCATTATTAGAAACGATTATTTCCGTTTCAGGTATCATCTTCATTTTATTCATTAGCTTATTTGTTTAACTAAATATTAAGTAAACGTGTTTTTAGGTAATTGCAATATATTGCCTTGAAACACGTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2636505‑2636356‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaacacgtttaCTTAATATTTAGTTAAACAAATAAGCTAATGAATAAAATGAAGATGATACCTGAAACGGAAATAATCGTTTCTAATAATGACCATGTTAAGAATGTTTCTTTTACAGTTAAACCAAAATATTCTTTAAACATCCAAAAT > CP000730/2636404‑2636542 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |