BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1205323	76 (0.860)	35 (0.560) +AGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAG	7/182	NT	38.0%	intergenic (+459/‑365)	yfiE/lspA	possible lactoylglutathione lyase/A8 family signal peptidase II
*	?	CP000730	2478252 =	86 (0.970)	35 (0.560) +AGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAG	7/182	NT	38.0%	intergenic (+139/+932)	USA300HOU_2340/htrB	hypothetical membrane protein/hemin ABC superfamily ATP binding cassette transporter, ABC protein

Only 100 of 124 total aligned reads displayed.

TTAAGTGTAGACGATTCATGTCTTATTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACT  >  CP000730/1205187‑1205463

ttAAGTGTAGACGATTCATGTCTTATTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGa                                                                                                                                          <  2:767668/141‑1 (MQ=255)

  aaGTGTAGACGATTCATGTCTTATTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGAcc                                                                                                                                        <  1:796588/141‑1 (MQ=255)

   aGTGTAGACGATTCATATTTTTTTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGAccc                                                                                                                                       <  1:555162/141‑1 (MQ=255)

       tAGACGATTCATGTCTTATTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCcatca                                                                                                                                   >  1:404221/1‑141 (MQ=255)

         gACGATTCATGTCTTATTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCatcatc                                                                                                                                 >  1:1050670/1‑141 (MQ=255)

          aCGATTCATGTCTTATTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCATCCTAGGAAGGGACCCAtcatca                                                                                                                                <  1:254349/141‑1 (MQ=255)

            gATTCATGTCTTATTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCaaa                                                                                                                              >  1:173624/1‑141 (MQ=255)

             aTTCATGTCTTATTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCaaaa                                                                                                                             <  1:717039/141‑1 (MQ=255)

                     cTTATTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTAta                                                                                                                     <  1:1036765/141‑2 (MQ=255)

                        aTTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTtat                                                                                                                  <  1:481806/141‑1 (MQ=255)

                             ttttatttttttaaaagtaaaATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaa                                                                                                             >  2:775577‑M1/10‑108 (MQ=255)

                               ttttttttttaaaagtaAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaata                                                                                                           >  2:97888‑M1/8‑106 (MQ=255)

                               tAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAAttt                                                                                                           <  1:220599/141‑1 (MQ=255)

                                aaaGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatag                                                                                                          <  1:1016028‑M1/141‑37 (MQ=255)

                                aaaGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAAtttt                                                                                                          >  1:1074982/1‑141 (MQ=255)

                                 tttttttttAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGTTGAGTCGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTa                                                                                                         >  2:878963/6‑141 (MQ=255)

                                 aaGTATTTGAAAGGAAAAGTACATGTTAATACGTAGTATTAGTGGCGATTCTCCTGAGGCAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACTTTAGGAAagcgaagccattcaatacgaagaatggtataaataga                                                                                                         >  2:407105‑M1/1‑104 (MQ=255)

                                 aaGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTa                                                                                                         <  2:311480/141‑1 (MQ=255)

                                 aaGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTa                                                                                                         <  2:463269/141‑1 (MQ=255)

                                  aGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTAc                                                                                                        >  2:195378/1‑141 (MQ=255)

                                        tAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAAt                                                                                                  >  1:109998/1‑141 (MQ=255)

                                         aaaaGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAAtg                                                                                                 <  2:397423/141‑1 (MQ=255)

                                          aaaGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTTAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAAtgt                                                                                                >  2:435626/1‑141 (MQ=255)

                                          aaaGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAAtgt                                                                                                <  1:358583/141‑1 (MQ=255)

                                           aaGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAAtgtg                                                                                               >  1:474176/1‑141 (MQ=255)

                                            aGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagta                                                                                              <  2:312178‑M1/141‑49 (MQ=255)

                                            aGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagta                                                                                              >  1:893813‑M1/1‑93 (MQ=255)

                                            aGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagta                                                                                              <  2:627695‑M1/141‑49 (MQ=255)

                                            aGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGc                                                                                              >  2:849431/1‑141 (MQ=255)

                                             gTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaa                                                                                             <  1:907819‑M1/141‑50 (MQ=255)

                                             gTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaa                                                                                             <  2:432538‑M1/141‑50 (MQ=255)

                                             gTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaa                                                                                             >  2:898650‑M1/1‑92 (MQ=255)

                                             gTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaa                                                                                             >  1:206304‑M1/1‑92 (MQ=255)

                                             gTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaa                                                                                             <  2:1078925‑M1/141‑50 (MQ=255)

                                              gaaaatTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaag                                                                                            <  1:817723‑M1/140‑51 (MQ=255)

                                               aaaaTTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaaga                                                                                           >  1:347132‑M1/1‑90 (MQ=255)

                                               aaaaTTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaaga                                                                                           >  1:115970‑M1/1‑90 (MQ=255)

                                               aaaaTTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAACTTCTATTTATAGAATTTTACAGTAATGTGCCAg                                                                                           <  1:561197/141‑1 (MQ=255)

                                                aaaTTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagat                                                                                          <  1:532987‑M1/141‑53 (MQ=255)

                                                aaaTTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagat                                                                                          >  2:972114‑M1/1‑89 (MQ=255)

                                                aaaTTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagat                                                                                          >  1:427149‑M1/1‑89 (MQ=255)

                                                 aaTTACATGTTAATCCGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAAACCGAGGCTGAGACGGCACCCTGGGAAGGGACCCATCATCAAAAATTCTATTCATAGAATTTTACAGTAATGTGCCAGAt                                                                                         >  2:543216/1‑141 (MQ=255)

                                                 aaTTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagata                                                                                         >  1:69748‑M1/1‑88 (MQ=255)

                                                 aaTTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagata                                                                                         >  2:952122‑M1/1‑88 (MQ=255)

                                                 aaTTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagata                                                                                         >  1:825850‑M1/1‑88 (MQ=255)

                                                 aaTTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagata                                                                                         >  1:357819‑M1/1‑88 (MQ=255)

                                                       aTGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCAt                                                                                   >  2:477892/1‑141 (MQ=255)

                                                         ggtaaTACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACACTAGGAAagcgaagccattcaatacgaagtattgtataaatagagagcagcagtaagataattttcaa                                                                                 <  2:680228‑M1/139‑62 (MQ=255)

                                                           tAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCg                                                                               <  2:1045694/141‑1 (MQ=255)

                                                               aCGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGc                                                                           <  1:768688/141‑1 (MQ=255)

                                                                cGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagataattttcaattagaaa                                                                          <  1:736505‑M1/141‑69 (MQ=255)

                                                                cGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGcc                                                                          >  2:202856/1‑141 (MQ=255)

                                                                 ttagtatTAAGGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagataattttcaattagaaaa                                                                         <  2:602612‑M1/140‑70 (MQ=255)

                                                                 ggagtattAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagataattttcaattagaaaa                                                                         <  2:602662‑M1/139‑70 (MQ=255)

                                                                  tagtaTTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagataattttcaattagaaaat                                                                        <  2:980299‑M1/141‑71 (MQ=255)

                                                                  tagtaTTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCAt                                                                        >  1:508900/1‑141 (MQ=255)

                                                                  tagtaTTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCAt                                                                        >  1:405579/1‑141 (MQ=255)

                                                                  tagtaTTAATGGCGAGACTCCGAAGTATGCAGTGCCAGTCGAAGACCGAGGTTGAGACTGCATCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagataattttcagttagaaaat                                                                        <  2:702102‑M1/141‑71 (MQ=255)

                                                                     taTTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCAAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagataattttcaattagaaaatatc                                                                     <  1:827923‑M1/141‑74 (MQ=255)

                                                                      aTTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagataattttcaattagaaaatatct                                                                    <  1:740311‑M1/141‑75 (MQ=255)

                                                                      aTTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCAAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagatgattttcaattagaaaatatct                                                                    <  2:290714‑M1/141‑75 (MQ=255)

                                                                        tAATGGCGAGACTCCTGAGTGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATa                                                                  <  1:1043172/141‑1 (MQ=255)

                                                                         aaTGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATAc                                                                 <  2:1012875/141‑1 (MQ=255)

                                                                                  aCTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATACAATActtcgtattg                                                        <  1:46865/141‑10 (MQ=255)

                                                                                    tCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGta                                                      >  2:1086165/1‑141 (MQ=255)

                                                                                    tCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGta                                                      >  2:1086382/1‑141 (MQ=255)

                                                                                        gAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaa                                                                                                      >  2:225330‑M1/1‑49 (MQ=255)

                                                                                        gAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaa                                                                                                      <  1:225330‑M1/89‑41 (MQ=255)

                                                                                        gAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATaaa                                                  >  1:894207/1‑141 (MQ=255)

                                                                                         aGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAAt                                                 <  1:195378/141‑1 (MQ=255)

                                                                                           ggAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATag                                               <  1:185962/141‑1 (MQ=255)

                                                                                           ggAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATag                                               <  1:619607/141‑1 (MQ=255)

                                                                                           ggAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATag                                               <  1:1016699/141‑1 (MQ=255)

                                                                                               cAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGaa                                           >  2:784758/1‑141 (MQ=255)

                                                                                               cAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGaa                                           >  2:614048/1‑141 (MQ=255)

                                                                                                 gTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAAca                                         >  1:75547/1‑141 (MQ=255)

                                                                                                     cAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAAcagcag                                     <  2:1070352/141‑1 (MQ=255)

                                                                                                     cAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAAcagcag                                     <  1:1079370/141‑1 (MQ=255)

                                                                                                       gTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTa                                   >  1:762882/1‑141 (MQ=255)

                                                                                                         cGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAg                                 <  1:37709/141‑1 (MQ=40)

                                                                                                           aaGACCGAGGCTGAGACTGCACCCTAGGAATAAACCAATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGAt                               <  2:1008969/141‑1 (MQ=14)

                                                                                                               ccGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAAtt                           >  2:243380/1‑141 (MQ=38)

                                                                                                                 gAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAGATAGAGAACAGCAGTAAGATAAtttt                         >  2:205221/1‑141 (MQ=38)

                                                                                                                 gAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAAtttt                         <  2:367257/141‑1 (MQ=38)

                                                                                                                  aGGCTGAGACGGCACCCTAGGAAagcgaagccattcaatacgaagtattgtataaatagagaacagcagtaagataattttcaattagaaaatatcttactgctgttctctatttatacaatacttcgtattgaatggctt                        <  1:690245‑M1/141‑119 (MQ=255)

                                                                                                                  aGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAAttttt                        <  1:583903/141‑1 (MQ=38)

                                                                                                                         gaCGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGa                 >  2:299493/1‑141 (MQ=40)

                                                                                                                          aCGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGaa                <  2:1058908/141‑1 (MQ=40)

                                                                                                                           cGGCACCCTAGGAAGGGACCCGTCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTCAATTAGaaa               <  2:49875/141‑1 (MQ=255)

                                                                                                                             gCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAat             >  1:982722/1‑141 (MQ=255)

                                                                                                                              cACCCTAGGAAGGGACCCATCATCAAAAATTCTATGTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAata            >  2:841292/1‑141 (MQ=255)

                                                                                                                               aCCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAatat           >  1:154244/1‑141 (MQ=255)

                                                                                                                                cccTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATc          >  2:657511/1‑141 (MQ=255)

                                                                                                                                cccTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATc          >  2:151448/1‑141 (MQ=255)

                                                                                                                                 ccTAGGAAGGGACCCGTCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGACGGGCAAAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTCAATTAGAAAATATCt         <  2:1057764/141‑1 (MQ=11)

                                                                                                                                  cTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCtt        >  1:953032/1‑141 (MQ=255)

                                                                                                                                   tAGGAAGTGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTta       <  2:1050670/141‑1 (MQ=255)

                                                                                                                                     ggAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTtact     >  1:313264/1‑141 (MQ=255)

                                                                                                                                       aaGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTtactac   >  2:975624/1‑141 (MQ=255)

                                                                                                                                        aGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTactact  >  2:385645/1‑141 (MQ=255)

TTAAGTGTAGACGATTCATGTCTTATTTTTTTAAAGTATTTAAAAGTAAAATTACATGTTAATACGTAGTATTAATGGCGAGACTCCTGAGGGAGCAGTGCCAGTCGAAGACCGAGGCTGAGACGGCACCCTAGGAAGGGACCCATCATCAAAAATTCTATTTATAGAATTTTACAGTAATGTGCCAGATGGGCATAGCGAAGCCATTCAATACGAAGTATTGTATAAATAGAGAACAGCAGTAAGATAATTTTTAATTAGAAAATATCTTACTACT  >  CP000730/1205187‑1205463

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.