BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	2008942 =	88 (0.990)	4 (0.050)	4/230	NT	5.4%	intergenic (+70/+121)	ygaE/ygaD	hypothetical membrane protein/ABC superfamily ATP binding cassette transporter, membrane protein
*	?	CP000730	2008991 =	63 (0.800)	4 (0.050)	4/230	NT	5.4%	intergenic (+119/+72)	ygaE/ygaD	hypothetical membrane protein/ABC superfamily ATP binding cassette transporter, membrane protein

Only 100 of 102 total aligned reads displayed.

GAATTAGCTTTTTCACATATCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATACTTTATAAGTTTTGAATGCTAT  >  CP000730/2008802‑2009082

gAATTAGCTTTTTCACATATCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTaa                                                                                                                                              >  1:368200/1‑141 (MQ=255)

   ttAGCTTTTTCACATATCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTaaaaa                                                                                                                                           <  1:739942/141‑1 (MQ=255)

   cgcatcgtgaattgattgcaaaacaaggtgcttacgagcatttatatagcattcaaaacttataaagtattagttgtttgacttcagtacaatcttgaagagaaaatttgtaacaggatggtggggtcataacatagaaaa                                                                                                                                           <  1:804993‑M1/4‑1 (MQ=255)

    tAGCTTTTTTTTATTTTATAGATCTGATGAAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGATATAAACTAATATTGAATCTCGAAATTAAATTTaaaaaa                                                                                                                                          >  2:604020/1‑141 (MQ=255)

     aGCTTTTTCACATATCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAg                                                                                                                                         >  2:394448/1‑141 (MQ=255)

     aGCTTTTTCACATATCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAg                                                                                                                                         >  1:121885/1‑141 (MQ=255)

     aGCTTTTTCACATATCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACACTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTaaaaaaa                                                                                                                                         >  1:121890/1‑140 (MQ=255)

      gCTTTTTCACATATCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGc                                                                                                                                        <  2:92551/141‑1 (MQ=255)

          tgaattgattgcaaaacaaggtgcttacgagcatttatatagcattcaaaacttataaagtattagttgtttgacttcagtacaatcttgaagagaaaatttgtaacaggatggtggggtcataacatagAAAAAGCAGTa                                                                                                                                    >  1:407139‑M1/131‑141 (MQ=255)

          tgaattgattgcaaaacaaggtgcttacgagcatttatatagcattcaaaacttataaagtattagttgtttgacttcagtacaatcttgaagagaaaatttgtaacaggatggtggggtcataacatagAAAAAGCAGTa                                                                                                                                    <  1:820476‑M1/11‑1 (MQ=255)

           ttCACATATCATAGATCTGATGAAGAAAATGAAATTGTTGAAGAAGATTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAAAAAAAAAAAAAAAAGCAGTaa                                                                                                                                   <  2:7329/141‑1 (MQ=255)

             cacaTATCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGa                                                                                                                                 <  1:602323/141‑1 (MQ=255)

             attgattgcaaaacaaggtgcttacgagcatttatatagcattcaaaacttataaagtattagttgtttgacttcagtacaatcttgaagagaaaatttgtaacaggatggtggggtcataacatagAAAAAGCAGTAAGa                                                                                                                                 >  1:696038‑M1/128‑141 (MQ=255)

               caTATCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGatt                                                                                                                               >  2:32905/1‑141 (MQ=255)

               caTATCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCCCGAAATTAAATTTAAAAAAACAGTAAGatt                                                                                                                               >  2:578737/1‑141 (MQ=255)

                  atCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGattatt                                                                                                                            >  1:738334/1‑141 (MQ=255)

                  atCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGattatt                                                                                                                            <  2:437261/141‑1 (MQ=255)

                  atCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGattatt                                                                                                                            <  2:1016774/141‑1 (MQ=255)

                   tCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTAttt                                                                                                                           >  1:1042653/1‑141 (MQ=255)

                        gATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAAt                                                                                                                      >  2:498654/1‑141 (MQ=255)

                         aTCTGATGCAAACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAAtt                                                                                                                     >  2:625345/1‑141 (MQ=255)

                          tCTGATGCAGACATTGAAATTGTTGAAGAAGACTGTGATTTATAACATTAAAACAATTGTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATATAAAAAAGCAGTAAGAGTAtttgatatta                                                                                                                    >  2:944904/1‑134 (MQ=255)

                          acTGATGCAGACATTGAAATTGTTGAAGAAAACTTTGAATTATAACATTAAAACAATTTTATCAATTAATGCAACAATAAGATAAACTAATTTTGAATCTCAAAAAAAAAAAAAAAAAAGCAGTAAGATTATTTTCAATTa                                                                                                                    <  2:737515/140‑1 (MQ=255)

                           cTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTaa                                                                                                                   >  2:103618/1‑141 (MQ=255)

                           cTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTaa                                                                                                                   <  1:937065/141‑1 (MQ=255)

                            tGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAg                                                                                                                  <  1:430159/141‑1 (MQ=255)

                            tGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAg                                                                                                                  >  1:665487/1‑141 (MQ=255)

                            tGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAg                                                                                                                  <  1:735080/141‑1 (MQ=255)

                            tGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAg                                                                                                                  >  1:75359/1‑141 (MQ=255)

                             gATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGa                                                                                                                 >  1:197444/1‑141 (MQ=255)

                                 cttacgagcatttatatagcattcaaaacttataaagtattagttgtttgacttcagtacaatcttgaagagaaaatttgtaacaggatggtggggtcataacatagAAAAAGCAGTAAGATTATTTTCAATTAAGAAAAt                                                                                                             >  1:747337‑M1/108‑141 (MQ=255)

                                 cAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAAt                                                                                                             <  2:890252/141‑1 (MQ=255)

                                    aCATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAAtctc                                                                                                          >  1:767994/1‑141 (MQ=255)

                                     cgagcatttatatagcattcaaaacttataaagtattagttgtttgacttcagtacaatcttgaagagaaaatttgtaacaggatggtggggtcataacatagAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATctct                                                                                                         >  2:638705‑M1/104‑141 (MQ=255)

                                     cATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATctct                                                                                                         >  1:20512/1‑141 (MQ=255)

                                       ttGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTa                                                                                                       <  2:123471/141‑1 (MQ=255)

                                       ttGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTa                                                                                                       >  2:754680/1‑141 (MQ=255)

                                        tGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTAc                                                                                                      >  2:873882/1‑141 (MQ=255)

                                          aaaTTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTg                                                                                                    <  2:451240/141‑1 (MQ=255)

                                          aaaTTGTTGAAGAAGACTTTGATTAATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCTGTAAGATTATTTTCAATTAAGAAAATCTCTTACTg                                                                                                    <  2:666074/141‑1 (MQ=255)

                                           aaTTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGc                                                                                                   >  1:103970/1‑141 (MQ=255)

                                            aTTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCt                                                                                                  <  1:23187/141‑1 (MQ=255)

                                              tgttgAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCttt                                                                                                <  1:1037295/141‑1 (MQ=255)

                                                ttgAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCttttt                                                                                              >  1:198253/1‑141 (MQ=255)

                                                ttgAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCttttt                                                                                              >  1:197736/1‑141 (MQ=255)

                                                  gaagaaGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCt                                                                                            >  1:207782/1‑141 (MQ=255)

                                                     gaagaCTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATg                                                                                         >  2:163311/1‑141 (MQ=255)

                                                     gaagaCTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATg                                                                                         <  1:979640/141‑1 (MQ=255)

                                                        gaCTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCCCGAAATTCAATCTACAACAGAAGTAAGATTATATTCCATTAAGAAACACTCCTACAGCTCATTCTCTGTTa                                                                                      >  1:47987/1‑141 (MQ=255)

                                                           tttGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGa                                                                                   <  2:423725/141‑1 (MQ=255)

                                                             tGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGAcc                                                                                 >  2:820476/1‑141 (MQ=255)

                                                               aTTTATAACATTAAAACAATTTTAAAAATCAAGGAAACAAAGAGATAAAAGAATATAAAAAATAGAAAGAAAATATAAAAAAGCAATAAAAATATTTTAAATAAAGAAAAGCTCATACTGCTATAACTATTTTATGAcctc                                                                               >  2:422803/1‑139 (MQ=255)

                                                                    taACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCAt                                                                          >  2:590683/1‑141 (MQ=255)

                                                                        ttagttgtttgacttcagtacaatcttgaagagaaaatttgtaacaggatggtggggtcataacatagAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTAc                                                                                                      >  1:1041351‑M1/69‑109 (MQ=255)

                                                                        ttagttgtttgacttcagtacaatcttgaagagaaaatttgtaacaggatggtggggtcataacatagAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTAc                                                                                                      <  2:1041351‑M1/41‑1 (MQ=255)

                                                                        aTTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTg                                                                      <  2:503829/141‑1 (MQ=255)

                                                                        aTTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTg                                                                      >  2:100521/1‑141 (MQ=255)

                                                                           aaaaCAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTAAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTa                                                                   <  2:580985/141‑1 (MQ=255)

                                                                              aCAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACaa                                                                >  2:959006/1‑141 (MQ=255)

                                                                              aCAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACaa                                                                >  1:642053/1‑141 (MQ=255)

                                                                              aCAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACaa                                                                >  2:653797/1‑141 (MQ=255)

                                                                                 aTTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAAtt                                                             >  2:636611/1‑141 (MQ=255)

                                                                                 aTTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTCTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAAtt                                                             >  2:844673/1‑141 (MQ=255)

                                                                                  ttttATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAAttt                                                            >  2:125536/1‑141 (MQ=255)

                                                                                    ttATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTtc                                                          >  2:221960/1‑141 (MQ=255)

                                                                                      aTCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTTTGATTTTACCATCCTGTTACAAATTTtctt                                                        >  2:1045088/1‑140 (MQ=255)

                                                                                      aTCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTtctc                                                        >  2:639295/1‑141 (MQ=255)

                                                                                      aTCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTtctc                                                        >  1:797785/1‑141 (MQ=255)

                                                                                      aTCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTtctc                                                        >  1:798420/1‑141 (MQ=255)

                                                                                      aTCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTtctc                                                        >  1:798546/1‑141 (MQ=255)

                                                                                       tCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTctct                                                       <  1:673410/141‑1 (MQ=255)

                                                                                        cAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCtt                                                      <  1:821682/141‑1 (MQ=255)

                                                                                          aTTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCa                                                    <  2:371260/141‑1 (MQ=255)

                                                                                            tAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAg                                                  <  2:103970/141‑1 (MQ=255)

                                                                                             aaTGCCACAATGAGATAAACTAATATTGAATCTNGAANTTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTNCAAGa                                                 >  1:369759/1‑141 (MQ=255)

                                                                                              aTGCCACAATGAGATAAACTACTATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAACTCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGAt                                                <  1:820919/141‑1 (MQ=255)

                                                                                              aTGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGAt                                                <  1:498654/141‑1 (MQ=255)

                                                                                                gCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTg                                              >  1:89814/1‑141 (MQ=255)

                                                                                                   acaATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTAc                                           >  1:747782/1‑141 (MQ=255)

                                                                                                     aaTGAGATAAACTAATATTGAGTCTCGAAATTAAATGTAAAAAGGCAGTAATATGATTTTCAAGTAATAAAAGCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTg                                         >  1:381872/1‑141 (MQ=255)

                                                                                                     aaTGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTg                                         <  1:100521/141‑1 (MQ=255)

                                                                                                      aTGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGa                                        >  1:843498/1‑141 (MQ=255)

                                                                                                       tGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGaa                                       >  2:607938/1‑141 (MQ=255)

                                                                                                       tGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGaa                                       <  1:205393/141‑1 (MQ=255)

                                                                                                           aTAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCa                                   <  2:443205/141‑1 (MQ=255)

                                                                                                            tAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTTAAGATTGTACTGAAGTCaa                                  >  2:365464/1‑141 (MQ=255)

                                                                                                             aaaCTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCaaa                                 <  1:214991/141‑1 (MQ=255)

                                                                                                               aCTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAaaca                               <  1:228074/141‑1 (MQ=255)

                                                                                                                cTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAaacaa                              <  2:621874/141‑1 (MQ=255)

                                                                                                                      ttGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATa                        >  2:837425/1‑141 (MQ=255)

                                                                                                                       tGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATAc                       <  2:838273/141‑1 (MQ=255)

                                                                                                                          aTCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATACttt                    <  2:507398/141‑1 (MQ=255)

                                                                                                                          aTCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATACttt                    <  1:639295/141‑1 (MQ=255)

                                                                                                                          aTCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATACttt                    >  2:143909/1‑141 (MQ=255)

                                                                                                                          aTCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATACttt                    <  1:160731/141‑1 (MQ=255)

                                                                                                                              cGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATACTTTATaa                >  2:242635/1‑141 (MQ=255)

                                                                                                                               gAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATACTTTATAAg               >  2:68164/1‑141 (MQ=255)

                                                                                                                                      aattTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATACTTTATAAGTTTTGaa        >  2:342061/1‑141 (MQ=255)

                                                                                                                                        tttAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATACTTTATAAGTTTTGAATg      <  1:832522/141‑1 (MQ=255)

                                                                                                                                            AAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATACTTTATAAGTTTTGAATGCtat  <  1:681354‑M1/141‑1 (MQ=255)

GAATTAGCTTTTTCACATATCATAGATCTGATGCAGACATTGAAATTGTTGAAGAAGACTTTGATTTATAACATTAAAACAATTTTATCAATTAATGCCACAATGAGATAAACTAATATTGAATCTCGAAATTAAATTTAAAAAAGCAGTAAGATTATTTTCAATTAAGAAAATCTCTTACTGCTTTTTCTATGTTATGACCCCACCATCCTGTTACAAATTTTCTCTTCAAGATTGTACTGAAGTCAAACAACTAATACTTTATAAGTTTTGAATGCTAT  >  CP000730/2008802‑2009082

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.