New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2609395 =83 (0.940)3 (0.040) 3/234 NT 4.0% intergenic (‑225/‑210) USA300HOU_2471/USA300HOU_2472 hypothetical protein/hypothetical protein
?CP000730 2609451 = 68 (0.850)intergenic (‑281/‑154) USA300HOU_2471/USA300HOU_2472 hypothetical protein/hypothetical protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 105 total aligned reads displayed.

CATGAATTTCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGT  >  CP000730/2609255‑2609535
                                                                                                                                            |                                                                                                                                             
aaaggcgaagaatgaacgggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaa                                                                                                                                               >  1:875403‑M1/141‑141 (MQ=255)
  aggcgaagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaaaa                                                                                                                                             >  1:53167‑M1/139‑141 (MQ=255)
   ggcgaagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaaaaa                                                                                                                                            <  2:616430‑M1/4‑1 (MQ=255)
   ggcgaagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaaaaa                                                                                                                                            <  1:816513‑M1/4‑1 (MQ=255)
   ggcgaagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaaaaa                                                                                                                                            <  1:601761‑M1/4‑1 (MQ=255)
   gAATTTCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTaaaa                                                                                                                                            <  2:362344/141‑1 (MQ=255)
    gcgaagaatgaactggatgatattagtaagaaattaaagaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAg                                                                                                                                           <  1:620525‑M1/5‑1 (MQ=255)
     cgaagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGc                                                                                                                                          >  2:649114‑M1/136‑141 (MQ=255)
     aTTTCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGc                                                                                                                                          <  1:634949/141‑1 (MQ=255)
     aTTTCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGc                                                                                                                                          <  1:941742/141‑1 (MQ=255)
     aTTTCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGc                                                                                                                                          <  1:296122/141‑1 (MQ=255)
      tttCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCt                                                                                                                                         >  1:757038/1‑141 (MQ=255)
      gaagaatgaactggattatattagtaagaaattaaagaatattctaagaacggaagtttaatagcttatatgattcttggagctaagacagcgtgcgttcattcatgccattattaatataagcaccgcaacaaACAAGCt                                                                                                                                         >  2:508048‑M1/135‑141 (MQ=255)
       aagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCtt                                                                                                                                        <  1:378097‑M1/8‑1 (MQ=255)
       aagaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCtt                                                                                                                                        <  1:859511‑M1/8‑1 (MQ=255)
        agaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCTTc                                                                                                                                       <  1:372662‑M1/9‑1 (MQ=255)
         gaatgaactggatgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCTTCt                                                                                                                                      <  1:791335‑M1/10‑1 (MQ=255)
          cAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTa                                                                                                                                     >  1:510755/1‑141 (MQ=255)
            aataaataAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAAc                                                                                                                                   >  2:331672/1‑141 (MQ=255)
               aaataaaGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATg                                                                                                                                >  1:1051904/1‑141 (MQ=255)
                  taaaGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATa                                                                                                                             >  1:616430/1‑141 (MQ=255)
                    atgatattagtaagaaattaaaaaatattcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCTTCTAACATGATAC‑g                                                                                                                          >  1:151980‑M1/121‑141 (MQ=255)
                     aGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑gg                                                                                                                         >  1:447008/1‑141 (MQ=255)
                        gATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTCTAGACATTAAAAGCTTCTAACATGATAC‑GGAat                                                                                                                      <  1:562512/141‑1 (MQ=255)
                          tttGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAatat                                                                                                                    >  1:197225/1‑141 (MQ=255)
                          tttGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAatat                                                                                                                    <  2:781602/141‑1 (MQ=255)
                             gtgaaatacatCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAg                                                                                                                 >  2:950602/11‑141 (MQ=255)
                             gtgATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAg                                                                                                                 <  2:22568/141‑1 (MQ=255)
                              tgATGTATTTCACAAATTTCTCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGANTATGAgg                                                                                                                >  2:816513/1‑141 (MQ=255)
                              tgATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAgg                                                                                                                >  1:893930/1‑141 (MQ=255)
                              tgATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAgg                                                                                                                >  2:880454/1‑141 (MQ=255)
                              tgATGTATTTCACAAATTTATCACCATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGGTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAgg                                                                                                                <  2:86425/141‑1 (MQ=255)
                                 tGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTc                                                                                                             <  2:620801/141‑1 (MQ=255)
                                 tGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGCCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTc                                                                                                             <  2:226556/141‑1 (MQ=255)
                                   tATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCt                                                                                                           <  1:797837/141‑1 (MQ=255)
                                         acaAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTTAGAAAATATGATAATATGTAGATGTTCTGGAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATca                                                                                                     >  1:919633/1‑141 (MQ=255)
                                             aTTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACAtt                                                                                                 <  1:325122/141‑1 (MQ=255)
                                                tcaaagaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGa                                                                                              >  1:261306‑M1/93‑141 (MQ=255)
                                                tATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGa                                                                                              >  1:125265/1‑141 (MQ=255)
                                                  tCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAg                                                                                            >  1:612967/1‑141 (MQ=255)
                                                  tCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGATTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAg                                                                                            >  1:800466/1‑141 (MQ=255)
                                                    agaacggaagtttaatagcttatatgattcttggagctaagacagcatgcgttcattcatgccattattaatataagcaccgcaacaaAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCt                                                                                          >  1:730904‑M1/89‑141 (MQ=255)
                                                    aCTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCt                                                                                          <  1:839505/141‑1 (MQ=255)
                                                      tATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCttt                                                                                        <  1:668356/141‑1 (MQ=255)
                                                        ttttGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTACTGTATCACATTAGAAGCttttt                                                                                      <  1:991759/141‑1 (MQ=255)
                                                         tttGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAGTGTAGATGTTCTTTAGACATTAAAAGCTTCTAATGTGATTCAGGAACCTCATATTCC‑GTATCATGTTAGAAGCttttaa                                                                                     <  2:979129/141‑3 (MQ=18)
                                                            ggAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTttgtt                                                                                  >  1:552934/1‑141 (MQ=255)
                                                             gAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACCTGCTAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTttgttg                                                                                 >  1:284888/1‑141 (MQ=255)
                                                              aaaaTTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGc                                                                                >  2:256556/1‑141 (MQ=255)
                                                                aaTTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCgg                                                                              <  2:649319/141‑1 (MQ=255)
                                                                aaTTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCgg                                                                              >  2:552689/1‑141 (MQ=255)
                                                                       aaaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtat                                                                       <  2:730368/141‑1 (MQ=255)
                                                                       aaaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtat                                                                       <  1:377566/141‑1 (MQ=255)
                                                                        aaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGCTGTTCTTTCGCCATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtata                                                                      <  1:487379/141‑1 (MQ=255)
                                                                        aaTATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTtata                                                                      <  1:245990/141‑1 (MQ=255)
                                                                           atTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTTCTGTGCTTATATta                                                                   >  2:391143/1‑141 (MQ=255)
                                                                              tAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTATCACATGCTAA‑GGAATATGAGACTCCTGCGTCCCATTAGAAGCTTTTTTGTTGCGGAGCTTATATtaata                                                                >  1:702098/1‑141 (MQ=255)
                                                                               aaTTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATtaataa                                                               <  1:762217/141‑1 (MQ=255)
                                                                                aTTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTaataat                                                              >  2:328925/1‑141 (MQ=255)
                                                                                    tataAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGCTGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCa                                                          <  1:300596/141‑1 (MQ=255)
                                                                                     ataAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCat                                                         >  1:227351/1‑141 (MQ=255)
                                                                                        aaaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGTTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgaa                                                      <  1:783667/141‑1 (MQ=255)
                                                                                        aaaGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgaa                                                      <  2:501366/141‑1 (MQ=255)
                                                                                         aaGGTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatggat                                                     >  2:287409/1‑141 (MQ=255)
                                                                                            tttAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCatgcgttca                                                  <  1:917689/141‑7 (MQ=255)
                                                                                             ttAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAAc                                                 <  1:566389/141‑1 (MQ=255)
                                                                                              taataaGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACg                                                <  1:100336/141‑1 (MQ=255)
                                                                                                ataaGTCAGAAAATATTATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCa                                              <  2:598842/141‑1 (MQ=255)
                                                                                                ataaGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGATGTTCCTGTATCACATTAGAAGCTTGTTTGTTTCGGTGCTTATATTAATAATGGCATGAATGAACGCa                                              <  1:933333/141‑1 (MQ=255)
                                                                                                 taaGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTTTTGTTCTTATATTAATAATGGCATGAATGAACTCAt                                             >  2:1042272/1‑141 (MQ=255)
                                                                                                 taaGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCAt                                             >  1:281028/1‑141 (MQ=255)
                                                                                                   aGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGc                                           <  1:819512/141‑1 (MQ=255)
                                                                                                   aGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGc                                           <  2:196068/141‑1 (MQ=255)
                                                                                                    gTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCt                                          >  1:490916/1‑141 (MQ=255)
                                                                                                     tCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTg                                         >  1:921157/1‑141 (MQ=255)
                                                                                                      cAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGt                                        <  1:309971/141‑1 (MQ=255)
                                                                                                       aGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTc                                       >  2:947892/1‑141 (MQ=255)
                                                                                                        gAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTTCGTTTCTTATATTAATAATGGCATGAATGAACGCATGCTGTCt                                      >  2:304765/1‑141 (MQ=255)
                                                                                                        gAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCt                                      <  2:447008/141‑1 (MQ=255)
                                                                                                         aaaaTATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTGCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCtt                                     >  1:792656/1‑141 (MQ=255)
                                                                                                            atatGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTTCTTTTCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGc                                  >  2:253592/1‑141 (MQ=255)
                                                                                                            atatGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGc                                  <  1:63451/141‑1 (MQ=255)
                                                                                                             tatGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCt                                 <  1:95441/141‑1 (MQ=255)
                                                                                                              atGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTc                                <  1:437363/141‑1 (MQ=255)
                                                                                                               tGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTcc                               <  1:701376/141‑1 (MQ=255)
                                                                                                                gATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTTTTTTTTTTTTTATTTTAATATTGGCATCCATGAATATATGCTATCATAGCTctt                              >  2:1075579/1‑139 (MQ=255)
                                                                                                                 aTAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCaa                             >  1:26129/1‑141 (MQ=255)
                                                                                                                  tAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTTCTGTTCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAg                            >  2:825841/1‑141 (MQ=255)
                                                                                                                  tAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAg                            >  1:54450/1‑141 (MQ=255)
                                                                                                                       tGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAgtttcaggaatcg                       >  1:636131/1‑129 (MQ=255)
                                                                                                                            atgtgctggaGACATGAAAATCTGCTAACATGATAC‑ATAATAGGATTTTCCTTGATCACATGATAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATaa                  <  1:593744/132‑1 (MQ=255)
                                                                                                                            aTGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATaa                  >  2:30539/1‑141 (MQ=255)
                                                                                                                               ttCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCt               <  1:977658/141‑1 (MQ=255)
                                                                                                                                  tttAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTAtt            <  2:1070314/141‑1 (MQ=255)
                                                                                                                                    tAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTaa          >  1:846063/1‑141 (MQ=255)
                                                                                                                                     aGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTATTTCGGTTCTTATATTAATAACGGCATTAATGTACTCATGCTGTCTTAGCTGCTAGTATCATATAAGCTATTaaa         >  2:729694/1‑141 (MQ=255)
                                                                                                                                        cATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGGATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACtt      <  1:287409/141‑1 (MQ=255)
                                                                                                                                        cATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACtt      <  2:379551/141‑1 (MQ=255)
                                                                                                                                           tAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCg   >  1:803313/1‑141 (MQ=255)
                                                                                                                                            AAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACttcctt  <  2:290577‑M1/141‑3 (MQ=255)
                                                                                                                                            |                                                                                                                                             
CATGAATTTCCAAATAAATAAAGGGATTTGTGATGTATTTCACAAATTTATCACTATTTTGGAAAATTAAGAAATATTTAATTATATAAAAGTTTAATAAGTCAGAAAATATGATAAAATGTAGATGTTCTTTAGACATTAAAAGCTTCTAACATGATAC‑GGAATATGAGGTTCCTGTATCACATTAGAAGCTTTTTTGTTGCGGTGCTTATATTAATAATGGCATGAATGAACGCATGCTGTCTTAGCTCCAAGAATCATATAAGCTATTAAACTTCCGT  >  CP000730/2609255‑2609535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.