Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 618,387 T→C 8.9% D1163D (GAT→GAC sdrD → Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrD

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730618,3870TC 8.9% 266.2 / 2.1 109D1163D (GAT→GACsdrDSer‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrD
Reads supporting (aligned to +/- strand):  ref base T (50/47);  new base C (9/3);  total (59/50)
Fisher's exact test for biased strand distribution p-value = 2.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 130 total aligned reads displayed.

GGATACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTC  >  CP000730/618247‑618527
                                                                                                                                            |                                                                                                                                            
ggATACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCgat                                                                                                                                              <  1:318996/141‑1 (MQ=255)
  aTACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCgattc                                                                                                                                            <  2:429414/141‑1 (MQ=255)
   tactacGAAGAATACACATCAGATAGCGGCTCAGATTCGGACAGCTACTCAGATTCAGACAGAGACTCAGACTCAGAGAGTGATTCAGACTCGGATAGCGATGCAGAGTCAGACAGCGATTCAGATTCAGATAGCgattca                                                                                                                                           <  2:157542/141‑1 (MQ=18)
    actacGAAGAAGAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCgattcag                                                                                                                                          >  1:538489/1‑141 (MQ=255)
    actacGAAGAAGAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGACTCAGAATCAGAAAGCGATTCAGACTCAGAGAGCgactcag                                                                                                                                          >  2:295112/1‑141 (MQ=14)
    actacGAAGAAGAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGAGTCAGACTCGGATAGCGCCTCAGATTCAGACAGCGAGTCAGACTCAGATAGCgactcag                                                                                                                                          >  2:672749/1‑141 (MQ=14)
     ctacGAAGAAGAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCgattcaga                                                                                                                                         <  1:414031/141‑1 (MQ=255)
      tacGAAGAAGAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCgattcagat                                                                                                                                        <  1:36205/141‑1 (MQ=255)
        cGAAGAAGAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCgattcagattc                                                                                                                                      <  1:1067472/141‑1 (MQ=255)
        cGAAGAAGAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCgattcagattc                                                                                                                                      >  1:589198/1‑141 (MQ=255)
         gaagaagaaACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCgattcagattca                                                                                                                                     >  1:853335/1‑141 (MQ=255)
           agaagaaACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGAttcagattcaga                                                                                                                                   >  1:739173/1‑141 (MQ=255)
            gaagaaACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTcagac                                                                                                                                  >  1:584551/1‑141 (MQ=255)
               gaaACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGACTCAGATTCAGACAGCGATTCAGATTCAGATAGCGACTCAGATTcagacagc                                                                                                                               >  2:70816/1‑140 (MQ=255)
               gaaACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGATTCAGAGTCAGAAAGCGACTCAGATAcagacaga                                                                                                                               >  2:978080/1‑141 (MQ=14)
                aaaCATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGCTAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACagag                                                                                                                              <  1:647049/141‑1 (MQ=255)
                  aCATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGAc                                                                                                                            >  2:75178/1‑141 (MQ=255)
                  aCATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGAc                                                                                                                            >  1:500389/1‑141 (MQ=255)
                   cATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACt                                                                                                                           <  2:357963/141‑1 (MQ=255)
                    aTCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTc                                                                                                                          <  1:909641/141‑1 (MQ=255)
                      cAGATAGCGACTCAGATTCGGACAGCGACTCAGACTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAg                                                                                                                        <  2:927234‑M2/141‑2 (MQ=255)
                          tAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAg                                                                                                                    <  1:448746/141‑1 (MQ=255)
                              gACTCAGATTCGGACAGCGACTCAGACTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGAGAGCGATTCAGATTCAGATAGCGACTCAGATACAGAGAGAGAGTCAGATAgaggg                                                                                                                >  2:336381/1‑137 (MQ=14)
                                cTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACGCAGATAGTGAGTCAGACTCAGAGAGCGACTCAGATTCAGACAGCGATTCAGATTCAGAGAAAGACTCAGATTCAGACAGAGACTCAgatacagatag                                                                                                              <  2:941311‑M2/141‑12 (MQ=255)
                                      ttCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGATAGAGACTCAGATAGTGATTCAGACTc                                                                                                        >  2:358629/1‑141 (MQ=255)
                                         ggACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGa                                                                                                     <  2:554534/141‑1 (MQ=255)
                                          gACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGAGTCAGATTCAGACAGCGATTCAGATTCAGATAGCGACTCAGATTCAGACAGAGACTCAGATAGTGATACAGACTCAGAt                                                                                                    >  2:242634/1‑141 (MQ=255)
                                            cAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATag                                                                                                  >  1:385068/1‑141 (MQ=255)
                                            cAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGGGATTCAGACTCAGATag                                                                                                  >  2:485297/1‑141 (MQ=255)
                                               cGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATACAGACTCAGATagcga                                                                                               >  1:461257/1‑141 (MQ=255)
                                                gACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgac                                                                                              <  2:959248/141‑1 (MQ=255)
                                                  cTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGACTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgactc                                                                                            >  2:508017/1‑141 (MQ=255)
                                                  atCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGAATCAGATTCAGACAGCGATTCAGAAGCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgactc                                                                                            <  2:970459/140‑1 (MQ=255)
                                                      gATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgactcagat                                                                                        >  1:198754/1‑141 (MQ=255)
                                                      gATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGACTCAGACTCAGACAGCGACTCAgatacagataccgactcagatcccgactccgac                                                                                        <  2:565019‑M2/141‑34 (MQ=255)
                                                        ttCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATACTGATTCAGACTCAGATagcgacgcagatta                                                                                      >  2:158750/1‑140 (MQ=255)
                                                          cagacagaGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATGCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgactcagattcag                                                                                    >  1:648771/1‑141 (MQ=255)
                                                           agacagaGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgactcagattcaga                                                                                   <  2:24395/141‑1 (MQ=255)
                                                            gacagaGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGAGATTCAGACTCAGATagcgactcagattcagac                                                                                  >  2:241523/1‑141 (MQ=255)
                                                                 agactcagactcAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATa                                                                                                   <  2:232207/119‑1 (MQ=255)
                                                                    ctcagactcagaTAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgactcagattcagacagcgactc                                                                          <  1:301869/141‑1 (MQ=255)
                                                                    ctcagactcagaTAGTGATTCAGACTCGGATAGCGATTCAGAATCAGACAGCGATCCAGATTCAGAAAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATCCAGACTCAGATagcgacgcagactcagacagcgactc                                                                          >  1:391784/1‑141 (MQ=21)
                                                                    ctcagactcagaTAGTGATTCAGACTCAGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGACTCAGACTCAGACACAGACACAGACACCGATACAGACTCAGACagagatgcagattcacactccgcctc                                                                          >  2:745110/1‑133 (MQ=14)
                                                                     tcagactcagaTAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgactcagattcagacagcgactca                                                                         >  1:525543/1‑141 (MQ=255)
                                                                          ctcagaTAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgactcagattcagacagcgactcagattc                                                                    <  1:1036926/141‑1 (MQ=255)
                                                                          ctcagaTAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgactcagattcagacagcgactcagattc                                                                    >  1:427264/1‑141 (MQ=255)
                                                                              tatatTGATTCAGACTCGGATAGCGATTCAGATGCAGACAGCGATTCAGATTCAGATAGCGATTCAGACTCAGACAAAGACTCTGGCAGTGAGTCAGACTCAGATagcgactcagagtcagacagcgactcagattcagac                                                                <  2:218091/140‑1 (MQ=18)
                                                                              gaTAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgactcagattcagacagcgactcagattcagac                                                                >  1:530985/1‑141 (MQ=255)
                                                                              gaTAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGAGATTCAGACTCAGATagcgacaccgactcagacagcgactgagactcagac                                                                >  2:494440/1‑141 (MQ=21)
                                                                              gaTAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATCCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATagcgactcagattcagacagcgactcagattcagac                                                                <  1:11391/141‑1 (MQ=255)
                                                                                 aGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCgactcagattcagacagcgactcagattcagacagc                                                             >  1:159232/1‑141 (MQ=255)
                                                                                  gTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGACTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGactcagattcagacagcgacacagattcagagagcg                                                            >  2:668934/1‑141 (MQ=255)
                                                                                    gATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACtcagattcagacagcgactcagattcagacagcgac                                                          <  1:689010/141‑1 (MQ=255)
                                                                                       tCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGACTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAgattcagacagcgactcagattcagacagcgactca                                                       >  1:223207/1‑141 (MQ=255)
                                                                                       tCAGACACAGATAGAGATTCAGAATCAGACAGAGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAgattcagacagcgactcagattcagacagcgactca                                                       <  2:65327/141‑1 (MQ=18)
                                                                                        cAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGattcagacagcgactcagattcagacagcgactcag                                                      <  1:116153/141‑1 (MQ=255)
                                                                                        cAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGattcagacagcgactcagattcagacagcgactcag                                                      >  1:399299/1‑141 (MQ=255)
                                                                                           acacGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCgactcagact                                                   <  1:663933/138‑1 (MQ=255)
                                                                                            cTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATATTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCgactcagactc                                                  <  1:83774/141‑1 (MQ=255)
                                                                                              cGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGactcagactcag                                                >  2:409683/1‑141 (MQ=255)
                                                                                               ggATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGActcagactcaga                                               <  2:310881/141‑1 (MQ=255)
                                                                                               ggATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGActcagactcaga                                               <  1:600476/141‑1 (MQ=255)
                                                                                                  tAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAg                                            >  1:592091/1‑141 (MQ=255)
                                                                                                    gCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTGAGACTCAGATAGCGACTCAGAATCGGACAGCGACGGGGAATCGGAGAGGGACTCAGACTCAGATAGTg                                          >  2:65815/1‑141 (MQ=18)
                                                                                                              tgcagacggaaaatcagatgcagatGGCGATTCAGATCCAGACAGTGACTCAGATAGTGATTCAGCCTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTc                                <  1:842003/128‑1 (MQ=17)
                                                                                                               tcagaCAGAGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCa                               <  1:372472/141‑1 (MQ=255)
                                                                                                                cagaCAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAg                              >  2:1048931/1‑141 (MQ=255)
                                                                                                                cagaCAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAg                              >  1:484549/1‑141 (MQ=255)
                                                                                                                 agaCAGCGATTCAGATTCAGATAGCGATTCAGATTCCGACAGTGACTCAgattccgacagtgactcggattcagatagcgattcagattcagacagcgactcagactcagacagcgattcagactcagagagcgactcaga                             <  2:629364‑M2/141‑93 (MQ=255)
                                                                                                                 agaCAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGa                             >  2:493575/1‑141 (MQ=255)
                                                                                                                 agaCAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGa                             <  1:408962/141‑1 (MQ=255)
                                                                                                                  gaCAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGAt                            <  1:673135/141‑1 (MQ=255)
                                                                                                                  gaCAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGAt                            >  2:672798/1‑141 (MQ=255)
                                                                                                                    cAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAg                          >  1:241889/1‑141 (MQ=255)
                                                                                                                    cAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAg                          <  2:240860/141‑1 (MQ=255)
                                                                                                                    cAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGCGACTCAGATTCGGACAGCGACTCAGACTCTGATAg                          <  1:777987/141‑1 (MQ=14)
                                                                                                                      gCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCg                        >  1:701808/1‑141 (MQ=255)
                                                                                                                       cGATTCAGAGTCAGACAGCGACTCCGAGTCAGACAGAGGCTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGa                       <  2:648720/141‑1 (MQ=17)
                                                                                                                       agactcagattctgatAGCGATTCAGATTCAGAAAGAGATTCAGATACTGATGCAGGCTCAGATAGCGACGCAGAGTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGa                       <  2:538489/137‑1 (MQ=18)
                                                                                                                        gattcagattcaGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGAc                      <  1:511685/141‑1 (MQ=255)
                                                                                                                        gatgcagaaacaGATAGAGATTCAGATACAGACAAAGATTCAGAAGATGAAGAAGGTTCAGATAGCGACTCAGATTCAGAGAGTGACGCAGATTCAGACAGCGACACAGGCTCAGATAGTGATTCAGACTCAGATAGCGAc                      <  2:43082/141‑1 (MQ=9)
                                                                                                                         attcagattcagATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACt                     >  2:232773/1‑141 (MQ=255)
                                                                                                                           tcagattcagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGGGATTCAGACTCAGATAGCGAcaca                   >  2:86090/1‑141 (MQ=255)
                                                                                                                            cagattcagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAg                  >  1:1001628/1‑141 (MQ=255)
                                                                                                                            cagattcagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAg                  <  1:790740/141‑1 (MQ=255)
                                                                                                                            cagattcagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACGCAGACTCAGATAGCGATTCAGACTCAGATAGCGACTCAg                  >  2:784924/1‑141 (MQ=255)
                                                                                                                             agattcagatAGAGATTCAGATTCAGACTGTGACTCAGACACAGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGa                 <  2:787504/141‑1 (MQ=17)
                                                                                                                              gattcagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACTGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACACAGAt                >  2:1050585/1‑141 (MQ=255)
                                                                                                                               attcagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGAtt               >  1:923020/1‑141 (MQ=255)
                                                                                                                                ttcagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGAGTCAGACAGCGACCCAGAATCAGACAGTGATACAGCCTCCGATAGCGaaagagagtc              >  2:1078620/1‑132 (MQ=18)
                                                                                                                                  cagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATtcag            >  2:1023229/1‑141 (MQ=255)
                                                                                                                                  cagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATtcag            >  1:260946/1‑141 (MQ=255)
                                                                                                                                  cagatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGAGTCAGACAGCGACACAGACACAGACAGTGACACCGACTGACACAACAACTCAGAAtcgg            >  2:384546/1‑139 (MQ=17)
                                                                                                                                   agatAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCAGACAGCGACTCAGACTCAGATAGGGATTCAGACTCAGATAGCGACTCAGATtcaga           >  2:14814/1‑141 (MQ=255)
                                                                                                                                    gatacagattcaaattcaGATAGTGACTCAGATGGTGATTGAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGTGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATtcagac          <  2:874614/135‑1 (MQ=17)
                                                                                                                                    gacagcgATTCAGACTCAGATAGCGACTCAgattcagacagcgactcagactcagatagcgattcagattcagacagcgactcagattcagacagcgattcagattcagatagcgattcagattcagacagcgactcagat          <  1:1012559‑M2/138‑112 (MQ=255)
                                                                                                                                          gattcagactcaGACAGCGACTCAgattcagacagtgattcagactcagatagcgattcagattcagacagcgactcagactcagatagcgactcagactcagacagcgactcagactcagatagcgactcagattcggac    <  1:923375‑M2/141‑118 (MQ=255)
                                                                                                                                            ttcagattcagaCAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATtcagacagcgactc  >  1:1053140/1‑141 (MQ=255)
                                                                                                                                            ttcagattcagaCAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATtcagacagcgactc  >  1:693686/1‑141 (MQ=255)
                                                                                                                                            ttcagaatcagaCAGAGACTCAGAAGATGAATCAGCCTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATtcagacagcgactc  <  2:91323/141‑1 (MQ=17)
                                                                                                                                            |                                                                                                                                            
GGATACTACGAAGAAGAAACATCAGATAGCGACTCAGATTCGGACAGCGACTCAGATTCAGACAGAGACTCAGACTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGATTCAGATTCAGATAGCGATTCAGATTCAGACAGAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTC  >  CP000730/618247‑618527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: