BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	631,338	T→A	5.4%	I204I (ATT→ATA)	USA300HOU_0566 →	possible phosphatase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	631,338	0	T	A	5.4%	357.3 / 9.3	112	I204I (ATT→ATA)	USA300HOU_0566	possible phosphatase
Reads supporting (aligned to +/- strand): ref base T (53/53); new base A (3/3); total (56/56)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.67e-01

Only 100 of 119 total aligned reads displayed.

TTAAATAGCCAACAAACGGTGTATATTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAATTTAAAATAAATAT  >  CP000730/631198‑631476

ttAAATAGCCAACAAACGGTGTATATTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTttatt                                                                                                                                            >  2:91217/1‑141 (MQ=255)

   aaTAGCCAACAAACGGTGTATATTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTttattatt                                                                                                                                         <  1:305317/141‑1 (MQ=255)

    aTAGCCAACAAACGGTGTATATTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTttattatta                                                                                                                                        <  1:687046/141‑1 (MQ=255)

    aTAGCCAACAAACGGTGTATATTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTttattatta                                                                                                                                        <  1:991088/141‑1 (MQ=255)

       gCCAACAAACGGTGTATATTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATg                                                                                                                                     >  2:402973/1‑141 (MQ=255)

               aCGGTGTATATTGGTGATTCAACGCTTGATGTTTAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCa                                                                                                                             >  1:657985/1‑141 (MQ=255)

                 ggTGTATATTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGa                                                                                                                           >  2:172193/1‑141 (MQ=255)

                 ggTGTATATTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGAACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGa                                                                                                                           >  1:333611/1‑141 (MQ=255)

                   tgtATATTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGaaa                                                                                                                         <  1:697326/141‑1 (MQ=255)

                     tataTTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAAtt                                                                                                                       <  1:557105/141‑1 (MQ=255)

                       tatTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTaa                                                                                                                     <  2:414286/141‑1 (MQ=255)

                       tatTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTaa                                                                                                                     <  2:171511/141‑1 (MQ=255)

                        atTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAAt                                                                                                                    <  2:2842/141‑1 (MQ=255)

                        atTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAAt                                                                                                                    <  2:42776/141‑1 (MQ=255)

                        atTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAAt                                                                                                                    <  1:111193/141‑1 (MQ=255)

                        atTGGTGATTCAACATTTGATGTTGAGATGGCGCAACATGCTGGTGTACCATCTGCAGCAGTAACATGGGGAGCACATGATGCAAGGTCATTACTTCATTCAAATCCAGATTTTATAATCAATGATCCATCAGAAATTAAt                                                                                                                    >  1:323824/1‑141 (MQ=255)

                                  cAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGtattat                                                                                                          >  1:824638/1‑141 (MQ=255)

                                  cAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGtattat                                                                                                          >  2:728836/1‑141 (MQ=255)

                                   aaCGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATtata                                                                                                         >  2:425321/1‑141 (MQ=255)

                                    aCGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATaa                                                                                                        >  1:843424/1‑141 (MQ=255)

                                     cGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATaaa                                                                                                       >  1:905878/1‑141 (MQ=255)

                                      gTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATaaaa                                                                                                      >  2:872186/1‑141 (MQ=255)

                                       tttGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAAc                                                                                                     <  1:617604/141‑1 (MQ=255)

                                        ttGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACt                                                                                                    >  2:674651/1‑141 (MQ=255)

                                          gATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTg                                                                                                  >  1:670069/1‑141 (MQ=255)

                                          gATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTg                                                                                                  >  1:520968/1‑141 (MQ=255)

                                           aTGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGt                                                                                                 <  2:1080832/141‑1 (MQ=255)

                                           aTGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGt                                                                                                 >  1:384944/1‑141 (MQ=255)

                                           aTGTTGAGAGGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGt                                                                                                 <  2:298501/141‑1 (MQ=255)

                                            tGTTGAGATGGCGCAACATGCTGGTGTACCATCTGCAGCAGTAACATGGGGAGCACATGATGCAAGGTCATTACTTCATTCAAATCCAGATTTTATAATCAATGATCCATCAGAAATTAATACAGTATTATAAAATTTGtt                                                                                                <  1:174183/141‑1 (MQ=255)

                                            tGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGtt                                                                                                <  1:625347/141‑1 (MQ=255)

                                            tGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGtt                                                                                                >  1:353849/1‑141 (MQ=255)

                                            tGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGtt                                                                                                >  1:220730/1‑141 (MQ=255)

                                             gTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAGTGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTa                                                                                               <  2:215115/141‑1 (MQ=255)

                                                 agaTGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAAc                                                                                           >  1:766330/1‑141 (MQ=255)

                                                      gCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAgaga                                                                                      <  1:674188/141‑1 (MQ=255)

                                                      gCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAgaga                                                                                      >  1:1058805/1‑141 (MQ=255)

                                                      gCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAgaga                                                                                      >  1:397712/1‑141 (MQ=255)

                                                       cacaACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGaa                                                                                     <  2:641544/141‑1 (MQ=255)

                                                             gTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCAt                                                                               <  1:765385/141‑1 (MQ=255)

                                                               gCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATgg                                                                             <  2:64944/141‑1 (MQ=255)

                                                                cTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGt                                                                            >  2:293750/1‑141 (MQ=255)

                                                                cTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGt                                                                            <  1:179614/141‑1 (MQ=255)

                                                                 tGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGtt                                                                           <  2:267160/141‑1 (MQ=255)

                                                                 tGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGtt                                                                           >  1:76596/1‑141 (MQ=255)

                                                                      tGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAAt                                                                      <  2:884267/141‑1 (MQ=255)

                                                                          aTCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCat                                                                  >  2:708788/1‑141 (MQ=255)

                                                                           tCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCata                                                                 >  2:528400/1‑141 (MQ=255)

                                                                             tGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATAtt                                                               <  1:250412/141‑1 (MQ=255)

                                                                               cagcagtaacatGGGGAGCACATGATGCAAGGTCATTACTTCATTCAAATCCAGATTTTATAATCAATGATCCATCAGAAATTAATACAGTATTATAAAATTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCa                                                             <  1:772437/130‑1 (MQ=255)

                                                                               cAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCa                                                             >  1:622386/1‑141 (MQ=255)

                                                                                 gCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATa                                                           >  2:310371/1‑141 (MQ=255)

                                                                                 gCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATa                                                           >  2:310303/1‑141 (MQ=255)

                                                                                 gCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATa                                                           <  1:180574/141‑1 (MQ=255)

                                                                                  cTGTCACTTGGGGTGCACATGATGCAAGGTCATTAGTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATaa                                                          >  1:948154/1‑141 (MQ=255)

                                                                                     taacatGGGGAGCACATGATGCAAGGTCATTACTTCATTCAAATCCAGATTTTATAATCAATGATCCATCAGAAATTAATACAGTATTATAAAATTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAata                                                       <  2:250171/136‑1 (MQ=255)

                                                                                      cACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAatat                                                      >  2:227621/1‑141 (MQ=255)

                                                                                        cTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTa                                                    <  2:693359/141‑1 (MQ=255)

                                                                                              gTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATtat                                              <  2:725043/141‑1 (MQ=255)

                                                                                                 cacaTGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACt                                           <  2:1058805/141‑1 (MQ=255)

                                                                                                   caTGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTa                                         <  2:144048/141‑1 (MQ=255)

                                                                                                     tgatgCAAGGACATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAAAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGa                                       <  2:147722/141‑1 (MQ=255)

                                                                                                       atgCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGaaa                                     >  1:1008814/1‑141 (MQ=255)

                                                                                                       atgCAAGGTCATTACTTCATTCAAATCCAGATTTTATAATCAATGATCCATCAGAAATTAATACAGTATTATAAAATTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACATAGaaa                                     >  1:747771/1‑141 (MQ=255)

                                                                                                         gCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAat                                                        >  1:554436/1‑120 (MQ=255)

                                                                                                         gCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAat                                                        <  2:554436/120‑1 (MQ=255)

                                                                                                         gCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAata                                   >  1:1001265/1‑141 (MQ=255)

                                                                                                         gCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAata                                   <  2:722789/141‑1 (MQ=255)

                                                                                                         gCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAata                                   >  1:977164/1‑141 (MQ=255)

                                                                                                           aaGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATAtt                                 >  1:360900/1‑141 (MQ=255)

                                                                                                           aaGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATAtt                                 <  2:758666/141‑1 (MQ=255)

                                                                                                               tCATTACTTCATTCAAATCCTGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGc                             <  2:605680/141‑1 (MQ=255)

                                                                                                               tCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGc                             >  1:519764/1‑141 (MQ=255)

                                                                                                               tCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGc                             <  2:605814/141‑1 (MQ=255)

                                                                                                               tCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGc                             >  2:585866/1‑141 (MQ=255)

                                                                                                                  ttACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCttt                          >  2:1025240/1‑141 (MQ=255)

                                                                                                                     cTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGa                       >  1:1019335/1‑141 (MQ=255)

                                                                                                                      ttcattcaAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGGTTTAGAt                      <  1:860156/141‑1 (MQ=255)

                                                                                                                      ttcattcaAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGAt                      >  2:750881/1‑141 (MQ=255)

                                                                                                                      ttcattcaAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGAt                      >  1:276424/1‑141 (MQ=255)

                                                                                                                        cattcaAATCCGGTTTTTATTATTTATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTa                    <  2:485937/141‑1 (MQ=255)

                                                                                                                        cattcaAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTa                    <  1:72778/141‑1 (MQ=255)

                                                                                                                          ttcaAATCCGGATTTTATTATTAATGATCCATCAGATATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGGAATATTTCGCTTTAGATTAgg                  <  2:605019/141‑1 (MQ=255)

                                                                                                                          ttcaAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAgg                  <  2:331351/141‑1 (MQ=255)

                                                                                                                          ttcaAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAgg                  >  2:570643/1‑141 (MQ=255)

                                                                                                                           tcaAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGa                 >  1:1015688/1‑141 (MQ=255)

                                                                                                                             aaaTCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAAt               <  1:318742/141‑1 (MQ=255)

                                                                                                                              aaTCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAAtt              <  2:220730/141‑1 (MQ=255)

                                                                                                                              aaTCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAAtt              >  2:491669/1‑141 (MQ=255)

                                                                                                                              aaTCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGAGTATACTTAGAAATATTTCGCTTTAGATTAGGAAtt              <  1:29239/141‑1 (MQ=255)

                                                                                                                               aTCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAAttt             >  1:388724/1‑141 (MQ=255)

                                                                                                                               aTCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAAttt             >  2:905093/1‑141 (MQ=255)

                                                                                                                                  cGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAATTTaaa          <  2:836752/141‑1 (MQ=255)

                                                                                                                                   ggATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAATTTaaaa         <  2:483147/141‑1 (MQ=255)

                                                                                                                                   ggATTTTATTAGTAATGATCCATCAGAGATGAATACCGTATGATGAAAGTTGTTAAGACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTATAAAGATTTCTCTTTAGATGAGGAATTTaaaa         >  2:542444/1‑141 (MQ=255)

                                                                                                                                   agATTTTATAATCAATGATCCATCAGAAATTAATACAGTATTATAAAATTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACATAGAAATATTTCGCTTTAGATTAGGAATGTaaaa         >  2:1022537/2‑141 (MQ=255)

                                                                                                                                     tttttATTATTATTGTTCCATCAGAAATTAATACCGTATTATAAATCTTGTTAAAATAGAGAATTCTATGTTTAAAATTCATATTCATAAATATTAGATTATACTTATAAATATTTCGCTTTATATTAGGAATTTAaaata       <  2:527437/140‑1 (MQ=255)

                                                                                                                                     aTTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAATTTAaaata       <  1:708788/141‑1 (MQ=255)

                                                                                                                                         tattattaATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAATTTAAaataaata   >  1:552266/1‑141 (MQ=255)

                                                                                                                                          attattaATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAATTTAAAATAAatat  >  1:776733/1‑141 (MQ=255)

TTAAATAGCCAACAAACGGTGTATATTGGTGATTCAACGTTTGATGTTGAGATGGCACAACGTGCTGGTATGCAATCTGCAGCTGTCACTTGGGGTGCACATGATGCAAGGTCATTACTTCATTCAAATCCGGATTTTATTATTAATGATCCATCAGAAATTAATACCGTATTATAAAACTTGTTAAAACAGAGAATACCATGGTTAAAATGCATATTCATAAATATTAGATTATACTTAGAAATATTTCGCTTTAGATTAGGAATTTAAAATAAATAT  >  CP000730/631198‑631476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`