Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 1,152,738 A→T 5.5% I329L (ATA→TTA)  dinB → DNA‑directed DNA polymerase IV beta subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0007301,152,7380AT 5.5% 277.3 / 4.3 88I329L (ATA→TTA) dinBDNA‑directed DNA polymerase IV beta subunit
Reads supporting (aligned to +/- strand):  ref base A (37/46);  new base T (2/3);  total (39/49)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01

AATTGAACAAGCTGATGGTACATTAATTCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGATCATTCACAAAGTTTACGTGTT  >  CP000730/1152599‑1152878
                                                                                                                                           |                                                                                                                                            
aaTTGAACAAGCTGATGGTACATTAATTCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAAt                                                                                                                                             <  1:207013/141‑1 (MQ=255)
     aaCAAGCTGATGGTACATTAATTCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGACGGTAGCGAATTCGATAAAGATATATGTAATATCAGTACAATAgatg                                                                                                                                        >  1:209514/1‑141 (MQ=255)
       ccaGCTGATGGTACATTAATTCAATATGATCGTGAAGCCAAGATATATGAACATTTTAATGAGAATTTTATACCACCTGCTATGCGCGAAGATGGTAGCGAATTTGATAAAGATCAAAGTAATATCATTACAATAgatgat                                                                                                                                      >  2:70696/3‑141 (MQ=255)
         aGCTGATGGTACATTAATTCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGatat                                                                                                                                    >  1:410161/1‑141 (MQ=255)
          gCTGATGGTACATTAATTCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATAtt                                                                                                                                   >  1:65374/1‑141 (MQ=255)
           cTGATGGTACATTAATTCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTa                                                                                                                                  <  2:1036238/141‑1 (MQ=255)
               tGGTACATTAATTCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATgg                                                                                                                              >  1:794179/1‑141 (MQ=255)
                ggTACATTAATTCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGt                                                                                                                             >  1:473333/1‑141 (MQ=255)
                ggTACATTAATTCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGt                                                                                                                             >  2:183220/1‑141 (MQ=255)
                    cATTAATTCAATATGATAGTGAAGCTAGGATAGATGAAGATTTTAGTGTGAATTTTATAACACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAGAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGata                                                                                                                         <  2:870196/141‑1 (MQ=255)
                     aTTAATTCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGatat                                                                                                                        <  2:650346/141‑1 (MQ=255)
                          ttCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCata                                                                                                                   <  1:261224/141‑1 (MQ=255)
                          ttCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCata                                                                                                                   <  1:261197/141‑1 (MQ=255)
                           tCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGGTAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCatat                                                                                                                  <  2:280724/141‑1 (MQ=255)
                           tCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCatat                                                                                                                  <  2:348763/141‑1 (MQ=255)
                              atatGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCa                                                                                                               <  1:221764/141‑1 (MQ=255)
                               tatGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCAt                                                                                                              >  1:190060/1‑141 (MQ=255)
                                 tGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATAc                                                                                                            >  2:575412/1‑141 (MQ=255)
                                  gATAGTGAAGCCAAGATATATGAACATTTTAATCTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACa                                                                                                           >  1:563270/1‑141 (MQ=255)
                                         aaGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGtata                                                                                                    <  1:547808/141‑1 (MQ=255)
                                           gCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGt                                                                                                  <  2:674455/141‑1 (MQ=255)
                                           gCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGt                                                                                                  >  2:719105/1‑141 (MQ=255)
                                             cAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGa                                                                                                <  1:623390/141‑1 (MQ=255)
                                             cAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGCTGATATTCATATGCATACAACGTATAGTGa                                                                                                <  2:975917/141‑1 (MQ=255)
                                                 atatatGAACATTTTAATGTGAATTTTATACCCCCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGt                                                                                            <  1:261293/141‑1 (MQ=255)
                                                 atatatGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGt                                                                                            <  2:445492/141‑1 (MQ=255)
                                                  tatatGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTg                                                                                           <  1:537155/141‑1 (MQ=255)
                                                  tatatGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTg                                                                                           >  1:686966/1‑141 (MQ=255)
                                                  tatatGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTg                                                                                           <  1:525203/141‑1 (MQ=255)
                                                   atatGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACATTAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGc                                                                                          <  2:1039686/141‑1 (MQ=255)
                                                   atatGAACATTTTAACGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGc                                                                                          <  1:898900/141‑1 (MQ=255)
                                                        aaCATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGtttt                                                                                     >  1:403355/1‑141 (MQ=255)
                                                            ttttAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTAt                                                                                 <  1:924311/141‑1 (MQ=255)
                                                              ttAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTc                                                                               <  2:915568/141‑1 (MQ=255)
                                                               tAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCg                                                                              <  1:180294/141‑1 (MQ=255)
                                                               tAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCg                                                                              >  1:617156/1‑141 (MQ=255)
                                                               tAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCg                                                                              <  1:894336/141‑1 (MQ=255)
                                                                aaTGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACATTAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCg                                                                                         >  2:637451/1‑129 (MQ=255)
                                                                aaTGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACATTAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCg                                                                                         >  2:637526/1‑129 (MQ=255)
                                                                aaTGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACATTAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCg                                                                                         <  1:637526/129‑1 (MQ=255)
                                                                aaTGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACATTAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCg                                                                                         <  1:637451/129‑1 (MQ=255)
                                                                aaTGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCga                                                                             <  2:51691/141‑1 (MQ=255)
                                                                        ttttATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGt                                                                     <  1:976223/141‑1 (MQ=255)
                                                                        ttttATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGt                                                                     <  2:78967/141‑1 (MQ=255)
                                                                           tataCCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGa                                                                  <  1:356068/141‑1 (MQ=255)
                                                                             taCCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTAt                                                                                 >  1:944903/1‑124 (MQ=255)
                                                                             taCCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTAt                                                                                 <  2:944903/124‑1 (MQ=255)
                                                                             taCCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGCCATGGTAGAAg                                                                >  1:654897/1‑141 (MQ=255)
                                                                             taCCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAg                                                                >  1:872534/1‑141 (MQ=255)
                                                                             taCCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAg                                                                >  2:782876/1‑141 (MQ=255)
                                                                             taCCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAACCGATGATCTTACCGGTGATATTCCTATGCACACAACGAATAGTGCCGGCGCGCTTTGTATCCgacaaccggcagaag                                                                >  1:322318/1‑128 (MQ=255)
                                                                              accaccTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGc                                                               >  2:159945/1‑141 (MQ=255)
                                                                              accaccTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTCTTCTATTCGAGACATGGTAGAAGc                                                               >  2:1017901/1‑141 (MQ=255)
                                                                                caccTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCaa                                                             <  1:922666/141‑1 (MQ=255)
                                                                                 accTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCaaa                                                            >  2:977752/1‑141 (MQ=255)
                                                                                 accTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCaaa                                                            <  1:617419/141‑1 (MQ=255)
                                                                                  ccTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATAGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAat                                                           <  1:788910/141‑1 (MQ=255)
                                                                                   cTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAata                                                          <  2:737243/141‑1 (MQ=255)
                                                                                       tATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGc                                                      <  1:683742/141‑1 (MQ=255)
                                                                                       tATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGc                                                      <  2:641758/141‑1 (MQ=255)
                                                                                           cGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCaaaa                                                  >  2:855088/1‑141 (MQ=255)
                                                                                           cGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCaaaa                                                  >  1:986663/1‑141 (MQ=255)
                                                                                            gagaAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAg                                                 <  1:863619/141‑1 (MQ=255)
                                                                                               aagaTGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGtt                                              <  1:925668/141‑1 (MQ=255)
                                                                                               aagaTGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGtt                                              >  2:207054/1‑141 (MQ=255)
                                                                                                agaTGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTta                                             <  1:83042/141‑1 (MQ=255)
                                                                                                  aTGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTtata                                           <  2:68006/141‑1 (MQ=255)
                                                                                                  aTGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTtata                                           <  2:65374/141‑1 (MQ=255)
                                                                                                    ggTAGCGAATTTGATAAAGATCTAAGTAATAGCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATaaa                                         >  2:1014511/1‑141 (MQ=255)
                                                                                                     gTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAAt                                        >  1:974837/1‑141 (MQ=255)
                                                                                                     gTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAAt                                        >  2:806993/1‑141 (MQ=255)
                                                                                                         cGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGTGTTGTGTTAGAAGCAAATATCGCAAAAGGTTATAAATTCAt                                    <  1:575412/141‑1 (MQ=255)
                                                                                                         cGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCAt                                    <  2:830193/141‑1 (MQ=255)
                                                                                                           aaTTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATgg                                  <  1:830607/141‑1 (MQ=255)
                                                                                                            aTTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGt                                 >  2:801001/1‑141 (MQ=255)
                                                                                                             tttGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATNCATGGTa                                >  2:816261/1‑141 (MQ=255)
                                                                                                              ttGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTaa                               >  2:911262/1‑141 (MQ=255)
                                                                                                              ttGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTaa                               >  2:537261/1‑141 (MQ=255)
                                                                                                               tGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAAt                              <  2:965039/141‑1 (MQ=255)
                                                                                                                     aGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGa                        <  2:986967/141‑1 (MQ=255)
                                                                                                                        tCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGATCa                     >  1:795325/1‑141 (MQ=255)
                                                                                                                        tCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGATCa                     <  1:279597/141‑1 (MQ=255)
                                                                                                                           aaGTAATATCATTACAATAGATCATAATAATGGTGATAGTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAATGTTATAAATTCATGGTAATTACTGATCATTc                  >  2:545931/1‑141 (MQ=255)
                                                                                                                             gTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGATCATTcac                <  2:975395/141‑1 (MQ=255)
                                                                                                                                atatCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGATCATTCACaaa             <  1:16622/141‑1 (MQ=255)
                                                                                                                                    cATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGATCATTCACAAAGttt         >  2:1011311/1‑141 (MQ=255)
                                                                                                                                     aTTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGATCATTCACAAAGTTTa        >  2:629600/1‑141 (MQ=255)
                                                                                                                                       tACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGATCATTCACAAAGTTTACg      >  2:1067/1‑141 (MQ=255)
                                                                                                                                           aTAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGATCATTCACAAAGTTTACGTGtt  >  2:290663/1‑141 (MQ=255)
                                                                                                                                           aTAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGATCATTCACAAAGTTTACGTGtt  >  2:745154/1‑141 (MQ=255)
                                                                                                                                           |                                                                                                                                            
AATTGAACAAGCTGATGGTACATTAATTCAATATGATAGTGAAGCCAAGATATATGAACATTTTAATGTGAATTTTATACCACCTGCTATGCGAGAAGATGGTAGCGAATTTGATAAAGATCTAAGTAATATCATTACAATAGATGATATTAATGGTGATATTCATATGCATACAACGTATAGTGATGGTGCGTTTTCTATTCGAGACATGGTAGAAGCAAATATCGCAAAAGGTTATAAATTCATGGTAATTACTGATCATTCACAAAGTTTACGTGTT  >  CP000730/1152599‑1152878

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑