| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 1,451,633 | C→T | 8.2% | A763A (GCG→GCA) | sucA ← | oxoglutarate dehydrogenase (succinyl‑transferring) E1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 1,451,633 | 0 | C | T | 8.2% | 241.4 / 5.2 | 83 | A763A (GCG→GCA) | sucA | oxoglutarate dehydrogenase (succinyl‑transferring) E1 |
| Reads supporting (aligned to +/- strand): ref base C (32/43); new base T (4/3); total (36/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTTGATATGATTCTGTCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGACCCTCATATGCATGAGG > CP000730/1451493‑1451773 | gCTTGATATGATTCTGTCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGcc < 1:871333/141‑1 (MQ=255) ttGATATGATTCTGTCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGc < 1:212750/141‑1 (MQ=255) tGATATGATTCTGTCAAAATTGGCGCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCt < 1:46984/141‑1 (MQ=255) tatGATTCTGTCAAAATTGGCTCAAATCCGCCAGAAGTACATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGCGGCATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACGAGCGGCTtgt < 2:130719/141‑1 (MQ=255) tatGATTCTGTCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTtgt > 1:1016572/1‑141 (MQ=255) gATTCTGTCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCa > 2:302790/1‑141 (MQ=255) gATTCTGTCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCa < 2:852319/141‑1 (MQ=255) cTGTCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCa > 2:201331/1‑141 (MQ=255) tGTCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGTTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAAACTAAACTAGCCGCTTGTGCACGCaa < 2:164338/141‑1 (MQ=255) gTCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAAt > 1:175152/1‑141 (MQ=255) gTCAAAATTGGCTCAAATCCACCAGAAGTAAACTCATCAATTGGTTTGGCAACTGTTTTATTTCTCAATAAGC‑TTTTTTTTTTTTTTTCAACCAATGGTAGCATTTGTTCATTTTCTAAACTAGCTGCTTGTTAACGCAAt > 2:604220/1‑141 (MQ=255) tCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATa > 2:683492/1‑141 (MQ=255) tCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATa < 2:428222/141‑1 (MQ=255) tCAAAATTGGCTCAAATCCACCAGAAGTAAACTCATCAATTGGTTTGGCAACTGTTTTATTTCTCAATAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCTGCTTGTGCACGCAATa > 1:992103/1‑141 (MQ=255) tttgCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCAGTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGa < 2:255228/138‑1 (MQ=255) ttGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGa < 1:265476/141‑1 (MQ=255) ttGGCTCAAATCCACCAGAAGTAAACTCATCAATTGGTTTGGCAACTGTTTTATTTCTCAATAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCTGCTTGTGCACGCAATAAGTGGa < 1:944587/141‑1 (MQ=255) tGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGaa < 1:421061/141‑1 (MQ=255) tGGCTCAAATCCACCAGAAGTAAACTCATCAATTGGTTTGGCAACTGTTTTATTTCTCAATAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCTGCTTGTGCACGCAATAAGTGGaa > 1:17662/1‑141 (MQ=255) gCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAaat > 1:78194/1‑141 (MQ=255) tCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAaataa < 1:50707/141‑1 (MQ=255) cAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAaataat < 2:231791/141‑1 (MQ=255) cAAATCCACCAGAAGTAAATTCATCAATTGGTTNTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAaataat > 1:906574/1‑141 (MQ=255) cAAATCCAACAGAAGTACACTAACCAATCGGTTTTGCAAGCGTTTTATTTCTCAGTAAGCTTTTTTGGTGACATCACAGCGAATGGTCGCATTTGTTTAGAATCTAACCTAGCCGCGTGTGCACGCAACAAGAGGAaataa > 2:1083049/1‑141 (MQ=255) aaTCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTa < 1:790344/141‑1 (MQ=255) aGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTTCACGCAATAAGTGGAGATAATTACTTGAACTAGa > 1:294715/1‑141 (MQ=255) tAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATa < 1:573540/141‑1 (MQ=255) tAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATa < 1:643017/141‑1 (MQ=255) aaTTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAg < 2:720596/141‑1 (MQ=255) aTTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGt > 1:1070122/1‑141 (MQ=255) ctcatcaATTGGTTTGGCAACTGTTTTATTTCTCAATAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCTGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGtt > 1:190634/2‑141 (MQ=255) tcatcaATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTg > 1:168557/1‑141 (MQ=255) ggTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACtgtg > 2:386958/1‑141 (MQ=255) ggTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACtgtg > 1:447805/1‑141 (MQ=255) ggTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACtgtg < 1:912216/141‑1 (MQ=255) ggTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACtgtg < 2:396658/141‑1 (MQ=255) gTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGc < 1:167113/141‑1 (MQ=255) ttttGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTTTTTTCATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTATGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCa > 2:863466/1‑141 (MQ=255) ttttGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCa < 2:481565/141‑1 (MQ=255) ttGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAat > 1:747472/1‑141 (MQ=255) ttGCAACTGTTCTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAat < 1:766561/141‑1 (MQ=255) tGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGCCATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAatt < 2:999762/141‑1 (MQ=255) tGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTc < 1:201331/141‑1 (MQ=255) ttttATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTcag < 1:57522/141‑1 (MQ=255) aTTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCagcagc > 1:689680/1‑141 (MQ=255) aTTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCagcagc < 1:951384/141‑1 (MQ=255) tcAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAAtt > 1:472660/1‑141 (MQ=255) tcAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAAtt > 1:550038/1‑141 (MQ=255) cAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTg < 1:190706/141‑1 (MQ=255) c‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAAt > 1:228394/1‑141 (MQ=255) tttttGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATc > 1:641227/1‑141 (MQ=255) ttGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGct < 1:857335/141‑1 (MQ=255) ggTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGATAAATGTAAAAATCGctct < 2:396710/141‑1 (MQ=255) aCATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATc < 1:712669/141‑1 (MQ=255) aCATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATc > 1:515214/1‑141 (MQ=255) tAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTg < 2:78194/141‑1 (MQ=255) tAACAACAAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGAAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGAAAAAAAAAAAAAAAATCGCTCTAATCTTg < 2:366210/141‑1 (MQ=255) acaacCAATGGTCGCATTTGTTCAGAATCTCAACTAGCCGCTCGCGCACGCCATACGTGGAAATACTTACTAGCACCAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTATTTGTAACACTTGCTCTAAtaataga > 2:589145/1‑135 (MQ=255) acaacCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCt > 1:794936/1‑141 (MQ=255) caacCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGatctggtgcctatg > 2:134608/1‑131 (MQ=255) caacCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCtg > 2:754309/1‑141 (MQ=255) caacCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCtg < 1:929174/141‑1 (MQ=255) caacCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCGCTAATCTTGCtg > 1:266888/1‑141 (MQ=255) aacCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCtga < 2:447805/141‑1 (MQ=255) aaTGGTCGCATTTGTTCAGAATCTAAACTAGCTGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGaa < 2:992103/141‑1 (MQ=255) aaTGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGaa < 1:302790/141‑1 (MQ=255) ggTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGt > 2:412764/1‑141 (MQ=255) gTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGtt < 2:55293/141‑1 (MQ=255) tCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTc > 1:981320/1‑141 (MQ=255) cGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCa > 1:993363/1‑141 (MQ=255) cGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCa > 1:74195/1‑141 (MQ=255) cATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAgg < 2:994569/141‑1 (MQ=255) cATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAgg < 2:461330/141‑1 (MQ=255) aTTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGc < 1:444946/141‑1 (MQ=255) gTTCAGAATCTAAACTAGCTGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGTCCtt < 2:1074060/141‑1 (MQ=255) aGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGAcc < 1:155705/141‑1 (MQ=255) aGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGAcc < 2:420469/141‑1 (MQ=255) aTCTAAACTAGCCGCTTGTGCACGCAATAAGTGGTAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGACCCTc < 1:1007185/141‑1 (MQ=255) tAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGACCCTCatg < 1:805227/141‑2 (MQ=255) tAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGACCCTCata > 2:109870/1‑141 (MQ=255) tAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGACCCTCata < 1:808220/141‑1 (MQ=255) cTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGACCCTCATATGCa > 1:362467/1‑141 (MQ=255) tAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGACCCTCATATGCAt < 2:492443/141‑1 (MQ=255) gCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGACCCTCATATGCATGa < 2:544314/141‑1 (MQ=255) cGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGACCCTCATATGCATGAgg > 2:613849/1‑141 (MQ=255) | GCTTGATATGATTCTGTCAAAATTGGCTCAAATCCACCAGAAGTAAATTCATCAATTGGTTTTGCAACTGTTTTATTTCTCAGTAAGC‑TTTTTGGTGACATAACAACCAATGGTCGCATTTGTTCAGAATCTAAACTAGCCGCTTGTGCACGCAATAAGTGGAAATAATTACTTGAACTAGATAAGTTGACAACTGTGCAATTATTTTCAGCAGCTAATTGTAAAAATCGCTCTAATCTTGCTGATGAATGTTCAGGCCCTTGACCCTCATATGCATGAGG > CP000730/1451493‑1451773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |