| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 1,963,502 | C→T | 7.6% | T453T (ACG→ACA) | hemG ← | protoporphyrinogen oxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 1,963,502 | 0 | C | T | 7.6% | 312.6 / 9.6 | 104 | T453T (ACG→ACA) | hemG | protoporphyrinogen oxidase |
| Reads supporting (aligned to +/- strand): ref base C (42/54); new base T (2/6); total (44/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
CACATTACTTCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGACATGGTACTGTGGCATACTTTTCGGCA > CP000730/1963362‑1963641 | cacaTTACTTCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGc > 1:965586/1‑141 (MQ=255) acaTTACTTCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCg > 1:1030471/1‑141 (MQ=255) caTTACTTCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGAGATTACTTCTTCAGCAGCAACTTTACCTTGCGt < 2:251592/141‑1 (MQ=255) tACTTCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAAt < 1:1033746/141‑1 (MQ=255) tACTTCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAAt < 2:95219/141‑1 (MQ=255) tACTTCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAAt < 2:798653/141‑1 (MQ=255) cTTCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATAc < 2:1049067/141‑1 (MQ=255) cTTCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATAc < 2:774262/141‑1 (MQ=255) tCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACaa < 2:855103/141‑1 (MQ=255) tCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACaa < 2:799811/141‑1 (MQ=255) ccaccaTTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAAt > 2:914144/1‑141 (MQ=255) ccaccaTTATATAACTTAAAAATGACGATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAAt < 2:861242/141‑1 (MQ=255) ccaTTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGCTTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAg > 1:1024986/1‑141 (MQ=255) tatataACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAg < 1:930744/141‑1 (MQ=255) atataACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGt > 1:89479/1‑141 (MQ=255) tataACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTc > 2:742718/1‑141 (MQ=255) tataACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGAGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTc < 2:130641/141‑1 (MQ=255) taACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCa > 2:818023/1‑141 (MQ=255) taACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCa > 2:818022/1‑141 (MQ=255) aCTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAAc > 1:60930/1‑141 (MQ=255) cTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAAcc < 2:291390/141‑1 (MQ=255) ttAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCg > 1:248576/1‑141 (MQ=255) tAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGc < 1:948793/141‑1 (MQ=255) aaaaTGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGcct > 1:773851/1‑139 (MQ=255) aaaaTGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCtt < 2:748203/141‑1 (MQ=255) aaaaTGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCtt < 1:404770/141‑1 (MQ=255) aaTGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCa < 2:584825/141‑1 (MQ=255) aaTGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCa > 1:383050/1‑141 (MQ=255) aCTATATTTCATCAAACATTATCTCAAGGAGTAGCACCTACACAAACACAATCAAAAAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTACTCCACTCCGGTAGTGCAACCGCTTCAAAAg > 2:539786/1‑141 (MQ=255) aCTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAGCAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAg > 2:285504/1‑141 (MQ=255) aCTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAg > 1:510459/1‑141 (MQ=255) aCTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAg > 1:198087/1‑141 (MQ=255) aCTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAg > 1:724810/1‑141 (MQ=255) aCTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAg > 2:370530/1‑141 (MQ=255) cTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGa < 2:266386/141‑1 (MQ=255) tatTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGTGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGc < 2:1058917/141‑1 (MQ=255) tatTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCGTCAGCAGCAGCTTTACCTTGTGTAATACAGTCAGGTAGTCCAACCGCTTCAAAAGATGc < 2:1058923/141‑1 (MQ=255) catcaAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAg < 1:499259/141‑1 (MQ=255) tcaAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGtt > 1:831473/1‑141 (MQ=255) tcaAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGAACCAGtt < 1:898824/141‑1 (MQ=255) aaCATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTAct < 2:806641/141‑1 (MQ=255) aCATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTActc > 2:906384/1‑141 (MQ=255) cATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGTGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTActct > 1:396547/1‑141 (MQ=255) cATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTActct < 1:473257/141‑1 (MQ=255) cATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTActct < 1:765808/141‑1 (MQ=255) aTTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTa > 1:627387/1‑141 (MQ=255) tATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGTGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAg < 2:40228/141‑1 (MQ=255) aTCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGt < 1:663561/141‑1 (MQ=255) cTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCg < 1:294073/141‑1 (MQ=255) tAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGt > 2:683652/1‑141 (MQ=255) aGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGa > 1:744252/1‑141 (MQ=255) aGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGATTCGAAAGATGCACCAGTTACTCTAAGTCGTGGa < 2:976922/141‑1 (MQ=255) ggCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGTGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGat < 1:595872/141‑1 (MQ=255) ggCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGTGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGat < 1:87055/141‑1 (MQ=255) ggCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGat > 2:1060556/1‑141 (MQ=255) cGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTCCGCCGTGGatat > 2:250654/1‑141 (MQ=255) tCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATAtgt > 2:62890/1‑141 (MQ=255) cGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGTGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATAtgtt > 1:743126/1‑141 (MQ=255) cGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATAtgtt > 1:906533/1‑141 (MQ=255) gCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATAtgttt > 1:125694/1‑141 (MQ=255) ccTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATAtgtttgtt > 1:840193/1‑141 (MQ=255) ccTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATAtgtttgtt > 1:513805/1‑141 (MQ=255) tACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTAAGCAGCAACTTTACCTTGCGTAATACAAGCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTa < 1:919630/141‑1 (MQ=255) acaccaacaccaTCCGACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTGTACCTTGCGTAATACAATCGGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTaa < 1:242344/141‑1 (MQ=255) acaccaacaccaTCCAACAATTAACTTACAACGCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGACGCACCAGTTACTCTAAGTCGTGGATATgttggtttca > 2:227093/1‑139 (MQ=255) caccaaaaccaTCCAACAATTAACTTACAACTCAGCGATTACTTCTTCAGCAACCACTTTACCTAGCGTAATACAATCAGGTAGTCCAACAGCTTCAAACGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAat > 2:544604/1‑141 (MQ=255) accaacaccaTCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAATAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAata < 2:747022/141‑1 (MQ=255) acaccaTCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGTGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATAtgtg > 2:512173/1‑141 (MQ=255) acaccaTCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTGATAtgtg < 1:860978/141‑1 (MQ=255) caccaTCCAACAATTAACTTACAACTCTGCGATTAGTTCTTCTGCAGCAACTTTACCTTGCGTAATAAAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGc > 1:934266/1‑141 (MQ=255) ccaTCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCtt > 1:608241/1‑141 (MQ=255) aacaaTTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCt < 2:352860/141‑1 (MQ=255) aacaaTTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCt < 2:947954/141‑1 (MQ=255) caaTTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATCCAATCAGGTAGTCCAACCGCTTCAAACGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGt < 1:648553/141‑1 (MQ=255) tAACTTACATCTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTaa < 2:61916/141‑1 (MQ=255) aaCTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAAt < 1:1049678/141‑1 (MQ=255) aCAACGCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATttgtt < 1:25287/141‑1 (MQ=255) cAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATttgttg < 2:506305/141‑1 (MQ=255) cAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATttgttg < 2:418583/141‑1 (MQ=255) cAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATttgttg < 2:510368/141‑1 (MQ=255) aCTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGaa < 1:329911/141‑1 (MQ=255) ctctGCGATTACTTCTTCAGCAGCAACTTTAGCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAat < 2:487364/141‑1 (MQ=255) ctctGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAat < 1:762841/141‑1 (MQ=255) tGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATg > 2:746884/1‑141 (MQ=255) cGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGAc < 1:428861/141‑1 (MQ=255) gATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGAcc < 1:353738/141‑1 (MQ=255) aTTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCg > 1:640980/1‑141 (MQ=255) tACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGAc < 1:811480/141‑1 (MQ=255) tACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGAc < 1:226980/141‑1 (MQ=255) aCTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGACa < 2:164813/141‑1 (MQ=255) cttcAGCAGCAACTTTACCTTGTGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGACATGGt < 2:544730/141‑1 (MQ=255) aaCTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGACATGGTACTGTGGCAt < 1:370530/141‑1 (MQ=255) tttACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGACATGGTACTGTGGCATACt > 1:56899/1‑141 (MQ=255) ttACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGGTGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGACATGGTACTGTGGCATACtt < 1:762683/141‑1 (MQ=255) tACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTGTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGACATGGTACTGTGGCATACttt < 1:1053680/141‑1 (MQ=255) ccTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTACTATGTTCTTGAATCTGTCTAATTTGTTGAATATGACCGACATGGTACTGTGGCATGCTTTTc > 2:60327/1‑141 (MQ=255) ccTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGACATGGTACTGTGGCATACTTTTc < 1:746884/141‑1 (MQ=255) cTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGACATGGTACTGTGGCATACTTTTCg > 1:997740/1‑141 (MQ=255) tGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCCAATTTGTTGAACATGACCCACCTCGTCCTGTGGCATACTTTGCGGc > 2:44058/1‑141 (MQ=255) gCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGACATGGTACTGTGGCATACTTTTCGGCa < 1:170652/141‑1 (MQ=255) | CACATTACTTCCACCATTATATAACTTAAAAATGACTATATTTCATCAAACATTATCTAAAGGCGTCGCACCTACACCAACACCATCCAACAATTAACTTACAACTCTGCGATTACTTCTTCAGCAGCAACTTTACCTTGCGTAATACAATCAGGTAGTCCAACCGCTTCAAAAGATGCACCAGTTACTCTAAGTCGTGGATATGTTTGTTTAATATGTGCTTGAATCTGTCTAATTTGTTGAATATGACCGACATGGTACTGTGGCATACTTTTCGGCA > CP000730/1963362‑1963641 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |