| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 2,283,526 | A→C | 5.1% | intergenic (+5194/+2838) | mtlD → / ← glmM | mannitol‑1‑phosphate 5‑dehydrogenase/phosphoglucosamine mutase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 2,283,526 | 0 | A | C | 5.1% | 298.5 / 2.6 | 103 | intergenic (+5194/+2838) | mtlD/glmM | mannitol‑1‑phosphate 5‑dehydrogenase/phosphoglucosamine mutase |
| Reads supporting (aligned to +/- strand): ref base A (50/47); new base C (4/2); total (54/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 104 total aligned reads displayed.
ACTTTTGATTTTGTATCAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCGCTTCAA > CP000730/2283386‑2283665 | aCTTTTGATTTTGTATCAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGa < 1:812739/141‑1 (MQ=255) ttttGATTTTGTATCAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGc < 1:788335/141‑1 (MQ=255) gATTTTGTATCAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCtttt > 1:899601/1‑141 (MQ=255) tGTATCAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGc < 2:402401/141‑1 (MQ=255) tGTATCAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGc < 2:489725/141‑1 (MQ=255) gTATCAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCt < 1:897130/141‑1 (MQ=255) tATCAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTg < 2:331721/141‑1 (MQ=255) aTCAGCTACTTCCTTTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGCGCTTTTCTAGCTGt < 2:585823/141‑1 (MQ=255) cAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTg < 2:735813/141‑1 (MQ=255) cAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTg < 2:903280/141‑1 (MQ=255) cAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTg < 2:658606/141‑1 (MQ=255) cAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTg > 2:972637/1‑141 (MQ=255) agccaCTTCTTGTTGTGATTTAACAACTTGGATGTCATGTAAACCTTCTGTTTGAGCTGCATCTACTGCTGCATTTGCCTCTGCTACTTCTTCATCAGTTGCATTTGAAACTGTAGCATTTTGCGCTTTTCTAGCTGTAGc > 2:954234/5‑141 (MQ=255) aGCAACTTCCTGTTTTGATTTCACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGc < 2:44283/141‑1 (MQ=255) aGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGc > 1:746784/1‑141 (MQ=255) gCATCTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTTCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCa < 2:581008/141‑1 (MQ=255) aCTTCCTGTTTTGATTTAACAACTTGGATGTCATCTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCt < 1:1008262/141‑1 (MQ=255) tCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGt < 2:280398/141‑1 (MQ=255) tCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGt > 1:1052301/1‑141 (MQ=255) tCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGt > 1:536880/1‑141 (MQ=255) ccTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGtt < 2:809638/141‑1 (MQ=255) tGTTTTGATTTAACAACTTGGATGTTATGTAAACCTTGCCTTTTAGCTGCATCTACTGTTGCATCTGCTTCTCCTACTTCTTCTTTTCTTGCATTTGTAACTGTAGCACTTTGAGCTTTCCTAGCTGTTGCAGCTTGTGTa < 2:108501/141‑1 (MQ=255) tGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTa < 2:821031/141‑1 (MQ=255) tGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTa < 2:108267/141‑1 (MQ=255) gTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTaa < 1:453092/141‑1 (MQ=255) gTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCCACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTaa > 2:474704/1‑141 (MQ=255) tGATTTAACAACTTTGTTGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCCTCAGCTTCTGCTACTTCTTCATTTGTTTCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTc < 2:270417/141‑1 (MQ=255) tGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTc > 2:175160/1‑141 (MQ=255) aTTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTagttctat > 1:163839/1‑134 (MQ=255) aTTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCAt < 2:343061/141‑1 (MQ=255) acTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCa < 2:67693/141‑1 (MQ=255) acTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCa > 2:538141/1‑141 (MQ=255) acTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCa > 2:686249/1‑141 (MQ=255) acTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCa > 2:538048/1‑141 (MQ=255) ggATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCa > 1:838604/1‑141 (MQ=255) aTGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCAtt > 1:749262/1‑141 (MQ=255) gTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCAtttt > 1:677959/1‑141 (MQ=255) tAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACCGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTtttgtttg > 1:970515/1‑141 (MQ=255) aCCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGt < 2:1049663/141‑1 (MQ=255) ttGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTaga < 1:62843/141‑1 (MQ=255) ttGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTaga > 1:1060489/1‑141 (MQ=255) tGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTagag > 1:225962/1‑141 (MQ=255) tttGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAg < 2:504495/141‑1 (MQ=255) tGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTa > 2:406485/1‑141 (MQ=255) gAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTaa > 2:757541/1‑141 (MQ=255) gAGCTACATCTACTGCTGCATCATCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTGTGCGTAGAGTTAGTaa > 2:1077247/1‑141 (MQ=255) aTCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTc < 1:250260/141‑1 (MQ=255) aCTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAAtt < 2:758560/141‑1 (MQ=255) ctgctgCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTTTGTAGAGTCAGTAATATTTTCAAttt > 2:730932/1‑141 (MQ=255) ctgctgCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAAttt < 1:406813/141‑1 (MQ=255) gctgcATTTGCCTCTGCTACTTCTTCATCAGTTGCATTTGAAACTGTAGCATTTTGCGCTTTTCTAGCTGTAGCTGCTTGTCTAACTTCTTTATAAGCATCCATTTTAGTTTGAGTTGAATCCGTAATATTCTCAAttttg > 1:446492/1‑140 (MQ=255) ctgcATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTg > 2:388432/1‑141 (MQ=255) ctgcATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTg > 1:1084292/1‑141 (MQ=255) tgcATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAAttttttt > 2:760149/1‑139 (MQ=255) cAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGAttt < 1:135223/141‑1 (MQ=255) cctCTGCTACTTCTTCATCAGTTGCATTTGAAACTGTAGCATTTTGCGCTTTTCTAGCTGTAGCTGCTTGTCTAACTTCTTTATAAGCATCCATTTTAGTTTGAGTTGAATCCGTAATATTCTCAATTTTGAATATttctt > 1:739379/3‑141 (MQ=255) cTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATttctt < 1:753414/141‑1 (MQ=255) cTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATttctt > 1:409280/1‑141 (MQ=255) ttCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATttcttc < 1:569348/141‑1 (MQ=255) tCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCg < 2:70497/141‑1 (MQ=255) cTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAAc > 2:647134/1‑73 (MQ=255) cTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAAc < 1:647134/73‑1 (MQ=255) tGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGtt < 2:469645/141‑1 (MQ=255) gCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGttt > 2:275805/1‑141 (MQ=255) gCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGttt > 1:997960/1‑141 (MQ=255) gCTACTTCTTCATCAGTTGCATTTGAAACTGTAGCATTTTGCGCTTTTCTAGCTGTAGCTGCTTGTCTAACTTCTTTATAAGCATCCATTTTAGTTTGAGTTGAATCCGTAATATTCTCAATTTTGAATATTTCTTCGttt > 1:827872/1‑141 (MQ=255) aCTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGGATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTa < 2:17138/141‑1 (MQ=255) cttcttCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTTAGATTTCTTCGTTTTTaa > 2:926375/1‑141 (MQ=255) ttcttcATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAAc < 1:463999/141‑1 (MQ=255) tcttcATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAAct > 1:527965/1‑141 (MQ=255) ttcATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAActct < 2:447242/141‑1 (MQ=255) cATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCttt > 2:745310/1‑141 (MQ=255) ttgttgCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTa < 2:258947/141‑1 (MQ=255) ttgCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAAt > 2:880915/1‑141 (MQ=255) gCATTTGAAACTGTAGCATTTTGCGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCt < 2:665119/141‑1 (MQ=255) gCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGGTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCt > 1:784997/1‑141 (MQ=255) tttGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTtgt > 2:846095/1‑141 (MQ=255) tGAAACGGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTAATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAGCTCTTTCTAAATCTTGTGc < 2:1037062/141‑1 (MQ=255) aaCTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGt > 1:539477/1‑141 (MQ=255) aaCTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGt > 1:774031/1‑141 (MQ=255) aCTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGATAGTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTc < 1:1063307/141‑1 (MQ=255) aCTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTc > 1:335300/1‑141 (MQ=255) tGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGt > 2:916814/1‑141 (MQ=255) gTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGtt > 1:34457/1‑141 (MQ=255) gTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGtt > 2:553016/1‑141 (MQ=255) gTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGtt > 1:693063/1‑141 (MQ=255) gTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATGTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGtt > 2:161864/1‑141 (MQ=255) gCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTc > 1:17342/1‑141 (MQ=255) gCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTc < 1:1055275/141‑1 (MQ=255) cATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCg < 1:92420/141‑1 (MQ=255) aTTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCGc < 1:456484/141‑1 (MQ=255) ttttGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCGCt < 2:934120/141‑1 (MQ=255) ttttGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCGCt < 1:761357/141‑1 (MQ=255) tttGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCGCtt < 1:1016131/141‑1 (MQ=255) cttGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCCTTCTAGGCATCCTTCTTTGTTTGCGTGGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGAGCAGTCGTTGTCGCtt > 2:710574/2‑141 (MQ=255) ttGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCGCTTc > 1:200195/1‑141 (MQ=255) ttGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCGCTTc < 2:503112/141‑1 (MQ=255) gAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTTTTTTTTTTCAGTAATATTTTAAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCGCTTCaa > 2:574383/1‑141 (MQ=255) gAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCGCTTCaa > 2:705539/1‑141 (MQ=255) gAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCGCTTCaa > 2:230370/1‑141 (MQ=255) | ACTTTTGATTTTGTATCAGCAACTTCCTGTTTTGATTTAACAACTTGGATGTCATGTAAACCTTGCTTTTGAGCTGCATCTACTGCTGCATCAGCTTCTGCTACTTCTTCATTTGTTGCATTTGAAACTGTAGCATTTTGAGCTTTTCTAGCTGTTGCAGCTTGTTTAACTTCATTATAGGCATCCATTTTTGTTTGCGTAGAGTCAGTAATATTTTCAATTTTTGAGATTTCTTCGTTTTTAACTCTTTCTAAATCTTGTGCAGTCGTTGTCGCTTCAA > CP000730/2283386‑2283665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |