| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 2,421,323 | T→C | 5.5% | D131D (GAT→GAC) | gyaR → | (R)‑2‑hydroxyacid dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 2,421,323 | 0 | T | C | 5.5% | 317.3 / 6.4 | 108 | D131D (GAT→GAC) | gyaR | (R)‑2‑hydroxyacid dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (49/53); new base C (3/3); total (52/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.97e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
CCCGAGAAAAAAGTATAGATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTGGACCTAATC > CP000730/2421184‑2421462 | cccGAGTAAAAAGTATAGATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTgatg < 2:1038772/141‑1 (MQ=255) cGAGAAAAAAGTATAGATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTgatgga > 2:1044129/1‑141 (MQ=255) gagaAAAAAGTATAGATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTgatggat < 2:649412/141‑1 (MQ=255) aaaaaaGTATAGATGTTACAAACACTCCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTgatgtatgtg < 2:446251/141‑3 (MQ=255) aaaaGTATAGATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCa > 2:398951/1‑141 (MQ=255) aaGTATAGATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCAcc > 1:62707/1‑141 (MQ=255) aaGTATAGATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCAcc < 2:597973/141‑1 (MQ=255) tataGATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCTCTTTCAACTAGATTTGATGGATGGGCACCttt < 2:39037/141‑1 (MQ=255) ataGATGTTACAAACACACCTAAAGCATCAACAACTGCGACTGCTGATTTAACAATTGGCTTAACACTTGCAGTAGCACGTCGTATTGTTGAAGAGGACCAATTATCTCGTACAACTGGTTTTGATGGATGGGCACCTTTa < 2:744428/141‑1 (MQ=255) ataGATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTa < 2:908802/141‑1 (MQ=255) taGATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCTCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGACGGATGGGCACCTTTAt < 1:328619/141‑1 (MQ=255) gATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTAttt < 2:692597/141‑1 (MQ=255) tGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTAttttt > 1:362546/1‑141 (MQ=255) ttACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCa < 2:518860/141‑1 (MQ=255) tACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCag < 1:153630/141‑1 (MQ=255) acacCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTaga < 2:40685/141‑1 (MQ=255) acacCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTaga < 2:642306/141‑1 (MQ=255) acacCTAAAGCATCAACAAACGCGACTGCAGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGCACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTaga < 1:195037/141‑1 (MQ=255) acCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAgaga > 1:737484/1‑141 (MQ=255) acCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAgaga < 1:754466/141‑1 (MQ=255) ccTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGaa > 2:563308/1‑141 (MQ=255) cTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCTCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGACGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAg < 1:355104/141‑1 (MQ=255) tAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGt > 2:944292/1‑141 (MQ=255) tAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGt > 1:144077/1‑141 (MQ=255) aaaGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCTCCTTTATTTTTCAGAGGTAGAGAAGTa < 1:570879/141‑1 (MQ=255) gCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCt > 2:214822/1‑141 (MQ=255) aTCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTgg < 2:734308/141‑1 (MQ=255) aTCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTgg > 2:898595/1‑141 (MQ=255) aTCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTgg > 2:10178/1‑141 (MQ=255) tCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTggg < 1:139305/141‑1 (MQ=255) tCAACAAACGCGACTGCTGATGTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTggg < 2:589087/141‑1 (MQ=255) acaaACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGaaa < 1:218362/141‑1 (MQ=255) caaACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGaaaa > 1:645666/1‑141 (MQ=255) cgcgACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAAt > 1:31780/1‑141 (MQ=255) gACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCgg > 1:936147/1‑141 (MQ=255) aCTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGc > 1:983924/1‑141 (MQ=255) ctgctgATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCa < 2:655658/141‑1 (MQ=255) cggctgATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGCATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTAAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCa > 2:301533/3‑141 (MQ=255) gctgATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCAtt > 2:283318/1‑141 (MQ=255) gctgATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCAtt > 2:633195/1‑141 (MQ=255) ctgATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTa < 1:815079/141‑1 (MQ=255) ctgATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTa < 2:239294/141‑1 (MQ=255) aCAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTa > 2:1005048/1‑141 (MQ=255) cAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAg < 1:841979/141‑1 (MQ=255) cAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAg > 2:572194/1‑141 (MQ=255) aaTTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAgg < 1:1006476/141‑1 (MQ=255) aaTTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGGTTAgg > 2:601882/1‑141 (MQ=255) aTTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGt > 2:327898/1‑141 (MQ=255) aTTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACAAATTATCAAGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAggg > 2:768838/1‑140 (MQ=255) ttGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTg < 1:598852/141‑1 (MQ=255) tGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTACCGCGTACAACTGGAGTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCGGGGAAAACAATCGGCATTATCGGTTTAGGTGa < 2:181488/141‑1 (MQ=255) ggATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCTCGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGTGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGaa < 2:926273/141‑1 (MQ=255) ggATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCAACTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGaa > 1:18513/1‑141 (MQ=255) gATTAGTACTTGAAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTATACCTGGCTTTGATGGATGGGCACCTTTATTTATCAGAGGTAGAGAAGTCTCTGGGAACACAATCGGCTTTATCGGTTTGGGTgtga > 2:864352/1‑138 (MQ=255) aTTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAAt > 1:509694/1‑141 (MQ=255) ttAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAAtt > 1:443508/1‑141 (MQ=255) ttAGTACTTGCAGTAGCGCGTCGTATTGATGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAAtt < 2:788190/141‑1 (MQ=255) ggTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCAACTTCATCTTTCAGCGGTAGAGGCGTCTATGGGCAAAAAAACGGAATCATTGGTTTAGGCGAAATTgg > 1:1033227/2‑141 (MQ=255) aGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTgg > 1:1032123/1‑141 (MQ=255) gTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACCGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGt > 1:519545/1‑141 (MQ=255) tACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTa > 2:492424/1‑141 (MQ=255) tACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTa < 1:426492/141‑1 (MQ=255) tttcAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTg < 1:399144/138‑1 (MQ=255) ttGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTg > 1:140177/1‑141 (MQ=255) gCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCa > 2:185301/1‑141 (MQ=255) aGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGt < 1:398951/141‑1 (MQ=255) aGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGt < 1:763795/141‑1 (MQ=255) gTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTa > 2:592171/1‑141 (MQ=255) tAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGAGGGGCACCTTTATTTTTCAGAGGTAGAGAAGTACCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGCAGTGCAGTAg > 1:569305/1‑141 (MQ=255) cgtcgtATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCtcgt < 2:897978/141‑1 (MQ=255) tATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGc < 2:389052/141‑1 (MQ=255) gttgAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAaga < 1:1031639/141‑1 (MQ=255) gttgAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAaga < 1:334607/141‑1 (MQ=255) ttgAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAagag < 1:328259/141‑1 (MQ=255) tgAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGc < 2:749507/141‑1 (MQ=255) aaGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCAt < 2:1032123/141‑1 (MQ=255) aaGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCAt < 1:822319/141‑1 (MQ=255) aaGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGACATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCAt < 1:551238/141‑1 (MQ=255) aGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCAtt > 1:52480/1‑141 (MQ=255) gggACCAATTATCACGTACAACTGGATTTGATGGATGGGTACATTTATTTTTCAGTAGTAGAGAAGTATCTGGGGAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTg < 2:475744/141‑1 (MQ=255) gACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCTGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGAc > 2:41425/1‑141 (MQ=255) aTTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGa < 1:723287/141‑1 (MQ=255) tATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGAtg < 1:751363/141‑1 (MQ=255) aTCACGTACCACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGAtgt > 2:272364/1‑141 (MQ=255) cACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGTCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGc < 1:857011/141‑1 (MQ=255) cACGTACAACTGGATTTGACGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGc > 2:667307/1‑141 (MQ=255) cGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATAGGTTTAGGTGAACTTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCta > 1:644170/1‑141 (MQ=255) gTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCtat < 2:178728/141‑1 (MQ=255) aCAACTGGATTTGATGGATGGGCACCTTTATTTTTTTGTTTTATTGAATTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATTGATGTGCTATac > 2:722763/1‑141 (MQ=255) aCTGGATTTGATGAATGGTCACTTTTATTGTTCATATGTATAAAAGTATCTGGTAAAACATTCGACATTAGCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACt < 1:864352/141‑1 (MQ=255) cTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTg < 2:622942/141‑1 (MQ=255) cTGGATTTGACGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTg < 1:963646/141‑1 (MQ=255) tGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTgg < 2:462215/141‑1 (MQ=255) gATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTGGAc > 2:846221/1‑141 (MQ=255) aTTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTGGAcc > 2:1085544/1‑141 (MQ=255) tGATGGATGGGCACCTTTATTTTTTTTTTTTTTTTAAGTATCTGGGAAACCAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTTGACCTaa > 2:103713/1‑141 (MQ=255) tGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTGGACCTaa > 2:152904/1‑141 (MQ=255) tGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTGGACCTaa > 2:410077/1‑141 (MQ=255) tGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTGGACCTaa > 2:927048/1‑141 (MQ=255) gatagatgCGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTGGACCTAAt < 2:171582/141‑1 (MQ=255) | CCCGAGAAAAAAGTATAGATGTTACAAACACACCTAAAGCATCAACAAACGCGACTGCTGATTTAACAATTGGATTAGTACTTGCAGTAGCGCGTCGTATTGTTGAAGGGGACCAATTATCACGTACAACTGGATTTGATGGATGGGCACCTTTATTTTTCAGAGGTAGAGAAGTATCTGGGAAAACAATCGGCATTATCGGTTTAGGTGAAATTGGTAGTGCAGTAGCTCGTCGTGCAAGAGCATTTGACATGGATGTGCTATACACTGGACCTAATC > CP000730/2421184‑2421462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |