| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP000730 | 2,524,206 | A→C | 7.3% | A142A (GCT→GCG) | nirB ← | nitrite reductase (NAD(P)H) large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP000730 | 2,524,206 | 0 | A | C | 7.3% | 304.2 / 14.4 | 110 | A142A (GCT→GCG) | nirB | nitrite reductase (NAD(P)H) large subunit |
| Reads supporting (aligned to +/- strand): ref base A (44/55); new base C (3/5); total (50/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
GCTTTACGGTCTAGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATAC > CP000730/2524066‑2524342 | gCTTTACGGTCTAGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTa > 1:1004029/1‑141 (MQ=255)gCTTTACGGTCTAGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTa > 2:372988/1‑141 (MQ=255) tACGGTCTAGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTATTCTTatcta > 2:522036/1‑137 (MQ=255) tACGGTCTAGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCaa > 1:464560/1‑141 (MQ=255) aCGGTCTAGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAAt < 1:780641/141‑1 (MQ=255) cGGTCTAGTTGCATTTCCATCAACCATTCATTTATATTTTTTTCTGTTACTTCCATACCTTGATCTAATAAACTACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAAtt > 2:285151/1‑140 (MQ=255) cGGTCTAGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGCTCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTCCTTTTTAGTCTTAGCAAtt > 2:177731/1‑140 (MQ=255) cGGTCTAGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCCCCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATg > 1:1086839/1‑141 (MQ=255) cGGTCTAGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATg > 1:1029194/1‑141 (MQ=255) ggTCTAGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGt < 2:497578/141‑1 (MQ=255) aGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTtcatc < 1:217640/141‑1 (MQ=255) aGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTtcatc < 2:792233/141‑1 (MQ=255) ttGCATTTCCATCAACCATTCAGCTAGATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTcatcat < 2:901467/141‑1 (MQ=255) gCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACTCTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCAttt > 2:790802/1‑141 (MQ=255) gCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACTCTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCAttt > 2:324758/1‑141 (MQ=255) cATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTg > 1:3991/1‑141 (MQ=255) ccATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAg > 2:1001151/1‑141 (MQ=255) tCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTat < 2:385392/141‑1 (MQ=255) aCCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTatcat < 2:894440/141‑1 (MQ=255) cATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTAtcatca < 2:807020/141‑1 (MQ=255) cATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTAtcatca > 1:933048/1‑141 (MQ=255) aaTTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTAtcatca < 2:189795/140‑1 (MQ=255) tCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGc < 1:334143/141‑1 (MQ=255) tCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGc > 1:745176/1‑141 (MQ=255) aGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGt < 1:736233/141‑1 (MQ=255) aGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTACaaaaaaaacaaacag < 2:865927/141‑15 (MQ=255) aaaTGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTtctc < 2:551890/141‑1 (MQ=255) aaTGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTtctct < 1:1031774/141‑2 (MQ=255) aaTGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTcc > 1:122559/1‑141 (MQ=255) tGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaa < 1:896550/141‑1 (MQ=255) tGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaa < 1:800323/141‑1 (MQ=255) tGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaa < 2:115175/141‑1 (MQ=255) gTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaac < 1:776552/141‑1 (MQ=255) tAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaacc < 1:965990/141‑1 (MQ=255) tAACACCGTTACTCCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaacc < 1:69242/141‑1 (MQ=255) acacCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTccaaccaa < 1:664269/141‑1 (MQ=255) cacCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAAt < 2:75631/141‑1 (MQ=255) acCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTTCAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAAtt < 1:537405/141‑1 (MQ=255) ccGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTa > 1:966819/1‑141 (MQ=255) cATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTaa > 2:378237/1‑141 (MQ=255) tACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATg < 1:595811/141‑1 (MQ=255) cTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTTTTTTTTGTATTGTTCATCATTTGTTCACTATCATCATGCGTTCTCCAACCAATTACACTCGGTAATTTCg > 2:436773/1‑141 (MQ=255) tGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGaa < 1:196407/141‑1 (MQ=255) tCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACct > 1:39708/1‑141 (MQ=255) cTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctg > 1:306535/1‑141 (MQ=255) ataaACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCCTTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaa > 1:514430/1‑141 (MQ=255) ataaACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaa > 2:993513/1‑141 (MQ=255) ataaACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaa > 2:772692/1‑141 (MQ=255) taaACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaac > 1:435663/1‑141 (MQ=255) taaACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaac < 1:598135/141‑1 (MQ=255) ccACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaactgga > 2:592145/1‑141 (MQ=255) ccACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACctggaactgga > 1:135762/1‑141 (MQ=255) aCGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAAt > 1:192197/1‑141 (MQ=255) aCGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAAt > 1:244282/1‑141 (MQ=255) cGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATg > 2:153260/1‑141 (MQ=255) cGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATg > 1:660154/1‑141 (MQ=255) acacTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGaa < 1:371296/141‑1 (MQ=255) cacTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAAt > 2:1075945/1‑141 (MQ=255) cctctAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATg < 1:341136/140‑1 (MQ=255) acTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATg < 2:1070050/141‑1 (MQ=255) acTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATg < 2:723776/141‑1 (MQ=255) acTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATg < 1:656416/141‑1 (MQ=255) ctAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCtt > 2:334725/1‑141 (MQ=255) ctAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCtt > 2:334694/1‑141 (MQ=255) tAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCttt < 1:613619/141‑1 (MQ=255) aaaCCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTa > 2:734348/1‑141 (MQ=255) aaaCCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTa < 2:39708/141‑1 (MQ=255) aaaCCTAGTAAGCCTCCACCAATTACAATTGCTTTCTTTTTATTCTTCGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTa < 1:10851/141‑1 (MQ=255) aCCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTTGTTTTTTCATTGTTCATCATTTGTTCAGTATCATCAAGGGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGCACGCGCATGACGAATGCTTTAGa > 2:380577/1‑141 (MQ=255) aCCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTTGAACCTGGAACTGGAATGACTAATGCTTTAGa > 2:758948/1‑141 (MQ=255) cTAGTAATTGTCCGCCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAGCCAATTACGCGCTGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAAc < 2:40150/141‑1 (MQ=255) cTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAAc < 2:915917/141‑1 (MQ=255) cTAGTAAGCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTCGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAAc > 2:714685/1‑141 (MQ=255) tAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGATTGCTTTaaaaaaaaa < 2:680110/141‑6 (MQ=255) tcctccACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCCAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGc < 2:932731/141‑1 (MQ=255) accaATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAAt < 2:969931/141‑1 (MQ=255) aTTACAATTGCTTTCTTTTTAGTCTTCGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAAt > 2:536682/1‑141 (MQ=255) aTTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAAt > 1:766419/1‑141 (MQ=255) tACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAAttt > 1:256316/1‑141 (MQ=255) aaTTGCTTTCTTTTTAGTCTTCGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATc < 1:637284/141‑1 (MQ=255) aTTGCTTTCTTTTTAGTTTTAGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCg > 2:876844/1‑141 (MQ=255) ttGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGt < 2:821376/141‑1 (MQ=255) gCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTAt < 1:57376/141‑1 (MQ=255) gCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGAAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTAt < 2:941862/141‑1 (MQ=255) ctttctttTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATg > 1:1015153/1‑141 (MQ=255) ctttctttTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATg > 1:420222/1‑141 (MQ=255) tttctttTTAGTCTTCGCAATGTTCATCATTTGTTCAGTATCATCAATCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGa < 2:93644/141‑1 (MQ=255) ctttTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATAc < 1:553186/141‑1 (MQ=255) ctttTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATAc > 2:576484/1‑141 (MQ=255) ttttAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACtt > 2:351785/1‑141 (MQ=255) tttAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAAAAAAAAAAAAAAAAATCAATTTATCGTATGATACTTc < 2:1048522/141‑1 (MQ=255) ttAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAAAAAAAAAAAAAAATCAATTTATCGTATGATACTTCa < 2:664617/141‑1 (MQ=255) attCTTTGTAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAAt > 2:104047/3‑141 (MQ=255) aGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAAt > 2:128396/1‑141 (MQ=255) gTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATa > 1:556818/1‑141 (MQ=255) gTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATa > 1:397855/1‑141 (MQ=255) gTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATa < 2:435663/141‑1 (MQ=255) tCTTCGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCCGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAAAAAAAAAAAAAAAAATCAATTTATCGTATGATACTTCAATAc < 2:541588/141‑1 (MQ=255) tCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATAc < 1:486103/141‑1 (MQ=255) tCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACATGTCGCAAAAATCAATTTATCGTATGATACTTCAATAc < 2:965099/141‑1 (MQ=255) | GCTTTACGGTCTAGTTGCATTTCCATCAACCATTCAGCTAAATGTAACACCGTTACTTCCATACCTTGATCTAATAAACCACGTGCACACTCTAAACCTAGTAATCCTCCACCAATTACAATTGCTTTCTTTTTAGTCTTAGCAATGTTCATCATTTGTTCAGTATCATCAAGCGTTCTCCAACCAATTACACTCGGTAATGTCGAACCTGGAACTGGAATGACGAATGCTTTAGAACCTGTCGCAAAAATCAATTTATCGTATGATACTTCAATAC > CP000730/2524066‑2524342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |