BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	2,614,089	A→G	5.2%	N194N (AAT→AAC)	USA300HOU_2478 ←	lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	2,614,089	0	A	G	5.2%	290.6 / 4.8	96	N194N (AAT→AAC)	USA300HOU_2478	lipoprotein
Reads supporting (aligned to +/- strand): ref base A (52/39); new base G (2/3); total (54/42)
Fisher's exact test for biased strand distribution p-value = 6.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.33e-01

Only 100 of 102 total aligned reads displayed.

TTTTCTATAAATGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGATTTCTTTTCTTAATTT  >  CP000730/2613949‑2614226

ttttCTATAAATGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGtcatca                                                                                                                                           <  1:281309/141‑1 (MQ=255)

   tCTATAAATGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTa                                                                                                                                        <  1:356980/141‑1 (MQ=255)

   tCTATAAATGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTa                                                                                                                                        <  1:360815/141‑1 (MQ=255)

   tCTATAAATGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTa                                                                                                                                        <  2:835836/141‑1 (MQ=255)

     tataAATGTAAACTCTACATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACt                                                                                                                                      >  1:356916/1‑141 (MQ=255)

     tataAATGTAAACTCTAAATTTTTGTGTCCTATAGTTGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTATGTTGCTTCACTTTTTAGTCTTCATTTCt                                                                                                                                      >  2:1029231/1‑141 (MQ=255)

     tataAATGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACt                                                                                                                                      >  2:483799/1‑141 (MQ=255)

     tataAATGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACt                                                                                                                                      >  1:351777/1‑141 (MQ=255)

     tataAATGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACt                                                                                                                                      <  1:348324/141‑1 (MQ=255)

        aaaTGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTaa                                                                                                                                   >  1:92546/1‑141 (MQ=255)

        aaaTGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTAGTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCGCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTaa                                                                                                                                   >  1:648860/1‑141 (MQ=255)

         aaTGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATTATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAAt                                                                                                                                  >  1:860307/1‑141 (MQ=255)

         aaTGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAAt                                                                                                                                  >  1:152067/1‑141 (MQ=255)

         aaTGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAAt                                                                                                                                  >  1:298357/1‑141 (MQ=255)

         aaTGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTGCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAAt                                                                                                                                  >  1:860585/1‑141 (MQ=255)

            gTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCCTCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGa                                                                                                                               <  2:914447/141‑1 (MQ=255)

                aCTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACt                                                                                                                           <  2:610952/141‑1 (MQ=255)

                    tagattttttgacccTACAGATGAGCCGTTTAAATCACCATCACCTTTTATTAATAATTTCGGAGCTTTGTTGGTTGGAATATTATATCTTTTTCGAAGTTGCTTCACATTGTAGTCATCGTTTTTCAATTGATATTTTGc                                                                                                                       <  2:901543/128‑1 (MQ=255)

                    tAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGc                                                                                                                       <  2:64079/141‑1 (MQ=255)

                     aaaTTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCt                                                                                                                      <  2:872945/141‑1 (MQ=255)

                     aaaTTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCt                                                                                                                      <  1:974359/141‑1 (MQ=255)

                           ttGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATaa                                                                                                                >  2:911426/1‑141 (MQ=255)

                            tgtgTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAAc                                                                                                               <  1:709886/141‑1 (MQ=255)

                                tCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTgg                                                                                                           <  2:968325/141‑1 (MQ=255)

                                       gatgatCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTc                                                                                                    <  1:843430/141‑1 (MQ=255)

                                         tgatCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCgg                                                                                                  >  1:969398/1‑141 (MQ=255)

                                         tgatCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCgg                                                                                                  >  1:969394/1‑141 (MQ=255)

                                         tgatCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCgg                                                                                                  >  2:1018226/1‑141 (MQ=255)

                                            tCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGAtt                                                                                               >  1:414551/1‑141 (MQ=255)

                                            tCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGAtt                                                                                               >  2:719570/1‑141 (MQ=255)

                                             ccTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATta                                                                                              >  2:23878/1‑141 (MQ=255)

                                                tttAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTatat                                                                                           >  1:1082763/1‑141 (MQ=255)

                                                 ttAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATg                                                                                          >  1:534818/1‑141 (MQ=255)

                                                  tAAATCACCATCGCCTTTTATTAATAATTTATGTGCTTTCTTAGTTTGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGa                                                                                         <  2:1050642/141‑1 (MQ=255)

                                                     aTCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAAt                                                                                      >  2:416811/1‑141 (MQ=255)

                                                      tCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATg                                                                                     >  2:199428/1‑141 (MQ=255)

                                                        aCCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGTACATTCGGATTATATGAAATGTc                                                                                   >  1:54353/1‑141 (MQ=255)

                                                         ccATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCa                                                                                  >  1:720590/1‑141 (MQ=255)

                                                            tCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCa                                                                               >  2:329677/1‑141 (MQ=255)

                                                            tCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCa                                                                               <  1:394550/141‑1 (MQ=255)

                                                              gCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATc                                                                             <  2:1035806/141‑1 (MQ=255)

                                                               ccTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCt                                                                            >  1:1017792/1‑141 (MQ=255)

                                                                cTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCtt                                                                           <  1:1023358/141‑1 (MQ=255)

                                                                 ttttATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCttt                                                                          <  1:567498/141‑1 (MQ=255)

                                                                     attaATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATaa                                                                      >  2:334074/1‑141 (MQ=255)

                                                                        aataatTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCa                                                                   <  2:351777/141‑1 (MQ=255)

                                                                        aataatTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCa                                                                   <  1:418361/141‑1 (MQ=255)

                                                                        aataatTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCa                                                                   <  2:846648/141‑1 (MQ=255)

                                                                         ataatTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCAt                                                                  <  2:862139/141‑1 (MQ=255)

                                                                           aatTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTa                                                                <  1:479228/141‑1 (MQ=255)

                                                                            atTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTaa                                                               >  2:244782/1‑141 (MQ=255)

                                                                              ttAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAata                                                             >  1:95091/1‑141 (MQ=255)

                                                                              ttAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAata                                                             >  1:136658/1‑141 (MQ=255)

                                                                                 ggTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCt                                                          >  2:854498/1‑141 (MQ=255)

                                                                                  gTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCtt                                                         >  2:1043921/1‑141 (MQ=255)

                                                                                  gTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCtt                                                         >  1:306952/1‑141 (MQ=255)

                                                                                   agCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATTGTTACTCAATTGATATTTTGCGGAATAACTTGGAACATTAGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCttt                                                        <  2:402280/140‑1 (MQ=21)

                                                                                     cTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTaa                                                      <  2:376506/141‑1 (MQ=255)

                                                                                        tCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTaaatt                                                   <  1:603127/141‑3 (MQ=255)

                                                                                          ttAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCa                                                 <  2:725275/141‑1 (MQ=255)

                                                                                           tAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCAc                                                >  1:124029/1‑141 (MQ=255)

                                                                                            aGTTGGTATATTATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCAcc                                               >  1:1050600/1‑141 (MQ=255)

                                                                                               tGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTa                                            >  2:60576/1‑141 (MQ=255)

                                                                                                  tataTCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTg                                         <  1:592453/141‑1 (MQ=255)

                                                                                                   atattatatctttttCGAAGTTGNTTCACATTGTAATCATCGTTTTTCAATTGATATTTTGCGGAATAACTTGGAACAANAGTATTANATGAAATGNCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGt                                        >  1:565595/13‑141 (MQ=9)

                                                                                                   atatCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGt                                        <  1:105602/141‑1 (MQ=255)

                                                                                                   atatCATACCTCTTTCTAAGTTGCTTCACAGTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGt                                        >  2:975288/1‑141 (MQ=255)

                                                                                                      tCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACa                                     >  1:159155/1‑141 (MQ=255)

                                                                                                      tCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACa                                     >  2:948541/1‑141 (MQ=255)

                                                                                                      tCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACa                                     >  2:66626/1‑141 (MQ=255)

                                                                                                        aTACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACaaa                                   <  2:1030856/141‑1 (MQ=255)

                                                                                                        aTACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACaaa                                   <  1:137892/141‑1 (MQ=255)

                                                                                                            ctctTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAAt                               >  2:443322/1‑141 (MQ=255)

                                                                                                            atctTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAAt                               >  1:1029689/2‑141 (MQ=255)

                                                                                                                ttCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATCATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTaa                           <  1:520836/141‑1 (MQ=255)

                                                                                                                ttCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTaa                           <  2:24184/141‑1 (MQ=255)

                                                                                                                ttCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTaa                           >  1:518574/1‑141 (MQ=255)

                                                                                                                 tCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTaaa                          >  2:33927/1‑141 (MQ=255)

                                                                                                                  cTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAg                         >  1:147351/1‑141 (MQ=255)

                                                                                                                     aGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGttt                      >  1:796993/1‑141 (MQ=255)

                                                                                                                     aGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGttt                      <  2:206335/141‑1 (MQ=255)

                                                                                                                        tGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCg                   <  2:2320/141‑1 (MQ=255)

                                                                                                                         gCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGa                  <  1:296031/141‑1 (MQ=255)

                                                                                                                            tCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGAttt               >  1:95081/1‑141 (MQ=255)

                                                                                                                            tCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGAttt               >  2:822990/1‑141 (MQ=255)

                                                                                                                              acaTTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGAtttct             >  2:343694/1‑141 (MQ=255)

                                                                                                                                aTTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGAtttcttt           >  2:462576/1‑141 (MQ=255)

                                                                                                                                aTTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGAtttcttt           <  1:909243/141‑1 (MQ=255)

                                                                                                                                  tGTAGTCATTGTTACTCAATTGATATTTTGCGGAATAACTTGGAACATTAGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAAAACTTAAAGTCTTCAAtttcttttc         <  1:614534/141‑1 (MQ=11)

                                                                                                                                   gTAGTCATCATTACTTTATTGCTACTGTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCTCCGTATTGTACAAAGAATTTAAAGTTTTCGAtttcttttct        <  2:860307/141‑1 (MQ=255)

                                                                                                                                   gTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGAtttcttttct        >  2:602475/1‑141 (MQ=255)

                                                                                                                                   gTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGAtttcttttct        <  2:492826/141‑1 (MQ=255)

                                                                                                                                   gTAGTCATCATTACTTAATTGATACTATGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGAtttcttttct        <  2:860585/141‑1 (MQ=255)

                                                                                                                                    tAGTCATTGTTACTCAATTGATATTTTGCGGAATAACTTGGAACATTAGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAAAACTTAAAGTCTTCAATttcttttctt       >  1:350718/1‑141 (MQ=11)

                                                                                                                                      gTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGATTTCTTTTCTTaa     <  1:522233/141‑1 (MQ=255)

                                                                                                                                        catcatTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGATTTCTTTTCTTAAtt   <  1:911426/141‑1 (MQ=255)

                                                                                                                                        catcatTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGATTTCTTTTCTTAAtt   >  2:1035091/1‑141 (MQ=255)

                                                                                                                                        catcatTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGATTTCTTTTCTTAAtt   >  1:409970/1‑141 (MQ=255)

                                                                                                                                         atcatTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGATTTCTTTTCTTAAttt  >  1:890444/1‑141 (MQ=255)

                                                                                                                                         atcatTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGATTTCTTTTCTTAAttt  >  2:683757/1‑141 (MQ=255)

TTTTCTATAAATGTAAACTCTAAATTTTTGTGTCCTATAGATGATCCTTTTAAATCACCATCGCCTTTTATTAATAATTTAGGTGCTTTCTTAGTTGGTATATCATACCTCTTTCTAAGTTGCTTCACATTGTAGTCATCATTACTTAATTGATACTTTGCTGAATAACTTGGCACATTCGGATTATATGAAATGTCACCATCTTTATAATCATTAATATCTTTAAAGTCACCGTATTGTACAAAGAATTTAAAGTTTTCGATTTCTTTTCTTAATTT  >  CP000730/2613949‑2614226

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`