BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	239,946	A→G	6.3%	H256R (CAT→CGT)	rlp →	RGD domain lipoprotein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	239,946	0	A	G	6.3%	361.7 / 11.4	127	H256R (CAT→CGT)	rlp	RGD domain lipoprotein
Reads supporting (aligned to +/- strand): ref base A (54/63); new base G (4/4); total (59/68)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.07e-01

Only 100 of 128 total aligned reads displayed.

CAACAAGATGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGTTTTCTTTAGATA  >  CP000730/239807‑240086

caacaaGATGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCAt                                                                                                                                             >  2:71115/1‑141 (MQ=255)

caacaaGATGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCAt                                                                                                                                             <  1:763553/141‑1 (MQ=255)

 aacaaGATGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGACATg                                                                                                                                            >  2:297696/1‑141 (MQ=255)

  acaaGATGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGa                                                                                                                                           <  1:661088/141‑1 (MQ=255)

    aaGATGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGAtt                                                                                                                                         <  1:61854/141‑1 (MQ=255)

    aaGATGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGAtt                                                                                                                                         <  1:737403/141‑1 (MQ=255)

     aGATGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTa                                                                                                                                        >  2:1064139/1‑141 (MQ=255)

      gATGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCACTTAACAACGAAAGGTTCGTTAAGTCGTGATTAt                                                                                                                                       <  1:828095/141‑1 (MQ=255)

        tGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGc                                                                                                                                     <  1:1011424/141‑1 (MQ=255)

        tGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGc                                                                                                                                     <  2:552661/141‑1 (MQ=255)

          gTGAAATTCCTACATTGGATCCAATACGATAAATTGAGACGTAAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGATAAGTCCAGATTCTGAtg                                                                                                                                   >  2:373098/1‑141 (MQ=255)

            gAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCtgtg                                                                                                                                 <  2:175366/141‑1 (MQ=255)

                ttCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATa                                                                                                                             <  1:489119/141‑1 (MQ=255)

                  ccTACATTGTATCCAATACGTTAAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAg                                                                                                                           <  2:994539/141‑1 (MQ=255)

                     aCATTGGATCCCATACGTTCAATTCCGCCGTCAGTATATTCA‑ATTCATATGAATATGTACACAAGGTTATTATTATTAGATGAAAACGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGAc                                                                                                                        <  2:312734/141‑1 (MQ=255)

                       aTTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACaa                                                                                                                      <  2:561195/141‑1 (MQ=255)

                        ttGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGGTCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAAt                                                                                                                     >  2:874178/1‑141 (MQ=255)

                        ttGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAAt                                                                                                                     <  2:219477/141‑1 (MQ=255)

                         tGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATa                                                                                                                    <  2:837829/141‑1 (MQ=255)

                             tCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGc                                                                                                                >  2:1085830/1‑141 (MQ=255)

                             tCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGc                                                                                                                <  2:33197/141‑1 (MQ=255)

                             tCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTAGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGc                                                                                                                <  2:1049359/141‑1 (MQ=255)

                             tCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCACTTAACAACGAAAGGTTCGTTAAGTCGTGATTATGCTGTGAATAAGGACAATAAAGc                                                                                                                >  1:446576/1‑141 (MQ=255)

                             tCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCACTTAACAACGAAAGGTTCGTTAAGTCGTGATTATGCTGTGAATAAGGACAATAAAGc                                                                                                                >  1:56910/1‑141 (MQ=255)

                              ccAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCACTTAACAACGAAAGGTTCGTTAAGTCGTGATTATGCTGTGAATAAGGACAATAAAGCa                                                                                                               <  2:363180/141‑1 (MQ=255)

                                aaTACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCAtt                                                                                                             <  1:606163/141‑1 (MQ=255)

                                aaTACGTTAAATTGCGCCGTAAGTATATTAA‑ATTAATATGAATATGTACACCAGGTTATTATTATTAGATGAAAATGATCATTTCAAAACGCCAGGTTAGTACAGTCCTGATTATGCTGTGACTACGGACAATACAGCAtt                                                                                                             <  2:542251/141‑1 (MQ=255)

                                 aTACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCAttt                                                                                                            <  1:383435/141‑1 (MQ=255)

                                 aTACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCAttt                                                                                                            >  2:936824/1‑141 (MQ=255)

                                 aTACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTAATGATTATGCTGTGAATAAGGAAAATAAAGCAttt                                                                                                            >  2:666602/1‑141 (MQ=255)

                                      ttCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTAttt                                                                                                       <  1:1061877/141‑1 (MQ=255)

                                       tCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTc                                                                                                      >  1:765196/1‑141 (MQ=255)

                                       tCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTc                                                                                                      <  1:625602/141‑1 (MQ=255)

                                       tCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTc                                                                                                      <  1:107736/141‑1 (MQ=255)

                                        cAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCt                                                                                                     >  1:1076445/1‑141 (MQ=255)

                                         aaTTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCtt                                                                                                    >  2:945212/1‑141 (MQ=255)

                                          aTTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTg                                                                                                   <  1:970903/141‑1 (MQ=255)

                                             gcgcCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTa                                                                                                <  1:650457/141‑1 (MQ=255)

                                                 cGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAagag                                                                                            <  1:734180/141‑1 (MQ=255)

                                                  gTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAgaga                                                                                           <  2:675664/141‑1 (MQ=255)

                                                  gTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAgaga                                                                                           >  2:634054/1‑141 (MQ=255)

                                                      gTATACTCA‑ATTAATATGAATATGTACCCAGTGGTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACGATAAAGCATTTTATTTCTTGTTAAGAgatgat                                                                                       <  2:646509/141‑1 (MQ=255)

                                                        atatTCATATTAAT‑TGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAgatgatga                                                                                     >  2:194676/1‑141 (MQ=255)

                                                           ttCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGatta                                                                                  >  2:975333/1‑141 (MQ=255)

                                                            tCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGattat                                                                                 <  1:656690/141‑1 (MQ=255)

                                                            tCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGattat                                                                                 >  2:560026/1‑141 (MQ=255)

                                                             cA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGattatt                                                                                <  1:625500/141‑1 (MQ=255)

                                                              a‑aTTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTAttt                                                                               >  2:573270/1‑141 (MQ=255)

                                                              a‑aTTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTAttt                                                                               >  2:573557/1‑141 (MQ=255)

                                                                aTTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTAtttt                                                                              <  2:954654/141‑1 (MQ=255)

                                                                    atatgaatatgTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGa                                                                          >  2:1082625/1‑141 (MQ=255)

                                                                      atgaatatgTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGaaa                                                                        <  1:912683/141‑1 (MQ=255)

                                                                       tgaatatgTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAg                                                                       >  1:150057/1‑141 (MQ=255)

                                                                       tgaatatgTACACAAGGTTATTATTATTAGATGAAAATGATCACTTAACAACGAAAGGTTCGTTAAGTCGTGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAg                                                                       >  1:423404/1‑141 (MQ=255)

                                                                         aatatgTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTg                                                                     >  2:187269/1‑141 (MQ=255)

                                                                                acacAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATg                                                              >  2:1072998/1‑141 (MQ=255)

                                                                                 cacaAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATgg                                                             >  1:220322/1‑141 (MQ=255)

                                                                                     aGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAATTTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACaa                                                         <  1:431682/141‑1 (MQ=255)

                                                                                      tgTTATTATTATTTAATTAAAATTAGTAGTTAACAACTTAATTCTCTTTAATTGATTATGATGCTTTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAg                                                        <  1:373098/140‑1 (MQ=255)

                                                                                      ggTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTAGGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAg                                                        >  1:107026/1‑141 (MQ=255)

                                                                                         tattattattaGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCAc                                                     >  2:987646/1‑141 (MQ=255)

                                                                                          attattattaGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTGAATGGAGAAGCACg                                                    >  2:539452/1‑141 (MQ=255)

                                                                                           ttattattaGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGt                                                   <  1:157392/141‑1 (MQ=255)

                                                                                             attattaGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTaa                                                 >  1:124730/1‑141 (MQ=255)

                                                                                              ttattaGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAAt                                                >  2:30126/1‑141 (MQ=255)

                                                                                               tattaGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATa                                               <  2:468934/141‑1 (MQ=255)

                                                                                                 ttaGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTCTGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACt                                             <  2:958026/141‑1 (MQ=255)

                                                                                                 ttaGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACt                                             <  1:951407/141‑1 (MQ=255)

                                                                                                 ttaGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACt                                             >  2:666206/1‑141 (MQ=255)

                                                                                                      tGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGgaga                                        >  1:481470/1‑141 (MQ=255)

                                                                                                       gAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGagag                                       >  1:162331/1‑141 (MQ=255)

                                                                                                         aaaTGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTGGTTAAGAGATGATTATTATTTTTCGGAAGTGGTCAATGGACAAGCACGTAATACCGGAGAGCg                                     >  1:317737/1‑141 (MQ=255)

                                                                                                             gATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTa                                 <  2:60696/141‑1 (MQ=255)

                                                                                                                cATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCg                              >  1:889969/1‑141 (MQ=255)

                                                                                                                cATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCg                              >  2:487025/1‑141 (MQ=255)

                                                                                                                 aTTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCgg                             <  1:484403/141‑1 (MQ=255)

                                                                                                                     aacaacGAAAGGTTCGTTAAGTCATGATTATACTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGa                         <  2:460620/141‑1 (MQ=255)

                                                                                                                        aacGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGa                      >  2:112738/1‑141 (MQ=255)

                                                                                                                          cGAAAGGTTCGTTAAGTCGTGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATg                    <  1:1011560/141‑1 (MQ=255)

                                                                                                                          cGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATg                    >  1:332919/1‑141 (MQ=255)

                                                                                                                          cGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATg                    >  1:350728/1‑141 (MQ=255)

                                                                                                                           gAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGt                   >  1:97509/1‑141 (MQ=255)

                                                                                                                           gAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGt                   >  1:405218/1‑141 (MQ=255)

                                                                                                                           gAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGt                   <  2:365653/141‑1 (MQ=255)

                                                                                                                            aaaGGTTCGTTCAGTCATGAATACGCTGTGAATAACGACAATAAAGCATTTGATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGtt                  <  1:1024727/141‑1 (MQ=255)

                                                                                                                              aGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTaa                <  2:314627/141‑1 (MQ=255)

                                                                                                                              aGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTaa                <  1:770605/141‑1 (MQ=255)

                                                                                                                               ggTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAg               >  1:903640/1‑141 (MQ=255)

                                                                                                                               ggTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAg               <  1:219280/141‑1 (MQ=255)

                                                                                                                                gTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGt              <  1:1043269/141‑1 (MQ=255)

                                                                                                                                 ttCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGtt             >  2:397991/1‑141 (MQ=255)

                                                                                                                                 ttCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGtt             >  1:126426/1‑141 (MQ=255)

                                                                                                                                  tCGTTAAGTCGTGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGttt            >  2:890870/1‑141 (MQ=255)

                                                                                                                                    gTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGAtaaatagagaaa          >  1:561812/1‑130 (MQ=255)

                                                                                                                                     ttAAGTCGTGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGTTTTCt         <  2:423404/141‑1 (MQ=255)

                                                                                                                                     ttAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGTTTTCt         <  1:782925/141‑1 (MQ=255)

                                                                                                                                      tAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGTTTTCtt        <  2:383967/141‑1 (MQ=255)

                                                                                                                                          tCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGTTTTCTTtaga    <  2:1002358/141‑1 (MQ=255)

                                                                                                                                           cATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGTTTTCTTtagat   >  2:418354/1‑141 (MQ=255)

                                                                                                                                           cATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGTTTTCTTtagat   <  2:1070123/141‑1 (MQ=255)

CAACAAGATGGTGAAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCA‑ATTAATATGAATATGTACACAAGGTTATTATTATTAGATGAAAATGATCATTTAACAACGAAAGGTTCGTTAAGTCATGATTATGCTGTGAATAAGGACAATAAAGCATTTTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGGCTGAAGATGTTAAGTTTTCTTTAGATA  >  CP000730/239807‑240086

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`