New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	38900 =	35 (0.950)	3 (0.090)	3/244	NT	8.6%	coding (248/429 nt)	maoC	possible acyl dehydratase MaoC
	?	CP000730	38952 =	31 (0.890)					coding (300/429 nt)	maoC	possible acyl dehydratase MaoC

GCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGAAATCCATAAAAAAAGAAAATGGACTCGTTACAGTGTCACTTTCAACATACAATGAAAATGAAGAAAT  >  CP000730/38760‑39038                                                                                                                                             |                                                                                                                                           gCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGaa                                                                                                                                            >  1:319031/1‑141 (MQ=255)      taGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACg                                                                                                                                       <  1:298207/141‑1 (MQ=255)      taGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACg                                                                                                                                       <  2:22637/141‑1 (MQ=255)       aGATAAAGAACAAGCACAATAGAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGt                                                                                                                                      <  1:367608/141‑1 (MQ=255)         aTAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTa                                                                                                                                    >  2:146262/1‑141 (MQ=255)            aaGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAAt                                                                                                                                 <  2:116270/141‑1 (MQ=255)            aaGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAAt                                                                                                                                 <  1:145114/141‑1 (MQ=255)            aaGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAAt                                                                                                                                 <  1:257569/141‑1 (MQ=255)                 aatgCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATttatt                                                                                                                            <  2:393318/138‑1 (MQ=255)                    gCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTaaa                                                                                                                         >  2:407660/1‑141 (MQ=255)                     cAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAAc                                                                                                                        >  1:195960/1‑141 (MQ=255)                      aGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGTATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAAcc                                                                                                                       <  2:402010/141‑1 (MQ=255)                        aaCAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTg                                                                                                                     <  1:436507/141‑1 (MQ=255)                          cAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGta                                                                                                                   >  2:238331/1‑141 (MQ=255)                             aGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATAc                                                                                                                >  1:370669/1‑141 (MQ=255)                                   tttAAAGGTATCATTGCATCTGGCATGGATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGt                                                                                                          >  2:360620/1‑141 (MQ=255)                                     tAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTaa                                                                                                        <  2:241502/141‑1 (MQ=255)                                      aaaGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAAt                                                                                                       <  2:238858/141‑1 (MQ=255)                                              taaatacaatttcttcattttcattgtatgttgaaagtgacactgtaacgagtccattttctttttttatggatttcttatttgtaatttcagcgATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTa                                                                                               >  2:217296‑M1/96‑141 (MQ=255)                                                aatacaatttcttcattttcattgtatgttgaaagtgacactgtaacgagtccattttctttttttatggatttcttatttgtaatttcagcgATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACg                                                                                             >  2:263992‑M1/94‑141 (MQ=255)                                                 atacaatttcttcattttcattgtatgttgaaagtgacactgtaacgagtccattttctttttttatggatttcttatttgtaatttcagcgATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGt                                                                                            >  2:283165‑M1/93‑141 (MQ=255)                                                         gcatgcatACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTg                                                                                    <  2:275199/141‑1 (MQ=255)                                                             gcatACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAAt                                                                                <  1:304230/141‑1 (MQ=255)                                                              catACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAAtt                                                                               <  2:319031/141‑1 (MQ=255)                                                                tACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTAc                                                                             <  2:284449/141‑1 (MQ=255)                                                                 acacTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACa                                                                            <  1:117948/141‑1 (MQ=255)                                                                       tCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAg                                                                      >  2:255324/1‑141 (MQ=255)                                                                        cAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGa                                                                     >  1:181147/1‑141 (MQ=255)                                                                        cAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGa                                                                     >  2:207541/1‑141 (MQ=255)                                                                            atCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGaaaaa                                                                 <  2:117823/141‑3 (MQ=255)                                                                                    aaTTATGGGTAGAAGAAGGTAAATACGGAGGAGAAGTTGTAGCAGGAACACAAATGAATAACGATAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGAAAACCATaaaaa                                                         >  2:146204/1‑141 (MQ=255)                                                                                           ggTAGAACAAAGTAAATACGGAGAAGAAATTAAAGCAGAAACACAAATGAATAACGTTAAATATATTAAACCTGTATACCCAGATAACAAATAGTACGTTATCGCTGCATTTACAAATTAAAAAAAAAAAAAAAAAGaaaa                                                  <  2:137323/141‑1 (MQ=255)                                                                                                  gaagGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGAAATCCATAAAAAAAGAAAATGGACTc                                           >  2:194985/1‑141 (MQ=255)                                                                                                        aaaTACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGAAATCCATAAAAAAAGAAAATGGACTCGTTACa                                     >  1:218059/1‑141 (MQ=255)                                                                                                             cGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGAAATCCATAAAAAAAGAAAATGGAcactgtaacgagtc                                <  1:156143/141‑14 (MQ=255)                                                                                                                                 gAACACAAATGAATAACGTTAACTTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGAAATCCATAAAAAAAGAAAATGGACTCGTTACAGTGTCACTTTCAACATACaatgaaa            <  1:202876/141‑1 (MQ=255)                                                                                                                                     acaAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGAAATCCATAAAAAAAGAAAATGGACTCGTTACAGTGTCACTTTCAACATACaatgaaaatga        <  1:181968/141‑1 (MQ=255)                                                                                                                                      caAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGAAATCCATAAAAAAAGAAAATGGACTCGTTACAGTGTCACTTTCAACATACaatgaaaatgaa       <  1:450934/141‑1 (MQ=255)                                                                                                                                       aaaTGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGAAATCCATAAAAAAAGAAAATGGACTCGTTACAGTGTAACTTTCAACATACAATGAAAATgaag      >  1:193421/1‑141 (MQ=255)                                                                                                                                          tGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGAAATCCATAAAAAAAGAAAATGGACTCGTTACAGTGTCACTTTCAACATACAATGAAAATGAAGaaa   >  1:141785/1‑141 (MQ=255)                                                                                                                                           gAATCACGTTAAATTTATTAAAAATGTATACCCAGGTAATACATTGTACGTTATCGCTAAAATTACAAATAAAAAAAACAAAAAAAAAGAAAATGGACTCGTTACAGTGTCACTTTCAACATACAATGAAAATGAAGAAAt  <  2:156774/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                           GCATATAGATAAAGAAAAAGCAGAACAAAGTAGATTTAAAGGTATCATTGCATCTGGCATGCATACACTTTCAATATCATTTAAATTATGGGTAGAAGAAGGTAAATACGGAGAAGAAGTTGTAGCAGGAACACAAATGAATAACGTTAAATTTATTAAACCTGTATACCCAGGTAATACATTGTACGTTATCGCTGAAATTACAAATAAGAAATCCATAAAAAAAGAAAATGGACTCGTTACAGTGTCACTTTCAACATACAATGAAAATGAAGAAAT  >  CP000730/38760‑39038

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.