Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP000730	2,352,815	G→A	84.5%	A92V (GCA→GTA)	rpsI ←	ribosomal protein S9

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000730	2,352,815	0	G	A	84.5%	211.7 / 29.9	100	A92V (GCA→GTA)	rpsI	ribosomal protein S9
Reads supporting (aligned to +/- strand):  ref base G (9/7);  new base A (51/32);  total (61/39)
Fisher's exact test for biased strand distribution p-value = 7.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.88e-01

CGTCCGACAATTAACGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCAAATGGTTGGTTTAAGTCTAAA  >  CP000730/2352681‑2352949                                                                                                                                       |                                                                                                                                       cGTCCGACAATTATCGTTTTGAGAATTGAGGTGTACGATGAGATGTTTTAAAACCTGGTTTTTTCACTGCTGTCGTTCGTAGGTTAGTAATAGTTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCta                                                                                                                                  <  1:249888/141‑1 (MQ=16) cGTCCGACAATTAAAGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGCTCACGAGGAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCtt                                                                                                                                  >  1:554817/1‑140 (MQ=255)   tCCGACAATTAACGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCGGCTTCtaat                                                                                                                                >  2:1034685/1‑141 (MQ=255)      gACAATTAACGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTCAAGAACCTCTGTGTTCAGGATCTACTTCTaataat                                                                                                                             >  2:297347/1‑141 (MQ=255)       aCAATTAACGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTATTTTTTTTTTTAAGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTaataatt                                                                                                                            >  2:508762/1‑140 (MQ=37)       aCAATTAACGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTaataata                                                                                                                            >  1:11966/1‑140 (MQ=255)        cAATTAACGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTCAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGc                                                                                                                           >  2:90696/1‑141 (MQ=255)           ttAACGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACg                                                                                                                        >  1:763220/1‑141 (MQ=255)           ttAACGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTGTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACg                                                                                                                        >  1:704709/1‑141 (MQ=255)            tAACGTTTTGTGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTTTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGa                                                                                                                       >  2:718234/1‑141 (MQ=255)            tAACGTTTTGGGAATTGGGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCGTACGTGGGTCACGAGTAAGTAATCTAGCGTGGTTTAAAGAACCTCTGGTTTCAGGATCGACTTCTAATCATggcagg                                                                                                                       >  2:496610/1‑136 (MQ=25)            tAACGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGa                                                                                                                       >  1:626676/1‑141 (MQ=255)             aaCGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAg                                                                                                                      <  1:415762/141‑1 (MQ=255)                gTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTACTAATGCACGAGCGa                                                                                                                   >  1:973049/1‑141 (MQ=255)                gTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGa                                                                                                                   <  1:1061735/141‑1 (MQ=255)                   ttGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCCCGAGGGATTc                                                                                                                >  2:773005/1‑141 (MQ=255)                      agaATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATACTGCACGAGCGATACCGt                                                                                                             >  2:633442/1‑141 (MQ=255)                      agaATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGt                                                                                                             >  2:799291/1‑141 (MQ=255)                       gaATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTg                                                                                                            >  2:633760/1‑141 (MQ=255)                          ttGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACg                                                                                                         <  1:729880/141‑1 (MQ=255)                           tGAGGTGAACGACGAGCTGCTTTAGGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTACTCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACgg                                                                                                        >  1:775191/1‑141 (MQ=255)                           tGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTCCGTGACgg                                                                                                        <  2:8420/141‑1 (MQ=255)                            ggggTGAACGACGAGCTGCTTTAAGACCTGGTTTGTTACGTACTTTCGTAGTTGGGGCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGa                                                                                                       <  2:793389/139‑1 (MQ=255)                            gAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGa                                                                                                       <  1:908889/141‑1 (MQ=255)                             gggTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGAt                                                                                                      <  2:843160/140‑1 (MQ=255)                             aGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGAt                                                                                                      <  1:931104/141‑1 (MQ=255)                               gTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTAACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATag                                                                                                    >  2:84344/1‑141 (MQ=255)                                     gacggGCTGATTTAAGACCCGGTTTTTTGCGTTCATTCATACGTGGGTCCCGCCTATGTAACCCACCACGTTTTAAAGAAACTCTGTTAGCATGATGTACTTCTAATAATGCACGAGCGATTCCGTGACGGATagcttgag                                                                                              <  2:1018353/141‑1 (MQ=255)                                      acgaGCTGCTTTAAGACCTGTTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATagcttgagc                                                                                             <  1:661655/141‑1 (MQ=255)                                      acgaGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATagcttgagc                                                                                             >  2:248787/1‑141 (MQ=255)                                       cgaGCTGCTTGAAGACCTGTTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATagcttgagct                                                                                            <  2:323155/141‑1 (MQ=255)                                             gctTAAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCa                                                                                      >  1:759124/1‑141 (MQ=255)                                                 tAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGa                                                                                  >  1:482057/1‑141 (MQ=255)                                                 tAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGAAAAACTTGAGATTGTCCAGTGa                                                                                  >  1:571555/1‑141 (MQ=255)                                                 tAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATCCACGAGCGATTCCGTGACGGATAGCTTGAGCTTAGCCAGTGa                                                                                  >  1:594892/1‑141 (MQ=255)                                                  aaGCCCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGaa                                                                                 <  1:892936/141‑1 (MQ=255)                                                  aaGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGaa                                                                                 <  1:665831/141‑1 (MQ=255)                                                  aaGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGaa                                                                                 <  1:1056280/141‑1 (MQ=255)                                                   aGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTGGTCCATTGaaa                                                                                >  1:135131/1‑141 (MQ=255)                                                       cTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAaccac                                                                            >  2:1056980/1‑141 (MQ=255)                                                       cTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATACAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCATGACGGGTAGCTTGAGCTCGTCCAGTGAcaccac                                                                            >  2:579241/1‑141 (MQ=255)                                                        tGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCAAGCTCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAaccacc                                                                           <  2:372983/141‑1 (MQ=255)                                                         ggTTTTTTACGTGCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGCGCTTGTTCAGTGAAaccacca                                                                          <  1:553369/141‑1 (MQ=255)                                                          gTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAaccaccac                                                                         <  1:861683/141‑1 (MQ=255)                                                          gTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAaccaccac                                                                         <  2:942096/141‑1 (MQ=255)                                                          gTTTTTTACGTTCTTCCATACGTGGGTCACGAGTAAGCAATCCTGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGCGCGATTCCGTGACGGATAGCTTGAGCTTGTCCACTGAAacctccac                                                                         <  1:747702/141‑1 (MQ=255)                                                            tttttACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAAccaccacca                                                                       >  1:293609/1‑141 (MQ=255)                                                            tttttACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTAAGCTTGTCCAGTGAAAccaccacca                                                                       >  1:667622/1‑141 (MQ=255)                                                             ttttACGTTCTTTCATACGTGGGTCAAGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCAt                                                                      >  1:780404/1‑141 (MQ=255)                                                              tttACGTTCTTTCATACGTGGGTTACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATg                                                                     <  2:419743/141‑1 (MQ=255)                                                              tttACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATg                                                                     <  1:924844/141‑1 (MQ=255)                                                                tACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTGAGGATCTACTTCTAATAATGCACGCGCGATTCCGTGACGGATAGCTTGAGCTTGTCCCGTGCAACCGCCCACATGaa                                                                   >  2:367228/1‑141 (MQ=255)                                                                tACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGaa                                                                   >  2:977031/1‑141 (MQ=255)                                                                tACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTATCCAGTGAATCCACCACCATGaa                                                                   >  2:367304/1‑141 (MQ=255)                                                                 aCGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAAc                                                                  >  2:595812/1‑141 (MQ=255)                                                                   gTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGt                                                                <  2:600369/141‑1 (MQ=255)                                                                    ttCTTTCATACGTGGGACAAGAGTAAGTAATCCAGCGCATTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGTGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGtt                                                               >  1:593031/1‑141 (MQ=255)                                                                    ttCTTTCATACGTGAGTCAGGAGTAGGTAATCCAGCGCGTTTTATAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGCTTCCGTGACGGATAGCTTGAGCTTGCCCAATAAAACCACCACCATGAACGtt                                                               >  1:582645/1‑141 (MQ=255)                                                                    gtCTTTCATACGTGGGCCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGtt                                                               <  1:1030076/140‑1 (MQ=255)                                                                      cTTTCATACGTGGGTCCCGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTaa                                                             >  2:1025423/1‑141 (MQ=255)                                                                      cTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTaa                                                             <  1:972488/141‑1 (MQ=255)                                                                       tttCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAAc                                                            <  2:608299/141‑1 (MQ=255)                                                                        ttCATACGTGGGTCACGAGTAAGTAATCAAGCGCGTGTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCCACATGAACGTTCACt                                                           >  1:672474/1‑141 (MQ=255)                                                                            tACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGCTCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTaaaa                                                       >  1:410163/1‑141 (MQ=255)                                                                            tACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAGTGCACGAGCGATTCCGTGACGGATGGCTTGAGCTTGTCCCGTGGAACCACCACCATGAACCGTAACTaaaa                                                       >  1:160746/1‑141 (MQ=255)                                                                            tACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTaaaa                                                       >  1:15845/1‑141 (MQ=255)                                                                            tACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTaaaa                                                       >  1:635457/1‑141 (MQ=255)                                                                               gTGGGACACGAGTCAGTACTCCAGCGCGTTTTAAAGAACCTCTGTACTCAGGATCTGCTTCTAACAATGCACGCGCGATTCCGGGACGGATCGCTTGAGCTTGTCCAGTCAAACCACCACCATGATCTTTAACTAAAAcat                                                    <  2:209624/141‑1 (MQ=255)                                                                                tGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATACCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAAcatc                                                   <  2:459212/141‑1 (MQ=255)                                                                                  ggTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAAcatcat                                                 >  2:271089/1‑141 (MQ=255)                                                                                  ggTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAAaatcat                                                 >  1:953748/1‑141 (MQ=255)                                                                                    tcaacagtatgtaAGCTAGCGCGTTTTAAAGAATCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAg                                               <  2:389005/136‑1 (MQ=255)                                                                                    tCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAg                                               <  2:596078/141‑1 (MQ=255)                                                                                    ccaagAGTTAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAg                                               <  2:1010737/137‑1 (MQ=255)                                                                                      aCGAGTAAGTAATTCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGtt                                             >  2:912991/1‑141 (MQ=255)                                                                                      aCGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGtt                                             >  2:865133/1‑141 (MQ=255)                                                                                                     aGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGt                              <  1:724724/141‑1 (MQ=255)                                                                                                     aGCGCGTTTGAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGTTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGt                              <  1:204268/141‑1 (MQ=255)                                                                                                        gcgTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAGCCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTAc                           >  2:410319/1‑141 (MQ=255)                                                                                                        gcgTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTAc                           >  1:452931/1‑141 (MQ=255)                                                                                                         cgTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACGTTTAGTTTCAGTTACa                          >  1:871476/1‑141 (MQ=255)                                                                                                         cgTTTTAAAGAACCTCTGTATTCAGAACGAAGGAGTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTATTTTCAGTTACa                          >  1:253739/1‑141 (MQ=255)                                                                                                          gTTTTAAAGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGACACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACAt                         >  1:293024/1‑141 (MQ=255)                                                                                                             ttAAAGAACCTCTGTATTCAGGATCTGCCTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCaa                      <  1:1018309/141‑1 (MQ=255)                                                                                                              tAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGATCGATTCCGTGACGGAGAGCTTGAGCTGGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCCGTTTCAGCaaa                     >  2:435331/1‑141 (MQ=255)                                                                                                              tAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTAAGTAAATGATAGCTTCAGCCGCTCGAGTGAAACCACCACCATGGACGTTAACTGAAACATCATGGTTACCTTTAGTTTCGGTTTCATCaaa                     >  1:1046333/1‑141 (MQ=255)                                                                                                               aaaGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTCAAACATCATAGTTACCTTTAGTTTCAGTTACTTCTAAt                    >  1:589338/1‑141 (MQ=255)                                                                                                               aaaGAACCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCAAAt                    >  2:447349/1‑141 (MQ=255)                                                                                                                   aaCCTCTGTATTCAGGATCGACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCAAAtggtt                >  1:563232/1‑141 (MQ=255)                                                                                                                    aCCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCAAAtggttg               <  2:989290/141‑1 (MQ=255)                                                                                                                    aCCTCTGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCAAAtggttg               >  2:433662/1‑141 (MQ=255)                                                                                                                         tGTATTCAGGATCTCCTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGGTACCTTTAGTTCCAGTTACATCAAATGGTTGGTTTa          >  1:588089/1‑141 (MQ=255)                                                                                                                         tGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTGGTTTCAGTTACATCAAATGGTTGGTTTa          >  2:730614/1‑141 (MQ=255)                                                                                                                         tGTATTCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCAAATGGTTGGTTTa          <  2:15845/141‑1 (MQ=255)                                                                                                                             ttCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATCGCTTGAGCTTGTCCAGTGAAACCACCACCATGACCGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCAAATGGTTGGTTTAAGTc      <  2:1045798/141‑1 (MQ=255)                                                                                                                             ttCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCAAATGGTTGGTTTAAGTc      <  1:649598/141‑1 (MQ=255)                                                                                                                             ttCAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTCGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCAAATGGTTGGTTTAAGTc      <  2:657314/141‑1 (MQ=255)                                                                                                                               cAGGATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACACCAAACGGTTGGTTTAAGtata    >  2:202037/1‑141 (MQ=255)                                                                                                                                 ggATCTGCTTCTAATAATGCACGAGCGATTCCGTGACGGATGGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTCACTTTAGTTTCAGTTACATAAAAGCGTGGGATTAAGTATaaa  >  2:690323/1‑141 (MQ=255)                                                                                                                                 ggATCTACTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCAAATGGTTGGTTTAAGTCTaaa  >  2:808557/1‑141 (MQ=255)                                                                                                                                       |                                                                                                                                       CGTCCGACAATTAACGTTTTGAGAATTGAGGTGAACGACGAGCTGCTTTAAGACCTGGTTTTTTACGTTCTTTCATACGTGGGTCACGAGTAAGTAATCCAGCGCGTTTTAAAGAACCTCTGTATTCAGGATCTGCTTCTAATAATGCACGAGCGATTCCGTGACGGATAGCTTGAGCTTGTCCAGTGAAACCACCACCATGAACGTTAACTAAAACATCATAGTTACCTTTAGTTTCAGTTACATCAAATGGTTGGTTTAAGTCTAAA  >  CP000730/2352681‑2352949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑