Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP000730 111,512 A→G 37.4% S194S (TCA→TCG)  USA300HOU_0110 → possible staphylococcal tandem lipoprotein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP000730111,5120AG37.4% 47.7 / 61.1 67S194S (TCA→TCG) USA300HOU_0110possible staphylococcal tandem lipoprotein
Reads supporting (aligned to +/- strand):  ref base A (18/24);  new base G (7/18);  total (25/42)
Fisher's exact test for biased strand distribution p-value = 2.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01

TACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGTTGAAAGGTACAGGGAATTTAAAAGGTTCATCAGTTGGA  >  CP000730/111374‑111641
                                                                                                                                          |                                                                                                                                 
tACTGAGGAAGTCAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAg                                                                                                                                  <  2:396637/140‑1 (MQ=255)
 aCTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAATGGTGCCGAGTTATTAAga                                                                                                                                 >  1:265997/1‑139 (MQ=255)
 aCTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGAAATATCATATAATCCAGTGGTGCTGAGTTATTCGGc                                                                                                                                 <  2:459697/140‑1 (MQ=255)
    gAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCa                                                                                                                              <  2:537279/140‑1 (MQ=255)
     aGGAACTGAAAGAAAAAAAAAAAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCaa                                                                                                                             <  2:36342/140‑1 (MQ=21)
          gTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATGTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCa                                                                                                                        <  1:70591/140‑1 (MQ=255)
             aaaGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAAtt                                                                                                                     <  1:248645/140‑1 (MQ=255)
              aagaagAAAACCTAAAAAAAGAAATCGAAAACGTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTa                                                                                                                    <  2:309270/140‑1 (MQ=18)
              aagaagAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATAAATTa                                                                                                                    >  2:385277/1‑140 (MQ=255)
                gaataaAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAAc                                                                                                                  <  1:518097/140‑1 (MQ=255)
                gaagaaAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAAc                                                                                                                  >  1:529735/1‑140 (MQ=255)
                 aagaaAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTTCTCTATATTTAAATATTAAAGATTTAATGAATTATAAAGATGGAGATATAGCATATAATCCAGAAGTCTCGAGTTATTCGGCTAAAGATCAATTAACt                                                                                                                 >  2:204320/1‑140 (MQ=14)
                 aagaaAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACt                                                                                                                 <  1:370919/140‑1 (MQ=255)
                   gaaAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTaa                                                                                                               <  1:503062/140‑1 (MQ=255)
                   gaaAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTaa                                                                                                               >  2:468747/1‑140 (MQ=255)
                    aaaaCATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAat                                                                                                              <  2:326125/140‑1 (MQ=255)
                      aaCATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGATATATATCATATAATCAAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAatga                                                                                                            >  1:43450/1‑140 (MQ=255)
                       aaaTAAAAAAAGAAATCGAAGACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAatgat                                                                                                           <  2:516046/138‑1 (MQ=255)
                       aCATAAAAAAAGAAATCGAAAACTTTAAGTTTTCTGCGTAAAAGGGAACTTTTGAAGATTTAATGCATTATAAAGATGGAGATATATCATATAATCCAGAGGTACCGAGTTATTCGGCTAAATATCAATTAACTAatgat                                                                                                           >  1:265024/1‑140 (MQ=14)
                        caaaaaaaaaGAAAACGAAAAATTTAAGGTTCTTGCGCAAAAGAGCAATTTCAAAGATTTAAGGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCAGAGTTATTCAGCTCAATATCAATTAACTAatgatg                                                                                                          <  2:242801/137‑1 (MQ=18)
                        cATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAatgatg                                                                                                          <  1:60295/140‑1 (MQ=255)
                        cATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTAAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAatgctg                                                                                                          >  2:369079/1‑140 (MQ=255)
                         aaaaaaaaaGAAAGCGAAAAATTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGTTCTATCTTATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAAtgatga                                                                                                         <  1:290023/138‑1 (MQ=21)
                         aTAAAAAAAGAAATAGTAAACTCTAAGTGTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATATAGATGGAGATATATCATATAAGCCAGAGGTGCCGACTTATTCAGCTCAATATCAATTAACTAAtgatga                                                                                                         <  2:158909/140‑1 (MQ=18)
                          tAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCCATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGATATTCGGCTAAATATCAATTAACTAATgatgat                                                                                                        >  1:99619/1‑140 (MQ=255)
                             aaaaaGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATtat                                                                                                     <  1:387081/140‑1 (MQ=255)
                                 ggAATTCTAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATAACAATTAACTAATGATGATTATAATg                                                                                                 >  2:142812/2‑140 (MQ=18)
                                 agtaatagaattcTTTAAGATTTTTGCGCAATATAGCAATTTTATAGATTTAATGAATTATACAGATGGGGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATg                                                                                                 <  2:541101/128‑1 (MQ=18)
                                 acaaaTCTATAACTTTAAGTTTTTTGCACAATATGGCTATTTTAATCAGTTAATGATTTTTATAGTTGGAGATATATCATAGAATCCAGAGGTGCCGAGTTAGTCGGCTAAATATCAATGAACTAATGATGATTATAATg                                                                                                 <  1:195674/138‑1 (MQ=14)
                                 aGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATg                                                                                                 <  1:167452/140‑1 (MQ=255)
                                   aattCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTa                                                                                               <  2:183423/137‑1 (MQ=255)
                                     aTCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTTAAGATTTAATGAATTATAAAGATTGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTaaa                                                                                             <  2:518185/140‑1 (MQ=255)
                                     aTCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTaaa                                                                                             >  2:291753/1‑140 (MQ=255)
                                      tCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTaaaa                                                                                            <  1:506209/140‑1 (MQ=255)
                                           aaCTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTACTGAATTATAAAGATGGAGATATATCATATAATACAGAGGTTCCGAGTTATTCAGCCCAATATCAATTAACTAATAATGTTTATAATGTAAAACAAtt                                                                                       >  1:199829/1‑140 (MQ=255)
                                             cTTTATGTTTTTTGCGCAATATTGGTATTTTTATGATTTTATGATTTATAAAGATGGAGATATATCATATAGTCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAAAACAATTAc                                                                                     <  1:252393/140‑1 (MQ=14)
                                             cTTTAAGTTTTTTGCCCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAAAACAATTAc                                                                                     <  1:29332/140‑1 (MQ=255)
                                                tAAGTTTTTTGCGCAATTTTGGAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACgca                                                                                  <  2:495868/140‑3 (MQ=17)
                                                tAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACgca                                                                                  <  2:388604/140‑3 (MQ=255)
                                                         ttcgcAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATg                                                                         <  1:447401/138‑1 (MQ=255)
                                                         tGCGCAATTGAGCAATTTTTAAACTTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGCAAAAGATATg                                                                         <  1:370207/140‑1 (MQ=14)
                                                         tGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCGGCTAAATATCAATTAACTAATGATGATTATAATGTAATACAATTACGCAAAAGATATg                                                                         <  1:334040/140‑1 (MQ=17)
                                                         tGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATg                                                                         <  1:278094/140‑1 (MQ=255)
                                                         ggcgcAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATg                                                                         <  2:60147/139‑1 (MQ=255)
                                                                 ataGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTTCCGAGTTATTCGGCTAAATATCAAATTACTAATGAGGAATTTAAATGAAAACAATTAAGCAAAAGATATgcatatgtt                                                                 >  2:290725/1‑132 (MQ=14)
                                                                   aGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGTTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACcaac                                                               <  1:348031/140‑1 (MQ=255)
                                                                             aaGATTTAATGAATCATAAGGATGGAGATATATCATATAATCCACAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAgcg                                                     >  1:302381/1‑140 (MQ=255)
                                                                              aGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAAGAATTACGTAAAAGATATGACATACCAACCAATAAAgcgc                                                    >  2:160426/1‑140 (MQ=255)
                                                                              aGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAgcgc                                                    >  1:449891/1‑140 (MQ=255)
                                                                                aTTAAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCg                                                  <  2:481761/140‑1 (MQ=255)
                                                                                 tttAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGa                                                 >  1:284125/1‑140 (MQ=255)
                                                                                 tttAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGa                                                 <  2:155972/140‑1 (MQ=255)
                                                                                      tGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCGATTAACTAATGAAGATTATAATGTAAAACAATTACGAAAAAGATATGACATAACAAGGAAAAAAACGCCGAAgaag                                            >  2:408614/1‑137 (MQ=17)
                                                                                      tGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCtg                                            <  1:444282/140‑1 (MQ=255)
                                                                                          ttATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCtgttgt                                        <  1:535356/140‑1 (MQ=255)
                                                                                            ataAAGATTGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGttgttg                                      <  1:84710/140‑1 (MQ=255)
                                                                                                  aTGGAGATATATCATATAATCCAGAGGTGCAGAGTTAGTCAGCTCAATATCAATTAACTAATGATGATTATAATTTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGTTGAAAGGt                                <  2:265997/140‑1 (MQ=255)
                                                                                                      agaTATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGTTGAAAGGTACAg                            >  2:317976/1‑140 (MQ=255)
                                                                                                       gaTATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGTTGAAAGGTACAgg                           >  1:78145/1‑140 (MQ=255)
                                                                                                       gaTATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGAGCCGAAGCTGTTGTTGAAAGGTAAAga                           >  1:78121/1‑139 (MQ=255)
                                                                                                               atatAATCCATATGTGTCGAGTTATTCAGCTCAATATTTATTAACTTATGACGATTATAATGTAAAACAATTACGTAAAAGATAGTACATACCAACAAATAAAGCGCTGAAGCTGTTGTTGAAAGGTACAGGTAATTTaa                   <  2:75311/140‑1 (MQ=14)
                                                                                                                 ataATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGTGGAAAGGTACAGGGAATCTaaaa                 >  2:131860/1‑140 (MQ=255)
                                                                                                                 ataATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGATGTTGTTGAAAGGTACAGGGAATTTaaaa                 >  2:181528/1‑140 (MQ=255)
                                                                                                                   aaTTCAGAGGTGCCGAGTTATTCAGCTCAATATCCATTAATTAATGAGGATTATAATGTAAAATGATTACGTAATAGATATGACATTCCAACTAATAGATCGCCGAAGCTGTTGTTGAAAGGTACAGGGAATTTAAAAgg               <  2:429571/140‑1 (MQ=14)
                                                                                                                    aTCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGTTGAAAGGTACAGGGAATTTAAAAGGt              >  2:13791/1‑140 (MQ=255)
                                                                                                                       cAGAGGTGCCGAGTTATGCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGTTGAAAGGTACAGGGAATTTAAAAGGTtca           <  1:82478/140‑1 (MQ=255)
                                                                                                                                cGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGGAAACCAACTACGTAAACGATATGACATACCAACAAATAAAGCGCCGAAGTTGTTGTTGAAAGGTGCAGGGAATTTGAAAGGACACTCAGTTGGa  >  2:323044/1‑140 (MQ=14)
                                                                                                                                          |                                                                                                                                 
TACTGAGGAAGTTAAAGAAGAAAACATAAAAAAAGAAATCGAAAACTTTAAGTTTTTTGCGCAATATAGCAATTTTAAAGATTTAATGAATTATAAAGATGGAGATATATCATATAATCCAGAGGTGCCGAGTTATTCAGCTCAATATCAATTAACTAATGATGATTATAATGTAAAACAATTACGTAAAAGATATGACATACCAACAAATAAAGCGCCGAAGCTGTTGTTGAAAGGTACAGGGAATTTAAAAGGTTCATCAGTTGGA  >  CP000730/111374‑111641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑