New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1823910	42 (0.910)	4 (0.090)	4/586	5.9	9.1%	coding (396/888 nt)	cho	endonuclease of nucleotide excision repair
	?	NC_000913	= 1823940	39 (0.860)					coding (426/888 nt)	cho	endonuclease of nucleotide excision repair
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

ATCCGCAGCCGCGTCCTTTCTCATTTACGTACCCCGGATGAAGCCGCCATGCTACGGCAATCCCGACGGATCAGCTGGATATGTACCGCCGGTGAAATCGGCGCTCTGCTCCTTGAAGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGGTGTATGCCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1823683‑1823910 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaaCAGGTTGGGGGCTCGTGAAAAATCCACCTCTTTGGCATACACCACATCGACGCGCTTTTCATTTAATTGCAGGGCACAGAGCTGGCGATTGCGGCGCAACCGTTTATTAAACAGCGGCTGTTGTTCTTTGATTAATCGCGCTTCAAGGAGCAGAGCGCCGATTTCACCGGCGGTACATATCCAGCTGATCCGTCGGGATTGCCGTAGCATGGCGGCTTCATCCGGGGTACGTAAATGAGAAAGGACGCGGCTGCGGATGTTAACGCTTTTGCCGATATAGAGCGGCATGGTGTCACTT  <  NC_000913/1823940‑1823643                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATCCGCAGCCGCGTCCTTTCTCATTTACGTACCCCGGATGAAGCCGCCATGCTACGGCAATCCCGACGGATCAGCTGGATATGTACCGCCGGTGAAATCGGCGCTCTGCTCCTTGAAGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGGTGTATGCCAAACAGGTTGGGGGCTCGTGAAAAGTCCACCTCTTTGGCATACACCACATCGACGCGCTTTTCATTTAATTGCAGG                                                                                                                                                                                                                                   >  2:108177/1‑301              cCCTTTCTCATTGACGTACCCCGGAGTAAGCGTCCAGGCTACGGCAATCCCGACGGATCAGCTGGATAGGTACCGCGGGGGAAGTCGGCGCTCTGCTCCTTGAAGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAAGCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGGTGTATGCCAAACAGGTTGGGGGCTCGTGAAAAGTCCACCTCTTTGGCATACACCACATCGACGCGCTTTTCATTTAATTGCAGGGCACAGAGCTGGC                                                                                                                                                                                                                      <  1:108055/300‑1                                                                                                                                                                                 GCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGGTGTATGCCAAACAGGTTGGGGGCTCGTGAAAAATCCACCTCTTTGGCATACACCACATCGACGCGCTTTTCATTTAATTGCAGGGCACAGAGCTGGCGATTGCGGCGCAACCGTTTATTAAACAGCGGCTGTTGTTCTTTGATTAATCGCGCTTCAAGGAGCAGAGCGCCGATTTCACCGGCGGTACATATCCAGCTGATCCGTCGGGATTGCCGTAGCATGGCGGCTTCATCCGGGGTACGTAAATGAGAAAGGACGCG                                                   >  2:445271/1‑301                                                                                                                                                                                                         cccctacacgacgctcttccgatctAAACAGGTTAGGGGCTCGTGAAAAATCCACCCCTTTGGCATACACCACATCGACGCGCTTTTCATTTAATTGCAGGGCACAGAGCTGGCGATTGCGGCGCAACCGTTTATTAAACAGCGGCTGTTGTTCTTTGATTAATCGCGCTTCAAGGAGCAGAGCGCCGATTTCACCGGCGGTACATATCCAGCTGATCCGTCGGGATTGCCGTAGCATGGCGGCTTCATCCGGGGTACGTAAATGAGAAAGGACGCGGCTGCGGATGTTAACGCTTTTGCC                           <  1:214762/276‑1                                                                                                                                                                                                             ggggtatgtgtgggtgATGCCAAACAGGTTTGGGGCTCGGCAAAAATCCACCGCTTGGGCATACACCAAATCGACGCGCTTTTCATTTAATTGCAGGGCACAGAGCTGGCGATTGCGGCGCAACCGTTTATTAAACAGCGGCTGTTGTTCTTTGATTAATCGCGCTTCAAGGAGCAGAGCGCCGATTTCACCGGCGGTACATATCCAGCTGATCCGTCGGGATTGCCGTAGCATGGCGGCTTCATCCGGGGTACGTAAATGAGAAAGGACGCGGCTGCGGATGTTAACGCTTTTGCCGAT                        <  1:444722/284‑1                                                                                                                                                                                                                               gcgAAACAGGTTGGAGGCTGATGAAAAATCCGCATCTTTGGCATACGCCATATAGACGCGCTTTTCATTTAATTGCAGGGCACAGAGCTGGCGATTGCGGCGCAACCGTTTATTAAACAGCGGCTGTTGTTCTTTGATTAATCGCGCTTCAAGGAGCAGAGCGCCGATTTCACCGGCGGTACATATCCAGCTGATCCGTCGGGATTGCCGTAGCATGGCGGCTTCATCCGGGGTACGTAAATGAGAAAGGACGCGGCTGCGGATGTTAACGCTTTTGCCGATATAGAGCGGCATGGTGT       <  1:54593/296‑1                                                                                                                                                                                                                                  AAACAGGTTGGGGGCTCGTGAAAAATCCACCTCTTTGGCATACACCACATCGACGCGCTTTTCATTTAATTGCAGGGCACAGAGCTGGCGATTGCGGCGCAACCGTTTATTAAACAGCGGCTGTTGTTCTTTGATTAATCGCGCTTCAAGGAGCAGAGCGCCGATTTCACCGGCGGTACATATCCAGCTGATCCGTCGGGATTGCCGTAGCATGGCGGCTTCATCCGGGGTACGTAAATGAGAAAGGACGCGGCTGCGGATGTTAACGCTTTTGCCagatcggaagggcacacgtctgcaa  >  2:214992/1‑276                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATCCGCAGCCGCGTCCTTTCTCATTTACGTACCCCGGATGAAGCCGCCATGCTACGGCAATCCCGACGGATCAGCTGGATATGTACCGCCGGTGAAATCGGCGCTCTGCTCCTTGAAGCGCGATTAATCAAAGAACAACAGCCGCTGTTTAATAAACGGTTGCGCCGCAATCGCCAGCTCTGTGCCCTGCAATTAAATGAAAAGCGCGTCGATGTGGTGTATGCCAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1823683‑1823910 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaaaCAGGTTGGGGGCTCGTGAAAAATCCACCTCTTTGGCATACACCACATCGACGCGCTTTTCATTTAATTGCAGGGCACAGAGCTGGCGATTGCGGCGCAACCGTTTATTAAACAGCGGCTGTTGTTCTTTGATTAATCGCGCTTCAAGGAGCAGAGCGCCGATTTCACCGGCGGTACATATCCAGCTGATCCGTCGGGATTGCCGTAGCATGGCGGCTTCATCCGGGGTACGTAAATGAGAAAGGACGCGGCTGCGGATGTTAACGCTTTTGCCGATATAGAGCGGCATGGTGTCACTT  <  NC_000913/1823940‑1823643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.