| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_000913 | 3,424,968 | 0 | G→T | 100.0% | 0.1 | 1 | noncoding (1816/2904 nt) | rrlD | 23S ribosomal RNA of rrnD operon |
| Rejected: E-value exceeds prediction threshold. | ||||||||||
| Reads supporting (aligned to +/- strand): new base (1/0): ref base (0/0): total (1/0) | ||||||||||
CAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCG‑CTTGC‑GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTC > NC_000913/3424766‑3425063 | cAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGACATCATTCCGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTCGGACCGTTAGAGTTACGCCCGCCGGTTACCGGCGCTGCGATCACGGGCTTCGCCTTGCGGCTAACCCCATCAATGAACCTTACGGCACCGGGCAGGCGTCACGGCGTACGCTTCCACTCTCATGTTTGCACAGTGCGTGGTGTGTACTAAACAGTTCCCGCCAGCGAGTATAGTCGCATGCTTTCTACTCCCCTAGCacggcgatac > 2:616009/1‑291 (MQ=2) | CAATTTCACTGAGTCTCGGGTGGAGACAGCCTGGCCATCATTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCG‑CTTGC‑GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCGTATACGTCCACTTTCGTGTTTGCACAGTGCTGTGTTTTTAATAAACAGTTGCAGCCAGCTGGTATCTTCGACTGATTTCAGCTCCACGAGCAAGTCGCTTC > NC_000913/3424766‑3425063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |